RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SLC24A1O60721 1099 aa26.72■■□□□ 1.87
TMEM88B-201ENST00000378821 WDR17Q8IZU2 1322 aa26.71■■□□□ 1.87
TMEM88B-201ENST00000378821 ST20-MTHFSA0A0A6YYL1 179 aa26.71■■□□□ 1.87
TMEM88B-201ENST00000378821 EDC4Q6P2E9 1401 aaKnown RBP26.71■■□□□ 1.87
TMEM88B-201ENST00000378821 PDE3BQ13370 1112 aa26.7■■□□□ 1.86
TMEM88B-201ENST00000378821 HDGFL2Q7Z4V5 671 aaPredicted RBP26.69■■□□□ 1.86
TMEM88B-201ENST00000378821 NINLQ9Y2I6 1382 aa26.69■■□□□ 1.86
TMEM88B-201ENST00000378821 EN1Q05925 392 aaPredicted RBP26.68■■□□□ 1.86
TMEM88B-201ENST00000378821 TMC1Q8TDI8 760 aa26.68■■□□□ 1.86
TMEM88B-201ENST00000378821 TERF2IPQ9NYB0 399 aa26.68■■□□□ 1.86
TMEM88B-201ENST00000378821 WNK3Q9BYP7 1800 aa26.67■■□□□ 1.86
TMEM88B-201ENST00000378821 ZBTB7CA1YPR0 619 aa26.67■■□□□ 1.86
TMEM88B-201ENST00000378821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.67■■□□□ 1.86
TMEM88B-201ENST00000378821 A0A1W2PP64 1363 aa26.67■■□□□ 1.86
TMEM88B-201ENST00000378821 PEAK1Q9H792 1746 aa26.67■■□□□ 1.86
TMEM88B-201ENST00000378821 TRIM37O94972 964 aa26.66■■□□□ 1.86
TMEM88B-201ENST00000378821 NME9Q86XW9 330 aa26.66■■□□□ 1.86
TMEM88B-201ENST00000378821 LRRC37A3O60309 1634 aa26.65■■□□□ 1.86
TMEM88B-201ENST00000378821 C11orf95C9JLR9 678 aaPredicted RBP26.65■■□□□ 1.86
TMEM88B-201ENST00000378821 TOM1L2Q6ZVM7 507 aa26.65■■□□□ 1.86
TMEM88B-201ENST00000378821 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
TMEM88B-201ENST00000378821 TIMELESSQ9UNS1 1208 aa26.65■■□□□ 1.86
TMEM88B-201ENST00000378821 CARD10Q9BWT7 1032 aa26.64■■□□□ 1.86
TMEM88B-201ENST00000378821 PARD3Q8TEW0 1356 aa26.63■■□□□ 1.85
TMEM88B-201ENST00000378821 CDCA7Q9BWT1 371 aaPredicted RBP26.63■■□□□ 1.85
TMEM88B-201ENST00000378821 SOX12O15370 315 aa26.61■■□□□ 1.85
TMEM88B-201ENST00000378821 OVOS2A0A0J9YW53 1432 aa26.61■■□□□ 1.85
TMEM88B-201ENST00000378821 OVOS2Q6IE36 1432 aa26.61■■□□□ 1.85
TMEM88B-201ENST00000378821 LTN1O94822 1766 aa26.61■■□□□ 1.85
TMEM88B-201ENST00000378821 EZH2Q15910 746 aaKnown RBP26.6■■□□□ 1.85
TMEM88B-201ENST00000378821 USP47Q96K76 1375 aa26.59■■□□□ 1.85
TMEM88B-201ENST00000378821 OVOS2A0A0G2JMS6 1433 aa26.59■■□□□ 1.85
TMEM88B-201ENST00000378821 BCL9O00512 1426 aa26.59■■□□□ 1.85
TMEM88B-201ENST00000378821 SBF2Q86WG5 1849 aa26.59■■□□□ 1.85
TMEM88B-201ENST00000378821 RREB1Q92766 1687 aa26.58■■□□□ 1.85
TMEM88B-201ENST00000378821 APBA3O96018 575 aa26.58■■□□□ 1.85
TMEM88B-201ENST00000378821 DDB1Q16531 1140 aa26.58■■□□□ 1.85
TMEM88B-201ENST00000378821 CCDC7Q96M83 1385 aa26.58■■□□□ 1.84
TMEM88B-201ENST00000378821 LRP5O75197 1615 aa26.57■■□□□ 1.84
TMEM88B-201ENST00000378821 ERBB3P21860 1342 aa26.55■■□□□ 1.84
TMEM88B-201ENST00000378821 ANKRD36BQ8N2N9 1353 aa26.55■■□□□ 1.84
TMEM88B-201ENST00000378821 CSB-PGBD3P0DP91 1061 aa26.54■■□□□ 1.84
TMEM88B-201ENST00000378821 TMF1P82094 1093 aa26.54■■□□□ 1.84
TMEM88B-201ENST00000378821 MARCH10Q8NA82 808 aaPredicted RBP26.53■■□□□ 1.84
TMEM88B-201ENST00000378821 RGPD3A6NKT7 1758 aaPredicted RBP26.53■■□□□ 1.84
TMEM88B-201ENST00000378821 RGPD4Q7Z3J3 1758 aa26.53■■□□□ 1.84
TMEM88B-201ENST00000378821 PSDA5PKW4 1024 aaPredicted RBP26.52■■□□□ 1.84
TMEM88B-201ENST00000378821 NUP188Q5SRE5 1749 aa26.52■■□□□ 1.84
TMEM88B-201ENST00000378821 PLSCR1O15162 318 aa26.48■■□□□ 1.83
TMEM88B-201ENST00000378821 IP6K1Q92551 441 aa26.48■■□□□ 1.83
TMEM88B-201ENST00000378821 BCL11BQ9C0K0 894 aaPredicted RBP26.48■■□□□ 1.83
TMEM88B-201ENST00000378821 EXOC5O00471 708 aa26.47■■□□□ 1.83
TMEM88B-201ENST00000378821 R3HDM1Q15032 1099 aaKnown RBP26.47■■□□□ 1.83
TMEM88B-201ENST00000378821 CDCA8Q53HL2 280 aa26.47■■□□□ 1.83
TMEM88B-201ENST00000378821 TNS2Q63HR2 1409 aa26.47■■□□□ 1.83
TMEM88B-201ENST00000378821 ANKRD24Q8TF21 1146 aa26.46■■□□□ 1.83
TMEM88B-201ENST00000378821 COG3Q96JB2 828 aa26.46■■□□□ 1.83
TMEM88B-201ENST00000378821 FAM208AQ9UK61 1670 aaKnown RBP26.45■■□□□ 1.82
TMEM88B-201ENST00000378821 NLRP2Q9NX02 1062 aa26.44■■□□□ 1.82
TMEM88B-201ENST00000378821 FYB1O15117 783 aa26.43■■□□□ 1.82
TMEM88B-201ENST00000378821 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
TMEM88B-201ENST00000378821 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
TMEM88B-201ENST00000378821 MYOM1P52179 1685 aa26.41■■□□□ 1.82
TMEM88B-201ENST00000378821 IL2RBP14784 551 aa26.41■■□□□ 1.82
TMEM88B-201ENST00000378821 HOXC9P31274 260 aa26.39■■□□□ 1.82
TMEM88B-201ENST00000378821 NBPF14Q5TI25 921 aa26.39■■□□□ 1.82
TMEM88B-201ENST00000378821 FBLN1P23142 703 aa26.37■■□□□ 1.81
TMEM88B-201ENST00000378821 RTL1A6NKG5 1358 aa26.36■■□□□ 1.81
TMEM88B-201ENST00000378821 NHSQ6T4R5 1651 aa26.36■■□□□ 1.81
TMEM88B-201ENST00000378821 PROM2Q8N271 834 aa26.36■■□□□ 1.81
TMEM88B-201ENST00000378821 KIF20BQ96Q89 1820 aa26.36■■□□□ 1.81
TMEM88B-201ENST00000378821 CARD14Q9BXL6 1004 aa26.35■■□□□ 1.81
TMEM88B-201ENST00000378821 GGNBP2Q9H3C7 697 aa26.34■■□□□ 1.81
TMEM88B-201ENST00000378821 AMPHP49418 695 aa26.32■■□□□ 1.8
TMEM88B-201ENST00000378821 RGPD2P0DJD1 1756 aa26.32■■□□□ 1.8
TMEM88B-201ENST00000378821 KCNQ2O43526 872 aa26.31■■□□□ 1.8
TMEM88B-201ENST00000378821 KIF24Q5T7B8 1368 aa26.3■■□□□ 1.8
TMEM88B-201ENST00000378821 RRS1Q15050 365 aaKnown RBP26.29■■□□□ 1.8
TMEM88B-201ENST00000378821 LTV1Q96GA3 475 aaPredicted RBP26.29■■□□□ 1.8
TMEM88B-201ENST00000378821 TXNRD1Q16881 649 aa26.27■■□□□ 1.8
TMEM88B-201ENST00000378821 NSD3Q9BZ95 1437 aa26.26■■□□□ 1.79
TMEM88B-201ENST00000378821 ANO8Q9HCE9 1232 aaPredicted RBP26.26■■□□□ 1.79
TMEM88B-201ENST00000378821 BTAF1O14981 1849 aa26.25■■□□□ 1.79
TMEM88B-201ENST00000378821 SHANK3Q9BYB0 1731 aa26.25■■□□□ 1.79
TMEM88B-201ENST00000378821 INSRP06213 1382 aa26.25■■□□□ 1.79
TMEM88B-201ENST00000378821 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
TMEM88B-201ENST00000378821 NBPF6Q5VWK0 638 aa26.24■■□□□ 1.79
TMEM88B-201ENST00000378821 NBPF4Q96M43 638 aa26.24■■□□□ 1.79
TMEM88B-201ENST00000378821 FLT4P35916 1363 aa26.23■■□□□ 1.79
TMEM88B-201ENST00000378821 ACSBG1Q96GR2 724 aa26.23■■□□□ 1.79
TMEM88B-201ENST00000378821 ANKRD26Q9UPS8 1709 aa26.22■■□□□ 1.79
TMEM88B-201ENST00000378821 EIF4G2P78344 907 aaKnown RBP eCLIP26.22■■□□□ 1.79
TMEM88B-201ENST00000378821 MEGF6O75095 1541 aa26.22■■□□□ 1.79
TMEM88B-201ENST00000378821 CGNL1Q0VF96 1302 aa26.21■■□□□ 1.79
TMEM88B-201ENST00000378821 HSP90AB2PQ58FF8 381 aa26.21■■□□□ 1.79
TMEM88B-201ENST00000378821 PAPPAQ13219 1627 aa26.19■■□□□ 1.78
TMEM88B-201ENST00000378821 ZCRB1Q8TBF4 217 aaKnown RBP26.19■■□□□ 1.78
TMEM88B-201ENST00000378821 DDX54Q8TDD1 881 aaKnown RBP26.19■■□□□ 1.78
TMEM88B-201ENST00000378821 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
TMEM88B-201ENST00000378821 HSPA5P11021 654 aaKnown RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms