RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ANTXR1Q9H6X2 564 aa17.62■□□□□ 0.41
TNFRSF1B-201ENST00000376259 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
TNFRSF1B-201ENST00000376259 KIAA1211Q6ZU35 1233 aa17.62■□□□□ 0.41
TNFRSF1B-201ENST00000376259 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
TNFRSF1B-201ENST00000376259 BMP2KLQ5H9B9 411 aa17.61■□□□□ 0.41
TNFRSF1B-201ENST00000376259 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
TNFRSF1B-201ENST00000376259 SLC52A1Q9NWF4 448 aa17.61■□□□□ 0.41
TNFRSF1B-201ENST00000376259 RTEL1-TNFRSF6BF6WH68 1400 aa17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 FOXO3O43524 673 aa17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 ARHGEF5Q12774 1597 aa17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 HAP1P54257 671 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1B-201ENST00000376259 SYCE3A1L190 88 aa17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 ADCY10Q96PN6 1610 aa17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
TNFRSF1B-201ENST00000376259 NUCB2P80303 420 aa17.58■□□□□ 0.41
TNFRSF1B-201ENST00000376259 BAG4O95429 457 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 FGD1P98174 961 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 PKP1Q13835 747 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 RABEP1Q15276 862 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 NLRP6P59044 892 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ALDH1L2Q3SY69 923 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
TNFRSF1B-201ENST00000376259 SDSP20132 328 aa17.57■□□□□ 0.4
TNFRSF1B-201ENST00000376259 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
TNFRSF1B-201ENST00000376259 A0A0G2JS52 829 aa17.56■□□□□ 0.4
TNFRSF1B-201ENST00000376259 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ASXL2Q76L83 1435 aa17.55■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ANXA1P04083 346 aa17.55■□□□□ 0.4
TNFRSF1B-201ENST00000376259 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ABCC2Q92887 1545 aa17.55■□□□□ 0.4
TNFRSF1B-201ENST00000376259 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 FOSBP53539 338 aa17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 CFAP44Q96MT7 982 aa17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
TNFRSF1B-201ENST00000376259 FIBPO43427 364 aa17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 AIMP1Q12904 312 aaKnown RBP17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ERC2O15083 957 aa17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 DRC7Q8IY82 874 aa17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 CROCC2H7BZ55 1655 aa17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
TNFRSF1B-201ENST00000376259 PTMSP20962 102 aa17.52■□□□□ 0.4
TNFRSF1B-201ENST00000376259 HDGFP51858 240 aaKnown RBP17.52■□□□□ 0.4
TNFRSF1B-201ENST00000376259 G2E3Q7L622 706 aa17.52■□□□□ 0.4
TNFRSF1B-201ENST00000376259 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
TNFRSF1B-201ENST00000376259 ABCC11Q96J66 1382 aa17.52■□□□□ 0.39
TNFRSF1B-201ENST00000376259 ZNF330Q9Y3S2 320 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1B-201ENST00000376259 WASLO00401 505 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1B-201ENST00000376259 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1B-201ENST00000376259 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
TNFRSF1B-201ENST00000376259 CIZ1Q9ULV3 898 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1B-201ENST00000376259 NPATQ14207 1427 aa17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 GNAI2P04899 355 aa17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 CEBPAP49715 358 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 SIRT2Q8IXJ6 389 aa17.5■□□□□ 0.39
TNFRSF1B-201ENST00000376259 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
TNFRSF1B-201ENST00000376259 FBXW7Q969H0 707 aa17.49■□□□□ 0.39
TNFRSF1B-201ENST00000376259 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 CWC27Q6UX04 472 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 LRRCC1Q9C099 1032 aa17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 PRIM1P49642 420 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 HDGFL1Q5TGJ6 251 aa17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 DIAPH3Q9NSV4 1193 aa17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1B-201ENST00000376259 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1B-201ENST00000376259 CCDC173Q0VFZ6 552 aa17.47■□□□□ 0.39
TNFRSF1B-201ENST00000376259 TEFQ10587 303 aa17.47■□□□□ 0.39
TNFRSF1B-201ENST00000376259 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1B-201ENST00000376259 EIF4A2Q14240 407 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 IL16Q14005 1332 aa17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 SYAP1Q96A49 352 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 SYNMO15061 1565 aa17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 ZNF830Q96NB3 372 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 SIL1Q9H173 461 aa17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 KDM5AP29375 1690 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1B-201ENST00000376259 CLCN1P35523 988 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 FERMT3Q86UX7 667 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 CLTCL1P53675 1640 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ZSCAN23Q3MJ62 389 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 ZNF518AQ6AHZ1 1483 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 SPC24Q8NBT2 197 aa17.45■□□□□ 0.38
TNFRSF1B-201ENST00000376259 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
TNFRSF1B-201ENST00000376259 SNX21Q969T3 373 aa17.44■□□□□ 0.38
TNFRSF1B-201ENST00000376259 PPFIA3O75145 1194 aa17.44■□□□□ 0.38
TNFRSF1B-201ENST00000376259 NSD2O96028 1365 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms