RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 NUP188Q5SRE5 1749 aa8.94□□□□□ -0.98
NFX1-202ENST00000379521 BCAR3O75815 825 aa8.93□□□□□ -0.98
NFX1-202ENST00000379521 IGHDP01880 384 aa8.93□□□□□ -0.98
NFX1-202ENST00000379521 RLBP1P12271 317 aa8.93□□□□□ -0.98
NFX1-202ENST00000379521 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
NFX1-202ENST00000379521 NUDT16Q96DE0 195 aaKnown RBP8.93□□□□□ -0.98
NFX1-202ENST00000379521 SBNO1A3KN83 1393 aa8.93□□□□□ -0.98
NFX1-202ENST00000379521 ATP10DQ9P241 1426 aa8.92□□□□□ -0.98
NFX1-202ENST00000379521 HEG1Q9ULI3 1381 aa8.92□□□□□ -0.98
NFX1-202ENST00000379521 TTC21BQ7Z4L5 1316 aa8.92□□□□□ -0.98
NFX1-202ENST00000379521 IGSF1Q8N6C5 1336 aa8.92□□□□□ -0.98
NFX1-202ENST00000379521 HDGFP51858 240 aaKnown RBP8.92□□□□□ -0.98
NFX1-202ENST00000379521 PLIN1O60240 522 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 CCDC136Q96JN2 1154 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 COL22A1Q8NFW1 1626 aaPredicted RBP8.91□□□□□ -0.98
NFX1-202ENST00000379521 CEMIPQ8WUJ3 1361 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 PDE4AP27815 886 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 CCDC146Q8IYE0 955 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 IFT57Q9NWB7 429 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 KIF16BQ96L93 1317 aa8.91□□□□□ -0.98
NFX1-202ENST00000379521 IPO9Q96P70 1041 aaKnown RBP8.91□□□□□ -0.98
NFX1-202ENST00000379521 IL17RAQ96F46 866 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 SOS1Q07889 1333 aaPredicted RBP8.9□□□□□ -0.98
NFX1-202ENST00000379521 RREB1Q92766 1687 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 NFE2L2Q16236 605 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 HDGFL2Q7Z4V5 671 aaPredicted RBP8.9□□□□□ -0.98
NFX1-202ENST00000379521 SMC5Q8IY18 1101 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 CFAP53Q96M91 514 aa8.9□□□□□ -0.98
NFX1-202ENST00000379521 MSH6P52701 1360 aa8.9□□□□□ -0.99
NFX1-202ENST00000379521 CLUAP1Q96AJ1 413 aa8.9□□□□□ -0.99
NFX1-202ENST00000379521 PNNQ9H307 717 aaKnown RBP8.9□□□□□ -0.99
NFX1-202ENST00000379521 DDX60Q8IY21 1712 aaKnown RBP8.89□□□□□ -0.99
NFX1-202ENST00000379521 MYH16Q9H6N6 1097 aa8.89□□□□□ -0.99
NFX1-202ENST00000379521 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
NFX1-202ENST00000379521 MVPQ14764 893 aaKnown RBP8.89□□□□□ -0.99
NFX1-202ENST00000379521 PCDHB15Q9Y5E8 787 aa8.89□□□□□ -0.99
NFX1-202ENST00000379521 PXDNQ92626 1479 aa8.89□□□□□ -0.99
NFX1-202ENST00000379521 DIAPH1O60610 1272 aaKnown RBP8.88□□□□□ -0.99
NFX1-202ENST00000379521 VAMP4O75379 141 aa8.88□□□□□ -0.99
NFX1-202ENST00000379521 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
NFX1-202ENST00000379521 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.88□□□□□ -0.99
NFX1-202ENST00000379521 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
NFX1-202ENST00000379521 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
NFX1-202ENST00000379521 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.88□□□□□ -0.99
NFX1-202ENST00000379521 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
NFX1-202ENST00000379521 POLR3GLQ9BT43 218 aa8.88□□□□□ -0.99
NFX1-202ENST00000379521 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
NFX1-202ENST00000379521 GGNBP2Q9H3C7 697 aa8.87□□□□□ -0.99
NFX1-202ENST00000379521 CHL1O00533 1208 aa8.87□□□□□ -0.99
NFX1-202ENST00000379521 TJP1Q07157 1748 aa8.87□□□□□ -0.99
NFX1-202ENST00000379521 HTATSF1O43719 755 aaKnown RBP8.87□□□□□ -0.99
NFX1-202ENST00000379521 DDIT3P35638 169 aa8.87□□□□□ -0.99
NFX1-202ENST00000379521 FLT4P35916 1363 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
NFX1-202ENST00000379521 TMEM94Q12767 1356 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 ACEP12821 1306 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 CFAP44Q96MT7 982 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 MAPK8IP3Q9UPT6 1336 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 TRIM27P14373 513 aa8.86□□□□□ -0.99
NFX1-202ENST00000379521 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
NFX1-202ENST00000379521 NME9Q86XW9 330 aa8.85□□□□□ -0.99
NFX1-202ENST00000379521 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
NFX1-202ENST00000379521 TOGARAM1Q9Y4F4 1720 aa8.85□□□□□ -0.99
NFX1-202ENST00000379521 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
NFX1-202ENST00000379521 FAM161AQ3B820 660 aa8.85□□□□□ -0.99
NFX1-202ENST00000379521 SSH1Q8WYL5 1049 aa8.85□□□□□ -0.99
NFX1-202ENST00000379521 LRP6O75581 1613 aa8.84□□□□□ -0.99
NFX1-202ENST00000379521 SRPK2P78362 688 aaKnown RBP8.84□□□□□ -0.99
NFX1-202ENST00000379521 ARFGEF2Q9Y6D5 1785 aa8.84□□□□□ -0.99
NFX1-202ENST00000379521 INTS3Q68E01 1043 aaKnown RBP8.84□□□□□ -1
NFX1-202ENST00000379521 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -1
NFX1-202ENST00000379521 TNNQ9UQP3 1299 aa8.84□□□□□ -1
NFX1-202ENST00000379521 TXNDC2Q86VQ3 553 aa8.83□□□□□ -1
NFX1-202ENST00000379521 PAK3O75914 559 aaPredicted RBP8.83□□□□□ -1
NFX1-202ENST00000379521 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
NFX1-202ENST00000379521 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
NFX1-202ENST00000379521 NCKAP5LQ9HCH0 1330 aa8.83□□□□□ -1
NFX1-202ENST00000379521 THEMISQ8N1K5 641 aaPredicted RBP8.82□□□□□ -1
NFX1-202ENST00000379521 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
NFX1-202ENST00000379521 ANTXR1Q9H6X2 564 aa8.82□□□□□ -1
NFX1-202ENST00000379521 ZRANB1Q9UGI0 708 aa8.82□□□□□ -1
NFX1-202ENST00000379521 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
NFX1-202ENST00000379521 POGKQ9P215 609 aa8.82□□□□□ -1
NFX1-202ENST00000379521 SIRT2Q8IXJ6 389 aa8.82□□□□□ -1
NFX1-202ENST00000379521 NUCB1Q02818 461 aa8.81□□□□□ -1
NFX1-202ENST00000379521 ZKSCAN2Q63HK3 967 aa8.81□□□□□ -1
NFX1-202ENST00000379521 MBIPQ9NS73 344 aa8.81□□□□□ -1
NFX1-202ENST00000379521 STK26Q9P289 416 aa8.81□□□□□ -1
NFX1-202ENST00000379521 AMOTL2Q9Y2J4 779 aa8.81□□□□□ -1
NFX1-202ENST00000379521 AK9Q5TCS8 1911 aa8.81□□□□□ -1
NFX1-202ENST00000379521 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
NFX1-202ENST00000379521 MYT1LQ9UL68 1186 aa8.81□□□□□ -1
NFX1-202ENST00000379521 C1orf167Q5SNV9 1468 aa8.8□□□□□ -1
NFX1-202ENST00000379521 CALD1Q05682 793 aaKnown RBP8.8□□□□□ -1
NFX1-202ENST00000379521 PANK1Q8TE04 598 aa8.8□□□□□ -1
NFX1-202ENST00000379521 NRAPQ86VF7 1730 aa8.8□□□□□ -1
NFX1-202ENST00000379521 MAP3K19Q56UN5 1328 aa8.8□□□□□ -1
NFX1-202ENST00000379521 RIPK4P57078 832 aa8.8□□□□□ -1
NFX1-202ENST00000379521 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 310 ms