RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NEUROD6Q96NK8 337 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 INCENPQ9NQS7 918 aa20.2■□□□□ 0.82
COL4A3BP-203ENST00000380494 NEMFO60524 1076 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 EHBP1L1Q8N3D4 1523 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 MCM3P25205 808 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 CCDC102AQ96A19 550 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 KIF18AQ8NI77 898 aa20.19■□□□□ 0.82
COL4A3BP-203ENST00000380494 ZSCAN12O43309 604 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 GIMAP7Q8NHV1 300 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 GAS2L2Q8NHY3 880 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 STIM1Q13586 685 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 GGNBP2Q9H3C7 697 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 ERBINQ96RT1 1412 aa20.18■□□□□ 0.82
COL4A3BP-203ENST00000380494 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
COL4A3BP-203ENST00000380494 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
COL4A3BP-203ENST00000380494 BRPF1P55201 1214 aaPredicted RBP20.17■□□□□ 0.82
COL4A3BP-203ENST00000380494 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
COL4A3BP-203ENST00000380494 CEBPZQ03701 1054 aaKnown RBP20.17■□□□□ 0.82
COL4A3BP-203ENST00000380494 CLCN1P35523 988 aa20.16■□□□□ 0.82
COL4A3BP-203ENST00000380494 PRDM10Q9NQV6 1147 aa20.16■□□□□ 0.82
COL4A3BP-203ENST00000380494 NUTM2FA1L443 756 aa20.16■□□□□ 0.82
COL4A3BP-203ENST00000380494 CCDC148Q8NFR7 591 aa20.16■□□□□ 0.82
COL4A3BP-203ENST00000380494 MAP9Q49MG5 647 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 MPNDQ8N594 471 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 CCDC43Q96MW1 224 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 XPCQ01831 940 aaPredicted RBP20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 KRT32Q14532 448 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 UVSSAQ2YD98 709 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 RPAP2Q8IXW5 612 aaPredicted RBP20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 DHX29Q7Z478 1369 aaKnown RBP20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
COL4A3BP-203ENST00000380494 PRKAR2BP31323 418 aa20.14■□□□□ 0.81
COL4A3BP-203ENST00000380494 PLCD4Q9BRC7 762 aa20.14■□□□□ 0.81
COL4A3BP-203ENST00000380494 PTPRGP23470 1445 aa20.14■□□□□ 0.81
COL4A3BP-203ENST00000380494 POTEB2H3BUK9 544 aa20.13■□□□□ 0.81
COL4A3BP-203ENST00000380494 SKIDA1Q1XH10 827 aa20.13■□□□□ 0.81
COL4A3BP-203ENST00000380494 FANCD2Q9BXW9 1451 aa20.13■□□□□ 0.81
COL4A3BP-203ENST00000380494 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
COL4A3BP-203ENST00000380494 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
COL4A3BP-203ENST00000380494 NKTRP30414 1462 aaKnown RBP20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 CDKL5O76039 1030 aa20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 BLOC1S2Q6QNY1 142 aa20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 DNAJC2Q99543 621 aaKnown RBP20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 SFPQP23246 707 aaKnown RBP eCLIP20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 TBC1D2Q9BYX2 928 aa20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 DDX11Q96FC9 970 aa20.12■□□□□ 0.81
COL4A3BP-203ENST00000380494 ANKRD18AQ8IVF6 992 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 CASQ1P31415 396 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 NBPF8Q3BBV2 869 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 PPP4R3BQ5MIZ7 849 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 FAM177A1Q8N128 213 aaPredicted RBP20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 CRACR2AQ9BSW2 395 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 EPB41L2O43491 1005 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 CCDC184Q52MB2 194 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 ANO10Q9NW15 660 aa20.11■□□□□ 0.81
COL4A3BP-203ENST00000380494 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
COL4A3BP-203ENST00000380494 TRIM22Q8IYM9 498 aa20.1■□□□□ 0.81
COL4A3BP-203ENST00000380494 CABP2Q9NPB3 220 aa20.1■□□□□ 0.81
COL4A3BP-203ENST00000380494 TIAM1Q13009 1591 aa20.1■□□□□ 0.81
COL4A3BP-203ENST00000380494 CCAR1Q8IX12 1150 aaKnown RBP20.1■□□□□ 0.81
COL4A3BP-203ENST00000380494 CTAGE5O15320 804 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 MICALCLQ6ZW33 695 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 SCAND2PQ9GZW5 306 aaPredicted RBP20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 STK3Q13188 491 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 ARHGAP29Q52LW3 1261 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 FAM193AP78312 1265 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 TNNT1P13805 278 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 CTDP1Q9Y5B0 961 aaPredicted RBP20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 PAXBP1Q9Y5B6 917 aa20.09■□□□□ 0.81
COL4A3BP-203ENST00000380494 SYCP1Q15431 976 aa20.08■□□□□ 0.81
COL4A3BP-203ENST00000380494 JAKMIP1Q96N16 626 aaKnown RBP20.08■□□□□ 0.81
COL4A3BP-203ENST00000380494 GSDMDP57764 484 aa20.08■□□□□ 0.8
COL4A3BP-203ENST00000380494 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.08■□□□□ 0.86e-7■□□□□ 10.9
COL4A3BP-203ENST00000380494 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.8
COL4A3BP-203ENST00000380494 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.8
COL4A3BP-203ENST00000380494 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 SLC3A2P08195 630 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 NOL7Q9UMY1 257 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 KLHL40Q2TBA0 621 aa20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 SH2B1Q9NRF2 756 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-203ENST00000380494 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-203ENST00000380494 KIF5CO60282 957 aa20.06■□□□□ 0.8
COL4A3BP-203ENST00000380494 RAD21O60216 631 aa20.06■□□□□ 0.8
COL4A3BP-203ENST00000380494 BMS1Q14692 1282 aaKnown RBP20.06■□□□□ 0.8
COL4A3BP-203ENST00000380494 ZFYVE27Q5T4F4 411 aa20.06■□□□□ 0.8
COL4A3BP-203ENST00000380494 SEPT7Q16181 437 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 CCDC158Q5M9N0 1113 aa20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 TIGD1Q96MW7 591 aa20.05■□□□□ 0.8
COL4A3BP-203ENST00000380494 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms