RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SLC12A5Q9H2X9 1139 aa19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 RABEP1Q15276 862 aa19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 DNTTIP2Q5QJE6 756 aaKnown RBP19.25■□□□□ 0.67
CSNK1A1-202ENST00000377843 PTMAP06454 111 aaKnown RBP19.24■□□□□ 0.67
CSNK1A1-202ENST00000377843 PTPRTO14522 1441 aa19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 CDC45O75419 566 aa19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 GTF2F1P35269 517 aaKnown RBP eCLIP19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 FOXD4L5Q5VV16 416 aaPredicted RBP19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 SIRT2Q8IXJ6 389 aa19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 FOXD4L4Q8WXT5 416 aaPredicted RBP19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 STAC3Q96MF2 364 aa19.23■□□□□ 0.67
CSNK1A1-202ENST00000377843 POGZQ7Z3K3 1410 aa19.22■□□□□ 0.67
CSNK1A1-202ENST00000377843 SPDYE4A6NLX3 237 aa19.22■□□□□ 0.67
CSNK1A1-202ENST00000377843 KIF20AO95235 890 aa19.22■□□□□ 0.67
CSNK1A1-202ENST00000377843 INO80Q9ULG1 1556 aaPredicted RBP19.21■□□□□ 0.67
CSNK1A1-202ENST00000377843 NCBP3Q53F19 620 aaKnown RBP19.21■□□□□ 0.67
CSNK1A1-202ENST00000377843 PRIMPOLQ96LW4 560 aa19.21■□□□□ 0.67
CSNK1A1-202ENST00000377843 IGSF3O75054 1194 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 USP26Q9BXU7 913 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 KIDINS220Q9ULH0 1771 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 HMGN5P82970 282 aaKnown RBP19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 GCC1Q96CN9 775 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 CLTCL1P53675 1640 aa19.2■□□□□ 0.66
CSNK1A1-202ENST00000377843 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 ADGRF5Q8IZF2 1346 aa19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 PLEKHF1Q96S99 279 aa19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 BCL2L12Q9HB09 334 aa19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 TSPOAP1O95153 1857 aa19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
CSNK1A1-202ENST00000377843 TRPM2O94759 1503 aa19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 LETM1O95202 739 aaPredicted RBP19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 PDE4CQ08493 712 aa19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 ABCC11Q96J66 1382 aa19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 SENP3Q9H4L4 574 aaPredicted RBP19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 TTC12Q9H892 705 aaPredicted RBP19.18■□□□□ 0.66
CSNK1A1-202ENST00000377843 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
CSNK1A1-202ENST00000377843 TSPY26PQ9H489 355 aa19.17■□□□□ 0.66
CSNK1A1-202ENST00000377843 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
CSNK1A1-202ENST00000377843 KIF3AQ9Y496 699 aa19.16■□□□□ 0.66
CSNK1A1-202ENST00000377843 MED14O60244 1454 aa19.16■□□□□ 0.66
CSNK1A1-202ENST00000377843 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
CSNK1A1-202ENST00000377843 TMEM51Q9NW97 253 aa19.15■□□□□ 0.66
CSNK1A1-202ENST00000377843 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.651e-7■■■□□ 15.5
CSNK1A1-202ENST00000377843 ABCA6Q8N139 1617 aa19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 SLC24A1O60721 1099 aa19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 C16orf71Q8IYS4 520 aaPredicted RBP19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 USP25Q9UHP3 1055 aa19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 U2SURPO15042 1029 aaKnown RBP19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 FKBP5Q13451 457 aaPredicted RBP19.13■□□□□ 0.65
CSNK1A1-202ENST00000377843 MBD3O95983 291 aa19.12■□□□□ 0.65
CSNK1A1-202ENST00000377843 SPTLC3Q9NUV7 552 aa19.12■□□□□ 0.65
CSNK1A1-202ENST00000377843 KIAA1210Q9ULL0 1709 aa19.12■□□□□ 0.65
CSNK1A1-202ENST00000377843 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
CSNK1A1-202ENST00000377843 UGGT1Q9NYU2 1555 aa19.12■□□□□ 0.65
CSNK1A1-202ENST00000377843 OTUD7AQ8TE49 926 aaPredicted RBP19.11■□□□□ 0.65
CSNK1A1-202ENST00000377843 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
CSNK1A1-202ENST00000377843 SBNO2Q9Y2G9 1366 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 TTC22Q5TAA0 569 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 NEO1Q92859 1461 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 IL16Q14005 1332 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 ZBTB22O15209 634 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 GADD45BO75293 160 aaPredicted RBP19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 ALDH1L2Q3SY69 923 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
CSNK1A1-202ENST00000377843 MAP3K4Q9Y6R4 1608 aa19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 ST18O60284 1047 aa19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 MLECQ14165 292 aa19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 GDPD2Q9HCC8 539 aa19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 CFAP65Q6ZU64 1925 aaKnown RBP19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
CSNK1A1-202ENST00000377843 MLH3Q9UHC1 1453 aa19.08■□□□□ 0.65
CSNK1A1-202ENST00000377843 MROH1Q8NDA8 1641 aa19.08■□□□□ 0.65
CSNK1A1-202ENST00000377843 ADCY5O95622 1261 aa19.08■□□□□ 0.65
CSNK1A1-202ENST00000377843 ANKRD7Q92527 254 aa19.08■□□□□ 0.65
CSNK1A1-202ENST00000377843 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
CSNK1A1-202ENST00000377843 BRD1O95696 1058 aa19.08■□□□□ 0.64
CSNK1A1-202ENST00000377843 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
CSNK1A1-202ENST00000377843 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
CSNK1A1-202ENST00000377843 TRAK1Q9UPV9 953 aa19.08■□□□□ 0.64
CSNK1A1-202ENST00000377843 HECW2Q9P2P5 1572 aa19.07■□□□□ 0.64
CSNK1A1-202ENST00000377843 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
CSNK1A1-202ENST00000377843 NUTM2DQ5VT03 806 aaPredicted RBP19.06■□□□□ 0.64
CSNK1A1-202ENST00000377843 MYO3AQ8NEV4 1616 aa19.06■□□□□ 0.64
CSNK1A1-202ENST00000377843 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
CSNK1A1-202ENST00000377843 PIK3R4Q99570 1358 aa19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 SDSP20132 328 aa19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 INTS3Q68E01 1043 aaKnown RBP19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 MRPL50Q8N5N7 158 aaKnown RBP19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 TMX3Q96JJ7 454 aa19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 CGNQ9P2M7 1197 aaKnown RBP19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 BCL11BQ9C0K0 894 aaPredicted RBP19.05■□□□□ 0.64
CSNK1A1-202ENST00000377843 NAP1L2Q9ULW6 460 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms