RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 DHX57Q6P158 1386 aaKnown RBP14.13□□□□□ -0.15
C9orf85-202ENST00000377027 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
C9orf85-202ENST00000377027 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
C9orf85-202ENST00000377027 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
C9orf85-202ENST00000377027 TNS3Q68CZ2 1445 aa14.13□□□□□ -0.15
C9orf85-202ENST00000377027 NRAPQ86VF7 1730 aa14.12□□□□□ -0.15
C9orf85-202ENST00000377027 TRPC5Q9UL62 973 aaPredicted RBP14.12□□□□□ -0.15
C9orf85-202ENST00000377027 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
C9orf85-202ENST00000377027 SAFB2Q14151 953 aaKnown RBP eCLIP14.11□□□□□ -0.15
C9orf85-202ENST00000377027 KRT28Q7Z3Y7 464 aa14.1□□□□□ -0.15
C9orf85-202ENST00000377027 RALGAPBQ86X10 1494 aa14.1□□□□□ -0.15
C9orf85-202ENST00000377027 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
C9orf85-202ENST00000377027 ANKARQ7Z5J8 1434 aa14.09□□□□□ -0.15
C9orf85-202ENST00000377027 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
C9orf85-202ENST00000377027 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
C9orf85-202ENST00000377027 CABLES1Q8TDN4 633 aa14.08□□□□□ -0.16
C9orf85-202ENST00000377027 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.08□□□□□ -0.16
C9orf85-202ENST00000377027 ACIN1Q9UKV3 1341 aaKnown RBP14.08□□□□□ -0.16
C9orf85-202ENST00000377027 SBNO1A3KN83 1393 aa14.08□□□□□ -0.16
C9orf85-202ENST00000377027 ATAD2Q6PL18 1390 aa14.08□□□□□ -0.16
C9orf85-202ENST00000377027 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
C9orf85-202ENST00000377027 RYDENQ9NUL5 291 aaKnown RBP14.07□□□□□ -0.16
C9orf85-202ENST00000377027 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
C9orf85-202ENST00000377027 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
C9orf85-202ENST00000377027 GJD4Q96KN9 370 aaPredicted RBP14.06□□□□□ -0.16
C9orf85-202ENST00000377027 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
C9orf85-202ENST00000377027 TRAK1Q9UPV9 953 aa14.06□□□□□ -0.16
C9orf85-202ENST00000377027 ITSN1Q15811 1721 aa14.06□□□□□ -0.16
C9orf85-202ENST00000377027 ATP7BP35670 1465 aa14.06□□□□□ -0.16
C9orf85-202ENST00000377027 KIAA1210Q9ULL0 1709 aa14.05□□□□□ -0.16
C9orf85-202ENST00000377027 LHX8Q68G74 356 aa14.04□□□□□ -0.16
C9orf85-202ENST00000377027 UNC5CLQ8IV45 518 aa14.04□□□□□ -0.16
C9orf85-202ENST00000377027 DCAF11Q8TEB1 546 aa14.04□□□□□ -0.16
C9orf85-202ENST00000377027 KDM2AQ9Y2K7 1162 aa14.04□□□□□ -0.16
C9orf85-202ENST00000377027 MINK1Q8N4C8 1332 aaPredicted RBP14.04□□□□□ -0.16
C9orf85-202ENST00000377027 PHRF1Q9P1Y6 1649 aaKnown RBP14.04□□□□□ -0.16
C9orf85-202ENST00000377027 L3MBTL3Q96JM7 780 aaPredicted RBP14.03□□□□□ -0.16
C9orf85-202ENST00000377027 COL14A1Q05707 1796 aaKnown RBP14.03□□□□□ -0.16
C9orf85-202ENST00000377027 PPP1R37O75864 691 aa14.02□□□□□ -0.17
C9orf85-202ENST00000377027 HRCP23327 699 aa14.02□□□□□ -0.17
C9orf85-202ENST00000377027 POGKQ9P215 609 aa14.02□□□□□ -0.17
C9orf85-202ENST00000377027 ARHGEF10O15013 1369 aa14.01□□□□□ -0.17
C9orf85-202ENST00000377027 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
C9orf85-202ENST00000377027 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
C9orf85-202ENST00000377027 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
C9orf85-202ENST00000377027 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
C9orf85-202ENST00000377027 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
C9orf85-202ENST00000377027 PSME1Q06323 249 aa13.99□□□□□ -0.17
C9orf85-202ENST00000377027 VPS72Q15906 364 aa13.99□□□□□ -0.17
C9orf85-202ENST00000377027 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
C9orf85-202ENST00000377027 TMEM121BQ9BXQ6 578 aaPredicted RBP13.98□□□□□ -0.17
C9orf85-202ENST00000377027 ONECUT3O60422 494 aaPredicted RBP13.97□□□□□ -0.17
C9orf85-202ENST00000377027 LMOD2Q6P5Q4 547 aa13.97□□□□□ -0.17
C9orf85-202ENST00000377027 NRKQ7Z2Y5 1582 aa13.96□□□□□ -0.17
C9orf85-202ENST00000377027 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
C9orf85-202ENST00000377027 SEPT12Q8IYM1 358 aa13.96□□□□□ -0.17
C9orf85-202ENST00000377027 EIF3AQ14152 1382 aaKnown RBP13.96□□□□□ -0.18
C9orf85-202ENST00000377027 NBPF1Q3BBV0 1214 aa13.95□□□□□ -0.18
C9orf85-202ENST00000377027 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
C9orf85-202ENST00000377027 CFAP44Q96MT7 982 aa13.95□□□□□ -0.18
C9orf85-202ENST00000377027 BLMP54132 1417 aaPredicted RBP13.95□□□□□ -0.18
C9orf85-202ENST00000377027 TNS1Q9HBL0 1735 aaKnown RBP13.95□□□□□ -0.18
C9orf85-202ENST00000377027 G3V3G9 751 aa13.94□□□□□ -0.18
C9orf85-202ENST00000377027 HAP1P54257 671 aaPredicted RBP13.94□□□□□ -0.18
C9orf85-202ENST00000377027 STAC3Q96MF2 364 aa13.94□□□□□ -0.18
C9orf85-202ENST00000377027 LMO7Q8WWI1 1683 aa13.94□□□□□ -0.18
C9orf85-202ENST00000377027 POLR3AO14802 1390 aaPredicted RBP13.94□□□□□ -0.18
C9orf85-202ENST00000377027 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
C9orf85-202ENST00000377027 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
C9orf85-202ENST00000377027 DEFB132Q7Z7B7 95 aa13.93□□□□□ -0.18
C9orf85-202ENST00000377027 NUDT16Q96DE0 195 aaKnown RBP13.93□□□□□ -0.18
C9orf85-202ENST00000377027 BTG4Q9NY30 223 aa13.93□□□□□ -0.18
C9orf85-202ENST00000377027 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
C9orf85-202ENST00000377027 CDK19Q9BWU1 502 aa13.92□□□□□ -0.18
C9orf85-202ENST00000377027 RGPD1P0DJD0 1748 aa13.91□□□□□ -0.18
C9orf85-202ENST00000377027 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
C9orf85-202ENST00000377027 NGDNQ8NEJ9 315 aaKnown RBP13.9□□□□□ -0.18
C9orf85-202ENST00000377027 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
C9orf85-202ENST00000377027 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
C9orf85-202ENST00000377027 KIAA0232Q92628 1395 aa13.9□□□□□ -0.18
C9orf85-202ENST00000377027 ACEP12821 1306 aa13.9□□□□□ -0.19
C9orf85-202ENST00000377027 SPATA31A5Q5VU36 1347 aa13.9□□□□□ -0.19
C9orf85-202ENST00000377027 SPATA31A7Q8IWB4 1347 aa13.9□□□□□ -0.19
C9orf85-202ENST00000377027 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
C9orf85-202ENST00000377027 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
C9orf85-202ENST00000377027 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
C9orf85-202ENST00000377027 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
C9orf85-202ENST00000377027 PIK3C2AO00443 1686 aa13.88□□□□□ -0.19
C9orf85-202ENST00000377027 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
C9orf85-202ENST00000377027 CHRNA2Q15822 529 aa13.87□□□□□ -0.19
C9orf85-202ENST00000377027 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
C9orf85-202ENST00000377027 NUTM2GQ5VZR2 741 aa13.87□□□□□ -0.19
C9orf85-202ENST00000377027 C3orf67Q6ZVT6 689 aa13.87□□□□□ -0.19
C9orf85-202ENST00000377027 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
C9orf85-202ENST00000377027 PPIP5K1Q6PFW1 1433 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 USP19O94966 1318 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 LRP5O75197 1615 aa13.86□□□□□ -0.19
C9orf85-202ENST00000377027 COL18A1P39060 1754 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms