RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
HLA-A-201ENST00000376802 NFAT5O94916 1531 aa24.92■■□□□ 1.58
HLA-A-201ENST00000376802 TOM1L2Q6ZVM7 507 aa24.92■■□□□ 1.58
HLA-A-201ENST00000376802 SBNO2Q9Y2G9 1366 aa24.92■■□□□ 1.58
HLA-A-201ENST00000376802 KCNH5Q8NCM2 988 aa24.91■■□□□ 1.58
HLA-A-201ENST00000376802 KTN1Q86UP2 1357 aaKnown RBP24.91■■□□□ 1.58
HLA-A-201ENST00000376802 OVOS2A0A0G2JMS6 1433 aa24.9■■□□□ 1.58
HLA-A-201ENST00000376802 OVOS2A0A0J9YW53 1432 aa24.9■■□□□ 1.58
HLA-A-201ENST00000376802 OVOS2Q6IE36 1432 aa24.9■■□□□ 1.58
HLA-A-201ENST00000376802 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.58
HLA-A-201ENST00000376802 SOX12O15370 315 aa24.89■■□□□ 1.58
HLA-A-201ENST00000376802 DDB1Q16531 1140 aa24.89■■□□□ 1.58
HLA-A-201ENST00000376802 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.57
HLA-A-201ENST00000376802 CARD11Q9BXL7 1154 aa24.87■■□□□ 1.57
HLA-A-201ENST00000376802 RGPD3A6NKT7 1758 aaPredicted RBP24.87■■□□□ 1.57
HLA-A-201ENST00000376802 RGPD4Q7Z3J3 1758 aa24.87■■□□□ 1.57
HLA-A-201ENST00000376802 USP54Q70EL1 1684 aa24.87■■□□□ 1.57
HLA-A-201ENST00000376802 PTF1AQ7RTS3 328 aa24.86■■□□□ 1.57
HLA-A-201ENST00000376802 MARCH10Q8NA82 808 aaPredicted RBP24.86■■□□□ 1.57
HLA-A-201ENST00000376802 CARD10Q9BWT7 1032 aa24.86■■□□□ 1.57
HLA-A-201ENST00000376802 NBPF14Q5TI25 921 aa24.84■■□□□ 1.57
HLA-A-201ENST00000376802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.84■■□□□ 1.57
HLA-A-201ENST00000376802 CDCA7Q9BWT1 371 aaPredicted RBP24.84■■□□□ 1.57
HLA-A-201ENST00000376802 USP31Q70CQ4 1352 aa24.83■■□□□ 1.57
HLA-A-201ENST00000376802 ABCC6O95255 1503 aa24.83■■□□□ 1.57
HLA-A-201ENST00000376802 PLSCR1O15162 318 aa24.83■■□□□ 1.56
HLA-A-201ENST00000376802 BCL9O00512 1426 aa24.82■■□□□ 1.56
HLA-A-201ENST00000376802 LTN1O94822 1766 aa24.81■■□□□ 1.56
HLA-A-201ENST00000376802 CSB-PGBD3P0DP91 1061 aa24.81■■□□□ 1.56
HLA-A-201ENST00000376802 NME9Q86XW9 330 aa24.81■■□□□ 1.56
HLA-A-201ENST00000376802 BCL11BQ9C0K0 894 aaPredicted RBP24.81■■□□□ 1.56
HLA-A-201ENST00000376802 SLC12A5Q9H2X9 1139 aa24.81■■□□□ 1.56
HLA-A-201ENST00000376802 TONSLQ96HA7 1378 aa24.78■■□□□ 1.56
HLA-A-201ENST00000376802 TMC1Q8TDI8 760 aa24.78■■□□□ 1.56
HLA-A-201ENST00000376802 CCDC7Q96M83 1385 aa24.77■■□□□ 1.56
HLA-A-201ENST00000376802 PROM2Q8N271 834 aa24.77■■□□□ 1.56
HLA-A-201ENST00000376802 EXOC5O00471 708 aa24.76■■□□□ 1.55
HLA-A-201ENST00000376802 EDC4Q6P2E9 1401 aaKnown RBP24.75■■□□□ 1.55
HLA-A-201ENST00000376802 HDGFL2Q7Z4V5 671 aaPredicted RBP24.75■■□□□ 1.55
HLA-A-201ENST00000376802 A0A1W2PP64 1363 aa24.74■■□□□ 1.55
HLA-A-201ENST00000376802 ERBB3P21860 1342 aa24.74■■□□□ 1.55
HLA-A-201ENST00000376802 PUS7Q96PZ0 661 aaKnown RBP24.74■■□□□ 1.55
HLA-A-201ENST00000376802 ANO8Q9HCE9 1232 aaPredicted RBP24.73■■□□□ 1.55
HLA-A-201ENST00000376802 TESK2Q96S53 571 aa24.72■■□□□ 1.55
HLA-A-201ENST00000376802 TNS2Q63HR2 1409 aa24.72■■□□□ 1.55
HLA-A-201ENST00000376802 TERF2IPQ9NYB0 399 aa24.71■■□□□ 1.55
HLA-A-201ENST00000376802 CASZ1Q86V15 1759 aa24.71■■□□□ 1.55
HLA-A-201ENST00000376802 KCNQ2O43526 872 aa24.7■■□□□ 1.54
HLA-A-201ENST00000376802 SPON1Q9HCB6 807 aa24.7■■□□□ 1.54
HLA-A-201ENST00000376802 NLRP2Q9NX02 1062 aa24.7■■□□□ 1.54
HLA-A-201ENST00000376802 ST20-MTHFSA0A0A6YYL1 179 aa24.68■■□□□ 1.54
HLA-A-201ENST00000376802 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
HLA-A-201ENST00000376802 NHSQ6T4R5 1651 aa24.68■■□□□ 1.54
HLA-A-201ENST00000376802 PDGFDQ9GZP0 370 aaPredicted RBP24.67■■□□□ 1.54
HLA-A-201ENST00000376802 TXNRD1Q16881 649 aa24.65■■□□□ 1.54
HLA-A-201ENST00000376802 IL2RBP14784 551 aa24.64■■□□□ 1.54
HLA-A-201ENST00000376802 KAT6BQ8WYB5 2073 aa24.63■■□□□ 1.53
HLA-A-201ENST00000376802 NINLQ9Y2I6 1382 aa24.63■■□□□ 1.53
HLA-A-201ENST00000376802 IP6K1Q92551 441 aa24.62■■□□□ 1.53
HLA-A-201ENST00000376802 ACSBG1Q96GR2 724 aa24.61■■□□□ 1.53
HLA-A-201ENST00000376802 BTAF1O14981 1849 aa24.61■■□□□ 1.53
HLA-A-201ENST00000376802 FAM208AQ9UK61 1670 aaKnown RBP24.6■■□□□ 1.53
HLA-A-201ENST00000376802 PPP1R1BQ9UD71 204 aaPredicted RBP24.6■■□□□ 1.53
HLA-A-201ENST00000376802 FBLN1P23142 703 aa24.59■■□□□ 1.53
HLA-A-201ENST00000376802 RGPD2P0DJD1 1756 aa24.58■■□□□ 1.53
HLA-A-201ENST00000376802 SLC24A1O60721 1099 aa24.58■■□□□ 1.52
HLA-A-201ENST00000376802 SLC15A2Q16348 729 aa24.58■■□□□ 1.52
HLA-A-201ENST00000376802 ZBTB7AO95365 584 aa24.57■■□□□ 1.52
HLA-A-201ENST00000376802 STK32BQ9NY57 414 aa24.57■■□□□ 1.52
HLA-A-201ENST00000376802 MAP3K19Q56UN5 1328 aa24.57■■□□□ 1.52
HLA-A-201ENST00000376802 PTGER2P43116 358 aa24.56■■□□□ 1.52
HLA-A-201ENST00000376802 LTV1Q96GA3 475 aaPredicted RBP24.56■■□□□ 1.52
HLA-A-201ENST00000376802 COG3Q96JB2 828 aa24.56■■□□□ 1.52
HLA-A-201ENST00000376802 PAPPAQ13219 1627 aa24.55■■□□□ 1.52
HLA-A-201ENST00000376802 ANKRD36BQ8N2N9 1353 aa24.55■■□□□ 1.52
HLA-A-201ENST00000376802 MYOM1P52179 1685 aa24.55■■□□□ 1.52
HLA-A-201ENST00000376802 HOXC9P31274 260 aa24.53■■□□□ 1.52
HLA-A-201ENST00000376802 TRIM26Q12899 539 aaPredicted RBP24.52■■□□□ 1.52
HLA-A-201ENST00000376802 ATF5Q9Y2D1 282 aaPredicted RBP24.52■■□□□ 1.52
HLA-A-201ENST00000376802 SHANK3Q9BYB0 1731 aa24.51■■□□□ 1.51
HLA-A-201ENST00000376802 DDX54Q8TDD1 881 aaKnown RBP24.51■■□□□ 1.51
HLA-A-201ENST00000376802 LRRC4BQ9NT99 713 aa24.51■■□□□ 1.51
HLA-A-201ENST00000376802 USP47Q96K76 1375 aa24.5■■□□□ 1.51
HLA-A-201ENST00000376802 FYB1O15117 783 aa24.5■■□□□ 1.51
HLA-A-201ENST00000376802 AMPHP49418 695 aa24.49■■□□□ 1.51
HLA-A-201ENST00000376802 TMF1P82094 1093 aa24.48■■□□□ 1.51
HLA-A-201ENST00000376802 SGIP1Q9BQI5 828 aa24.48■■□□□ 1.51
HLA-A-201ENST00000376802 RRS1Q15050 365 aaKnown RBP24.47■■□□□ 1.51
HLA-A-201ENST00000376802 MTFR1LQ9H019 292 aa24.47■■□□□ 1.51
HLA-A-201ENST00000376802 YY1P25490 414 aa24.46■■□□□ 1.51
HLA-A-201ENST00000376802 GGNBP2Q9H3C7 697 aa24.46■■□□□ 1.51
HLA-A-201ENST00000376802 DOT1LQ8TEK3 1739 aa24.45■■□□□ 1.5
HLA-A-201ENST00000376802 ZNF827Q17R98 1081 aa24.45■■□□□ 1.5
HLA-A-201ENST00000376802 MEGF6O75095 1541 aa24.45■■□□□ 1.5
HLA-A-201ENST00000376802 KIF20BQ96Q89 1820 aa24.44■■□□□ 1.5
HLA-A-201ENST00000376802 RTL1A6NKG5 1358 aa24.44■■□□□ 1.5
HLA-A-201ENST00000376802 NBPF6Q5VWK0 638 aa24.43■■□□□ 1.5
HLA-A-201ENST00000376802 NBPF4Q96M43 638 aa24.43■■□□□ 1.5
HLA-A-201ENST00000376802 LY75O60449 1722 aa24.42■■□□□ 1.5
HLA-A-201ENST00000376802 PRIM1P49642 420 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms