RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 FOXO3O43524 673 aa22.7■■□□□ 1.22
THUMPD2-201ENST00000378727 FLT4P35916 1363 aa22.69■■□□□ 1.22
THUMPD2-201ENST00000378727 RIPK4P57078 832 aa22.69■■□□□ 1.22
THUMPD2-201ENST00000378727 TRPM3Q9HCF6 1732 aaPredicted RBP22.68■■□□□ 1.22
THUMPD2-201ENST00000378727 ATF3P18847 181 aa22.67■■□□□ 1.22
THUMPD2-201ENST00000378727 PLIN1O60240 522 aa22.66■■□□□ 1.22
THUMPD2-201ENST00000378727 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
THUMPD2-201ENST00000378727 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
THUMPD2-201ENST00000378727 NFAT5O94916 1531 aa22.65■■□□□ 1.22
THUMPD2-201ENST00000378727 NEFMP07197 916 aa22.64■■□□□ 1.22
THUMPD2-201ENST00000378727 AMPHP49418 695 aa22.64■■□□□ 1.22
THUMPD2-201ENST00000378727 NFE2L2Q16236 605 aa22.64■■□□□ 1.22
THUMPD2-201ENST00000378727 KIF24Q5T7B8 1368 aa22.64■■□□□ 1.21
THUMPD2-201ENST00000378727 LTN1O94822 1766 aa22.63■■□□□ 1.21
THUMPD2-201ENST00000378727 SULT6B1Q6IMI4 303 aa22.63■■□□□ 1.21
THUMPD2-201ENST00000378727 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
THUMPD2-201ENST00000378727 HOXC9P31274 260 aa22.62■■□□□ 1.21
THUMPD2-201ENST00000378727 MYH16Q9H6N6 1097 aa22.62■■□□□ 1.21
THUMPD2-201ENST00000378727 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
THUMPD2-201ENST00000378727 KRT28Q7Z3Y7 464 aa22.61■■□□□ 1.21
THUMPD2-201ENST00000378727 CADPS2Q86UW7 1296 aa22.61■■□□□ 1.21
THUMPD2-201ENST00000378727 IL16Q14005 1332 aa22.61■■□□□ 1.21
THUMPD2-201ENST00000378727 MSH6P52701 1360 aa22.61■■□□□ 1.21
THUMPD2-201ENST00000378727 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
THUMPD2-201ENST00000378727 B4GALNT3Q6L9W6 998 aa22.6■■□□□ 1.21
THUMPD2-201ENST00000378727 EXOC6Q8TAG9 804 aa22.59■■□□□ 1.21
THUMPD2-201ENST00000378727 FANCIQ9NVI1 1328 aa22.59■■□□□ 1.21
THUMPD2-201ENST00000378727 SLIT3O75094 1523 aa22.58■■□□□ 1.21
THUMPD2-201ENST00000378727 RTL1A6NKG5 1358 aa22.58■■□□□ 1.21
THUMPD2-201ENST00000378727 ALS2Q96Q42 1657 aa22.58■■□□□ 1.2
THUMPD2-201ENST00000378727 BCAR3O75815 825 aa22.58■■□□□ 1.2
THUMPD2-201ENST00000378727 TSR2Q969E8 191 aaKnown RBP22.58■■□□□ 1.2
THUMPD2-201ENST00000378727 C20orf194Q5TEA3 1177 aa22.57■■□□□ 1.2
THUMPD2-201ENST00000378727 IGSF1Q8N6C5 1336 aa22.57■■□□□ 1.2
THUMPD2-201ENST00000378727 KDRP35968 1356 aa22.56■■□□□ 1.2
THUMPD2-201ENST00000378727 KCNH5Q8NCM2 988 aa22.56■■□□□ 1.2
THUMPD2-201ENST00000378727 EYA1Q99502 592 aa22.56■■□□□ 1.2
THUMPD2-201ENST00000378727 PHRF1Q9P1Y6 1649 aaKnown RBP22.56■■□□□ 1.2
THUMPD2-201ENST00000378727 DDX17Q92841 729 aaKnown RBP22.56■■□□□ 1.2
THUMPD2-201ENST00000378727 USP19O94966 1318 aa22.55■■□□□ 1.2
THUMPD2-201ENST00000378727 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
THUMPD2-201ENST00000378727 THUMPD2Q9BTF0 503 aaKnown RBP22.54■■□□□ 1.2
THUMPD2-201ENST00000378727 LMOD2Q6P5Q4 547 aa22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 IP6K1Q92551 441 aa22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 GCP02774 474 aa22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 RARSP54136 660 aaKnown RBP22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 CRBNQ96SW2 442 aa22.53■■□□□ 1.2
THUMPD2-201ENST00000378727 EXOSC9Q06265 439 aaKnown RBP22.51■■□□□ 1.19
THUMPD2-201ENST00000378727 FAM83GA6ND36 823 aa22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 LMOD3Q0VAK6 560 aa22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 MED1Q15648 1581 aaPredicted RBP22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 NPHP3Q7Z494 1330 aa22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 ARHGEF25Q86VW2 580 aa22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 CCDC136Q96JN2 1154 aa22.5■■□□□ 1.19
THUMPD2-201ENST00000378727 PXDNQ92626 1479 aa22.49■■□□□ 1.19
THUMPD2-201ENST00000378727 PLEKHG5O94827 1062 aa22.49■■□□□ 1.19
THUMPD2-201ENST00000378727 CT47B1P0C2W7 299 aaPredicted RBP22.48■■□□□ 1.19
THUMPD2-201ENST00000378727 CALD1Q05682 793 aaKnown RBP22.48■■□□□ 1.19
THUMPD2-201ENST00000378727 ZNF853P0CG23 659 aa22.47■■□□□ 1.19
THUMPD2-201ENST00000378727 DCTN1Q14203 1278 aa22.47■■□□□ 1.19
THUMPD2-201ENST00000378727 BRINP3Q76B58 766 aa22.47■■□□□ 1.19
THUMPD2-201ENST00000378727 ZBTB7CA1YPR0 619 aa22.46■■□□□ 1.19
THUMPD2-201ENST00000378727 IFT57Q9NWB7 429 aa22.46■■□□□ 1.19
THUMPD2-201ENST00000378727 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
THUMPD2-201ENST00000378727 MTHFSDQ2M296 383 aaKnown RBP22.45■■□□□ 1.18
THUMPD2-201ENST00000378727 RGPD2P0DJD1 1756 aa22.45■■□□□ 1.18
THUMPD2-201ENST00000378727 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
THUMPD2-201ENST00000378727 GNAI1P63096 354 aa22.44■■□□□ 1.18
THUMPD2-201ENST00000378727 BCL2L13Q9BXK5 485 aa22.44■■□□□ 1.18
THUMPD2-201ENST00000378727 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
THUMPD2-201ENST00000378727 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
THUMPD2-201ENST00000378727 NBPF6Q5VWK0 638 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 USHBP1Q8N6Y0 703 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 NBPF4Q96M43 638 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 CRYBG1Q9Y4K1 1723 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 SPATA31A3Q5VYP0 1347 aa22.42■■□□□ 1.18
THUMPD2-201ENST00000378727 PDE3AQ14432 1141 aa22.41■■□□□ 1.18
THUMPD2-201ENST00000378727 MCM10Q7L590 875 aa22.41■■□□□ 1.18
THUMPD2-201ENST00000378727 RGPD5Q99666 1765 aa22.4■■□□□ 1.18
THUMPD2-201ENST00000378727 FRAT1Q92837 279 aaPredicted RBP22.4■■□□□ 1.18
THUMPD2-201ENST00000378727 AXIN2Q9Y2T1 843 aa22.4■■□□□ 1.18
THUMPD2-201ENST00000378727 GAS2L2Q8NHY3 880 aa22.39■■□□□ 1.17
THUMPD2-201ENST00000378727 CANXP27824 592 aaKnown RBP22.38■■□□□ 1.17
THUMPD2-201ENST00000378727 ZC3H6P61129 1189 aaKnown RBP22.38■■□□□ 1.17
THUMPD2-201ENST00000378727 SSH1Q8WYL5 1049 aa22.38■■□□□ 1.17
THUMPD2-201ENST00000378727 LRRC59Q96AG4 307 aaKnown RBP22.38■■□□□ 1.17
THUMPD2-201ENST00000378727 CRB1P82279 1406 aa22.38■■□□□ 1.17
THUMPD2-201ENST00000378727 CABLES1Q8TDN4 633 aa22.37■■□□□ 1.17
THUMPD2-201ENST00000378727 PANK1Q8TE04 598 aa22.37■■□□□ 1.17
THUMPD2-201ENST00000378727 TNNQ9UQP3 1299 aa22.37■■□□□ 1.17
THUMPD2-201ENST00000378727 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
THUMPD2-201ENST00000378727 CAMTA1Q9Y6Y1 1673 aa22.36■■□□□ 1.17
THUMPD2-201ENST00000378727 TSPYL6Q8N831 410 aa22.36■■□□□ 1.17
THUMPD2-201ENST00000378727 ANKRD24Q8TF21 1146 aa22.36■■□□□ 1.17
THUMPD2-201ENST00000378727 SMC4Q9NTJ3 1288 aa22.36■■□□□ 1.17
THUMPD2-201ENST00000378727 COL18A1P39060 1754 aa22.36■■□□□ 1.17
THUMPD2-201ENST00000378727 SOS2Q07890 1332 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms