RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 A0A0G2JS52 829 aa30.24■■■□□ 2.43
GFRA3-202ENST00000378362 MYT1Q01538 1121 aa30.24■■■□□ 2.43
GFRA3-202ENST00000378362 AATKQ6ZMQ8 1374 aa30.23■■■□□ 2.43
GFRA3-202ENST00000378362 SPATA31A5Q5VU36 1347 aa30.23■■■□□ 2.43
GFRA3-202ENST00000378362 SPATA31A7Q8IWB4 1347 aa30.23■■■□□ 2.43
GFRA3-202ENST00000378362 COL18A1P39060 1754 aa30.23■■■□□ 2.43
GFRA3-202ENST00000378362 USP54Q70EL1 1684 aa30.22■■■□□ 2.43
GFRA3-202ENST00000378362 RRS1Q15050 365 aaKnown RBP30.22■■■□□ 2.43
GFRA3-202ENST00000378362 KIF20BQ96Q89 1820 aa30.2■■■□□ 2.43
GFRA3-202ENST00000378362 COL5A2P05997 1499 aaPredicted RBP30.2■■■□□ 2.43
GFRA3-202ENST00000378362 LTN1O94822 1766 aa30.2■■■□□ 2.43
GFRA3-202ENST00000378362 CCDC7Q96M83 1385 aa30.19■■■□□ 2.42
GFRA3-202ENST00000378362 SEPT12Q8IYM1 358 aa30.19■■■□□ 2.42
GFRA3-202ENST00000378362 SPATA31A1Q5TZJ5 1347 aa30.19■■■□□ 2.42
GFRA3-202ENST00000378362 CDK12Q9NYV4 1490 aaPredicted RBP30.19■■■□□ 2.42
GFRA3-202ENST00000378362 TNNT2P45379 298 aaPredicted RBP30.17■■■□□ 2.42
GFRA3-202ENST00000378362 CGNL1Q0VF96 1302 aa30.17■■■□□ 2.42
GFRA3-202ENST00000378362 MAP3K19Q56UN5 1328 aa30.16■■■□□ 2.42
GFRA3-202ENST00000378362 CNGB1Q14028 1251 aaPredicted RBP30.16■■■□□ 2.42
GFRA3-202ENST00000378362 CSB-PGBD3P0DP91 1061 aa30.15■■■□□ 2.42
GFRA3-202ENST00000378362 TOM1L2Q6ZVM7 507 aa30.15■■■□□ 2.42
GFRA3-202ENST00000378362 LTV1Q96GA3 475 aaPredicted RBP30.15■■■□□ 2.42
GFRA3-202ENST00000378362 BRWD3Q6RI45 1802 aa30.13■■■□□ 2.41
GFRA3-202ENST00000378362 ONECUT3O60422 494 aaPredicted RBP30.12■■■□□ 2.41
GFRA3-202ENST00000378362 FAM182BQ5T319 152 aa30.12■■■□□ 2.41
GFRA3-202ENST00000378362 AMPHP49418 695 aa30.11■■■□□ 2.41
GFRA3-202ENST00000378362 KNSTRNQ9Y448 316 aa30.1■■■□□ 2.41
GFRA3-202ENST00000378362 WDR17Q8IZU2 1322 aa30.1■■■□□ 2.41
GFRA3-202ENST00000378362 TCP11L2Q8N4U5 519 aa30.09■■■□□ 2.41
GFRA3-202ENST00000378362 EMILIN1Q9Y6C2 1016 aa30.09■■■□□ 2.41
GFRA3-202ENST00000378362 PPM1GO15355 546 aaPredicted RBP30.08■■■□□ 2.41
GFRA3-202ENST00000378362 ANKRD24Q8TF21 1146 aa30.08■■■□□ 2.41
GFRA3-202ENST00000378362 IP6K1Q92551 441 aa30.08■■■□□ 2.41
GFRA3-202ENST00000378362 CRB1P82279 1406 aa30.08■■■□□ 2.41
GFRA3-202ENST00000378362 HOXC9P31274 260 aa30.08■■■□□ 2.41
GFRA3-202ENST00000378362 ERBB3P21860 1342 aa30.06■■■□□ 2.4
GFRA3-202ENST00000378362 NLRP2Q9NX02 1062 aa30.06■■■□□ 2.4
GFRA3-202ENST00000378362 PER1O15534 1290 aaPredicted RBP30.03■■■□□ 2.4
GFRA3-202ENST00000378362 HSP90AB2PQ58FF8 381 aa30.03■■■□□ 2.4
GFRA3-202ENST00000378362 KRT27Q7Z3Y8 459 aa30.03■■■□□ 2.4
GFRA3-202ENST00000378362 UPF1Q92900 1129 aaKnown RBP eCLIP30.03■■■□□ 2.4
GFRA3-202ENST00000378362 AMER1Q5JTC6 1135 aaPredicted RBP30.02■■■□□ 2.4
GFRA3-202ENST00000378362 CC2D1BQ5T0F9 858 aaKnown RBP30.02■■■□□ 2.4
GFRA3-202ENST00000378362 MAP2P11137 1827 aaKnown RBP30.01■■■□□ 2.4
GFRA3-202ENST00000378362 PEAK1Q9H792 1746 aa30.01■■■□□ 2.39
GFRA3-202ENST00000378362 BARGINQ6ZT62 677 aa30.01■■■□□ 2.39
GFRA3-202ENST00000378362 MORC1Q86VD1 984 aa30■■■□□ 2.39
GFRA3-202ENST00000378362 CARD10Q9BWT7 1032 aa30■■■□□ 2.39
GFRA3-202ENST00000378362 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
GFRA3-202ENST00000378362 THSD7AQ9UPZ6 1657 aa29.98■■■□□ 2.39
GFRA3-202ENST00000378362 POLKQ9UBT6 870 aa29.98■■■□□ 2.39
GFRA3-202ENST00000378362 RGPD2P0DJD1 1756 aa29.96■■■□□ 2.39
GFRA3-202ENST00000378362 THRAP3Q9Y2W1 955 aaKnown RBP29.96■■■□□ 2.39
GFRA3-202ENST00000378362 BLMP54132 1417 aaPredicted RBP29.96■■■□□ 2.39
GFRA3-202ENST00000378362 ANKRD26Q9UPS8 1709 aa29.96■■■□□ 2.39
GFRA3-202ENST00000378362 ABCC6O95255 1503 aa29.96■■■□□ 2.39
GFRA3-202ENST00000378362 USHBP1Q8N6Y0 703 aa29.95■■■□□ 2.39
GFRA3-202ENST00000378362 PDE3BQ13370 1112 aa29.92■■■□□ 2.38
GFRA3-202ENST00000378362 FLT4P35916 1363 aa29.92■■■□□ 2.38
GFRA3-202ENST00000378362 NBPF6Q5VWK0 638 aa29.92■■■□□ 2.38
GFRA3-202ENST00000378362 NBPF4Q96M43 638 aa29.92■■■□□ 2.38
GFRA3-202ENST00000378362 RTL1A6NKG5 1358 aa29.91■■■□□ 2.38
GFRA3-202ENST00000378362 NSD2O96028 1365 aa29.9■■■□□ 2.38
GFRA3-202ENST00000378362 DDB1Q16531 1140 aa29.89■■■□□ 2.38
GFRA3-202ENST00000378362 INSRP06213 1382 aa29.88■■■□□ 2.37
GFRA3-202ENST00000378362 DISP2A7MBM2 1401 aa29.85■■■□□ 2.37
GFRA3-202ENST00000378362 WNK3Q9BYP7 1800 aa29.85■■■□□ 2.37
GFRA3-202ENST00000378362 PARP4Q9UKK3 1724 aaKnown RBP29.84■■■□□ 2.37
GFRA3-202ENST00000378362 IL2RBP14784 551 aa29.84■■■□□ 2.37
GFRA3-202ENST00000378362 DDX10Q13206 875 aaKnown RBP29.84■■■□□ 2.37
GFRA3-202ENST00000378362 LRRC37A3O60309 1634 aa29.83■■■□□ 2.37
GFRA3-202ENST00000378362 EXOC5O00471 708 aa29.82■■■□□ 2.36
GFRA3-202ENST00000378362 MARCH10Q8NA82 808 aaPredicted RBP29.82■■■□□ 2.36
GFRA3-202ENST00000378362 SMG6Q86US8 1419 aaKnown RBP29.81■■■□□ 2.36
GFRA3-202ENST00000378362 KIF24Q5T7B8 1368 aa29.81■■■□□ 2.36
GFRA3-202ENST00000378362 EIF4A2Q14240 407 aaKnown RBP29.8■■■□□ 2.36
GFRA3-202ENST00000378362 TRIM37O94972 964 aa29.8■■■□□ 2.36
GFRA3-202ENST00000378362 KAT6BQ8WYB5 2073 aa29.8■■■□□ 2.36
GFRA3-202ENST00000378362 MTHFSP49914 203 aa29.79■■■□□ 2.36
GFRA3-202ENST00000378362 CDCA7Q9BWT1 371 aaPredicted RBP29.79■■■□□ 2.36
GFRA3-202ENST00000378362 DEFB132Q7Z7B7 95 aa29.78■■■□□ 2.36
GFRA3-202ENST00000378362 EYA1Q99502 592 aa29.78■■■□□ 2.36
GFRA3-202ENST00000378362 FAM208AQ9UK61 1670 aaKnown RBP29.78■■■□□ 2.36
GFRA3-202ENST00000378362 FAM196AQ6ZSG2 479 aa29.77■■■□□ 2.36
GFRA3-202ENST00000378362 SRCAPQ6ZRS2 3230 aa29.76■■■□□ 2.35
GFRA3-202ENST00000378362 DDX54Q8TDD1 881 aaKnown RBP29.75■■■□□ 2.35
GFRA3-202ENST00000378362 MEGF6O75095 1541 aa29.75■■■□□ 2.35
GFRA3-202ENST00000378362 PTF1AQ7RTS3 328 aa29.75■■■□□ 2.35
GFRA3-202ENST00000378362 NPC1L1Q9UHC9 1359 aa29.73■■■□□ 2.35
GFRA3-202ENST00000378362 TNS2Q63HR2 1409 aa29.71■■■□□ 2.35
GFRA3-202ENST00000378362 RAPGEF4Q8WZA2 1011 aa29.71■■■□□ 2.35
GFRA3-202ENST00000378362 SF3B2Q13435 895 aaKnown RBP29.7■■■□□ 2.34
GFRA3-202ENST00000378362 OVOS2A0A0G2JMS6 1433 aa29.69■■■□□ 2.34
GFRA3-202ENST00000378362 ACSBG1Q96GR2 724 aa29.68■■■□□ 2.34
GFRA3-202ENST00000378362 CCDC125Q86Z20 511 aa29.68■■■□□ 2.34
GFRA3-202ENST00000378362 ZCRB1Q8TBF4 217 aaKnown RBP29.67■■■□□ 2.34
GFRA3-202ENST00000378362 TATP17735 454 aaPredicted RBP29.66■■■□□ 2.34
GFRA3-202ENST00000378362 EN1Q05925 392 aaPredicted RBP29.66■■■□□ 2.34
GFRA3-202ENST00000378362 AEBP1Q8IUX7 1158 aa29.66■■■□□ 2.34
GFRA3-202ENST00000378362 KCNQ2O43526 872 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms