RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 TATP17735 454 aaPredicted RBP21.64■■□□□ 1.05
UBL3-201ENST00000380680 CSPP1Q1MSJ5 1256 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 LRRCC1Q9C099 1032 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 TNNQ9UQP3 1299 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.05
UBL3-201ENST00000380680 CCDC27Q2M243 656 aa21.63■■□□□ 1.05
UBL3-201ENST00000380680 TOMM22Q9NS69 142 aa21.63■■□□□ 1.05
UBL3-201ENST00000380680 F6X3S4 739 aa21.63■■□□□ 1.05
UBL3-201ENST00000380680 IL16Q14005 1332 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 RIMS2Q9UQ26 1411 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 A0A1W2PP64 1363 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 NEUROD6Q96NK8 337 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 MCTP1Q6DN14 999 aa21.62■■□□□ 1.05
UBL3-201ENST00000380680 GOLGA6L6A8MZA4 724 aa21.61■■□□□ 1.05
UBL3-201ENST00000380680 RABEP1Q15276 862 aa21.61■■□□□ 1.05
UBL3-201ENST00000380680 IL1RAPL2Q9NP60 686 aa21.61■■□□□ 1.05
UBL3-201ENST00000380680 BTBD11A6QL63 1104 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 NCKAP5LQ9HCH0 1330 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 NPC1L1Q9UHC9 1359 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 SRGAP3O43295 1099 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 RNF20Q5VTR2 975 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 FAM184AQ8NB25 1140 aa21.6■■□□□ 1.05
UBL3-201ENST00000380680 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 KCNH5Q8NCM2 988 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 KIF3AQ9Y496 699 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 NRDCO43847 1150 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 TRAK2O60296 914 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 RLBP1P12271 317 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 TTC21BQ7Z4L5 1316 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 H3BQV1 296 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 PHF14O94880 888 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 IFFO2Q5TF58 517 aa21.59■■□□□ 1.05
UBL3-201ENST00000380680 TAF7Q15545 349 aaPredicted RBP21.58■■□□□ 1.04
UBL3-201ENST00000380680 DMRT2Q9Y5R5 561 aa21.58■■□□□ 1.04
UBL3-201ENST00000380680 PPIP5K1Q6PFW1 1433 aa21.57■■□□□ 1.04
UBL3-201ENST00000380680 SMARCA5O60264 1052 aaPredicted RBP21.57■■□□□ 1.04
UBL3-201ENST00000380680 AEBP1Q8IUX7 1158 aa21.57■■□□□ 1.04
UBL3-201ENST00000380680 STRN4Q9NRL3 753 aa21.57■■□□□ 1.04
UBL3-201ENST00000380680 SMC3Q9UQE7 1217 aa21.57■■□□□ 1.04
UBL3-201ENST00000380680 MYL6BP14649 208 aa21.57■■□□□ 1.04
UBL3-201ENST00000380680 VPS37CA5D8V6 355 aaPredicted RBP21.57■■□□□ 1.04
UBL3-201ENST00000380680 FSD1Q9BTV5 496 aa21.56■■□□□ 1.04
UBL3-201ENST00000380680 PHACTR3Q96KR7 559 aa21.56■■□□□ 1.04
UBL3-201ENST00000380680 YTHDC2Q9H6S0 1430 aaKnown RBP21.56■■□□□ 1.04
UBL3-201ENST00000380680 MYO5CQ9NQX4 1742 aa21.55■■□□□ 1.04
UBL3-201ENST00000380680 SIL1Q9H173 461 aa21.55■■□□□ 1.04
UBL3-201ENST00000380680 MAP4K4O95819 1239 aaPredicted RBP21.54■■□□□ 1.04
UBL3-201ENST00000380680 TTC37Q6PGP7 1564 aa21.54■■□□□ 1.04
UBL3-201ENST00000380680 CHAF1AQ13111 956 aaPredicted RBP21.54■■□□□ 1.04
UBL3-201ENST00000380680 LRRFIP1Q32MZ4 808 aaKnown RBP21.54■■□□□ 1.04
UBL3-201ENST00000380680 SF3A1Q15459 793 aaKnown RBP21.54■■□□□ 1.04
UBL3-201ENST00000380680 RNF123Q5XPI4 1314 aa21.53■■□□□ 1.04
UBL3-201ENST00000380680 TOM1L2Q6ZVM7 507 aa21.53■■□□□ 1.04
UBL3-201ENST00000380680 PRDM11Q9NQV5 511 aa21.53■■□□□ 1.04
UBL3-201ENST00000380680 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.53■■□□□ 1.04
UBL3-201ENST00000380680 ATP10AO60312 1499 aa21.53■■□□□ 1.04
UBL3-201ENST00000380680 K7ELQ4 463 aaPredicted RBP21.53■■□□□ 1.04
UBL3-201ENST00000380680 NPATQ14207 1427 aa21.53■■□□□ 1.04
UBL3-201ENST00000380680 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
UBL3-201ENST00000380680 CABP4P57796 275 aa21.52■■□□□ 1.04
UBL3-201ENST00000380680 SPG7Q9UQ90 795 aa21.52■■□□□ 1.04
UBL3-201ENST00000380680 MPRIPQ6WCQ1 1025 aa21.52■■□□□ 1.04
UBL3-201ENST00000380680 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
UBL3-201ENST00000380680 ISY1Q9ULR0 285 aaKnown RBP21.52■■□□□ 1.04
UBL3-201ENST00000380680 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
UBL3-201ENST00000380680 PTPRTO14522 1441 aa21.51■■□□□ 1.03
UBL3-201ENST00000380680 ZMYM3Q14202 1370 aa21.51■■□□□ 1.03
UBL3-201ENST00000380680 APPP05067 770 aa21.51■■□□□ 1.03
UBL3-201ENST00000380680 TSPYL6Q8N831 410 aa21.5■■□□□ 1.03
UBL3-201ENST00000380680 ERC1Q8IUD2 1116 aa21.5■■□□□ 1.03
UBL3-201ENST00000380680 PLA2R1Q13018 1463 aa21.5■■□□□ 1.03
UBL3-201ENST00000380680 FLIIQ13045 1269 aa21.5■■□□□ 1.03
UBL3-201ENST00000380680 KDM5CP41229 1560 aa21.49■■□□□ 1.03
UBL3-201ENST00000380680 MCM2P49736 904 aa21.48■■□□□ 1.03
UBL3-201ENST00000380680 HDAC1Q13547 482 aaPredicted RBP21.48■■□□□ 1.03
UBL3-201ENST00000380680 DNAJC2Q99543 621 aaKnown RBP21.48■■□□□ 1.03
UBL3-201ENST00000380680 TBC1D2Q9BYX2 928 aa21.48■■□□□ 1.03
UBL3-201ENST00000380680 NUTM1Q86Y26 1132 aa21.48■■□□□ 1.03
UBL3-201ENST00000380680 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
UBL3-201ENST00000380680 ARHGAP45Q92619 1136 aa21.48■■□□□ 1.03
UBL3-201ENST00000380680 RBM42Q9BTD8 480 aaKnown RBP21.48■■□□□ 1.03
UBL3-201ENST00000380680 ABCC1P33527 1531 aa21.47■■□□□ 1.03
UBL3-201ENST00000380680 MCM4P33991 863 aa21.47■■□□□ 1.03
UBL3-201ENST00000380680 BRPF3Q9ULD4 1205 aa21.46■■□□□ 1.03
UBL3-201ENST00000380680 PTPRCP08575 1304 aa21.46■■□□□ 1.03
UBL3-201ENST00000380680 VAMP4O75379 141 aa21.46■■□□□ 1.03
UBL3-201ENST00000380680 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
UBL3-201ENST00000380680 C8orf34Q49A92 452 aa21.46■■□□□ 1.03
UBL3-201ENST00000380680 LRRFIP2Q9Y608 721 aaKnown RBP21.46■■□□□ 1.03
UBL3-201ENST00000380680 ERCC6L2Q5T890 1561 aa21.45■■□□□ 1.03
UBL3-201ENST00000380680 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
UBL3-201ENST00000380680 PRPF40AO75400 957 aaKnown RBP21.45■■□□□ 1.02
UBL3-201ENST00000380680 MX1P20591 662 aa21.45■■□□□ 1.02
UBL3-201ENST00000380680 KRT24Q2M2I5 525 aa21.45■■□□□ 1.02
UBL3-201ENST00000380680 CAVIN1Q6NZI2 390 aaKnown RBP21.45■■□□□ 1.02
UBL3-201ENST00000380680 AACSQ86V21 672 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms