RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
NHLRC3-202ENST00000379600 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
NHLRC3-202ENST00000379600 ZFYVE9O95405 1425 aa11.67□□□□□ -0.54
NHLRC3-202ENST00000379600 PRKAR2BP31323 418 aa11.67□□□□□ -0.54
NHLRC3-202ENST00000379600 REREQ9P2R6 1566 aa11.67□□□□□ -0.54
NHLRC3-202ENST00000379600 FCHSD2O94868 740 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 TMEM131LA2VDJ0 1609 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 IDI1Q13907 227 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 SKOR2Q2VWA4 1001 aaPredicted RBP11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 PRAM1Q96QH2 718 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 PPP1R9BQ96SB3 815 aa11.66□□□□□ -0.54
NHLRC3-202ENST00000379600 ARHGAP45Q92619 1136 aa11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 YTHDC2Q9H6S0 1430 aaKnown RBP11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 BAG4O95429 457 aaKnown RBP11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 HSP90AA1P07900 732 aaKnown RBP11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 ZNF853P0CG23 659 aa11.65□□□□□ -0.54
NHLRC3-202ENST00000379600 ZNF428Q96B54 188 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 MBIPQ9NS73 344 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 TERF2IPQ9NYB0 399 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 PKP1Q13835 747 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 PLEKHM2Q8IWE5 1019 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 IBTKQ9P2D0 1353 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 ELL2O00472 640 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 RRP9O43818 475 aaKnown RBP11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 CYP2E1P05181 493 aaPredicted RBP11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 HMOX1P09601 288 aa11.64□□□□□ -0.55
NHLRC3-202ENST00000379600 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 KLHL40Q2TBA0 621 aa11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 CABP1Q9NZU7 370 aa11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 CDC45O75419 566 aa11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 HSP90AA2PQ14568 343 aaPredicted RBP11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 C16orf71Q8IYS4 520 aaPredicted RBP11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
NHLRC3-202ENST00000379600 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
NHLRC3-202ENST00000379600 TRIM44Q96DX7 344 aaPredicted RBP11.62□□□□□ -0.55
NHLRC3-202ENST00000379600 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
NHLRC3-202ENST00000379600 CDK19Q9BWU1 502 aa11.62□□□□□ -0.55
NHLRC3-202ENST00000379600 PTMSP20962 102 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 CCDC173Q0VFZ6 552 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 IFT57Q9NWB7 429 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 RGS12O14924 1447 aa11.61□□□□□ -0.55
NHLRC3-202ENST00000379600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 LMBRD1Q9NUN5 540 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 IL13P35225 146 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 ZNF445P59923 1031 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 TTC22Q5TAA0 569 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 DCTPP1Q9H773 170 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 TWISTNBQ3B726 338 aaPredicted RBP11.6□□□□□ -0.55
NHLRC3-202ENST00000379600 FAM83GA6ND36 823 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 HDGFL2Q7Z4V5 671 aaPredicted RBP11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 ZDHHC9Q9Y397 364 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 RAPGEF3O95398 923 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 MCTP1Q6DN14 999 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 CHAMP1Q96JM3 812 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 GNAI1P63096 354 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 RABEP1Q15276 862 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 ZSCAN23Q3MJ62 389 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
NHLRC3-202ENST00000379600 ZGPATQ8N5A5 531 aaKnown RBP11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 GPT2Q8TD30 523 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 ZRANB1Q9UGI0 708 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 RIMBP3CA6NJZ7 1639 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 RIMBP3BA6NNM3 1639 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 RIMBP3Q9UFD9 1639 aa11.58□□□□□ -0.56
NHLRC3-202ENST00000379600 ATP7BP35670 1465 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 CAVIN1Q6NZI2 390 aaKnown RBP11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 KIF24Q5T7B8 1368 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 TUBGCP6Q96RT7 1819 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 RICTORQ6R327 1708 aa11.57□□□□□ -0.56
NHLRC3-202ENST00000379600 OFD1O75665 1012 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 TPM2P07951 284 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 GOLGA6L22H0YM25 854 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 SDSP20132 328 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 PDLIM2Q96JY6 352 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 ZMYND15Q9H091 742 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 SMARCA5O60264 1052 aaPredicted RBP11.56□□□□□ -0.56
NHLRC3-202ENST00000379600 KRT24Q2M2I5 525 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms