RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 COG6Q9Y2V7 657 aa15.63■□□□□ 0.09
UBR4-203ENST00000375225 FTSJ3Q8IY81 847 aaKnown RBP15.63■□□□□ 0.09
UBR4-203ENST00000375225 VIRMAQ69YN4 1812 aaKnown RBP15.62■□□□□ 0.09
UBR4-203ENST00000375225 KIF1AQ12756 1690 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 TTC21AQ8NDW8 1320 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 IPO8O15397 1037 aaKnown RBP15.62■□□□□ 0.09
UBR4-203ENST00000375225 COG3Q96JB2 828 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 C19orf44Q9H6X5 657 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 TTC21BQ7Z4L5 1316 aa15.62■□□□□ 0.09
UBR4-203ENST00000375225 TMEM94Q12767 1356 aa15.61■□□□□ 0.09
UBR4-203ENST00000375225 PANK1Q8TE04 598 aa15.61■□□□□ 0.09
UBR4-203ENST00000375225 CHMP4BQ9H444 224 aaKnown RBP15.61■□□□□ 0.09
UBR4-203ENST00000375225 RGS3P49796 1198 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 NME9Q86XW9 330 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 DZIP1LQ8IYY4 767 aaKnown RBP15.6■□□□□ 0.09
UBR4-203ENST00000375225 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 KIF16BQ96L93 1317 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
UBR4-203ENST00000375225 MAP2P11137 1827 aaKnown RBP15.6■□□□□ 0.09
UBR4-203ENST00000375225 RIPK4P57078 832 aa15.59■□□□□ 0.09
UBR4-203ENST00000375225 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
UBR4-203ENST00000375225 MVPQ14764 893 aaKnown RBP15.59■□□□□ 0.09
UBR4-203ENST00000375225 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
UBR4-203ENST00000375225 ATF3P18847 181 aa15.58■□□□□ 0.09
UBR4-203ENST00000375225 XIRP1Q702N8 1843 aaKnown RBP15.58■□□□□ 0.09
UBR4-203ENST00000375225 MSH6P52701 1360 aa15.58■□□□□ 0.09
UBR4-203ENST00000375225 CDK12Q9NYV4 1490 aaPredicted RBP15.58■□□□□ 0.08
UBR4-203ENST00000375225 ALDH1L2Q3SY69 923 aa15.58■□□□□ 0.08
UBR4-203ENST00000375225 C8orf34Q49A92 452 aa15.58■□□□□ 0.08
UBR4-203ENST00000375225 ESCO1Q5FWF5 840 aa15.58■□□□□ 0.08
UBR4-203ENST00000375225 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
UBR4-203ENST00000375225 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
UBR4-203ENST00000375225 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
UBR4-203ENST00000375225 TRIM35Q9UPQ4 493 aa15.57■□□□□ 0.08
UBR4-203ENST00000375225 OVOS2A0A0J9YW53 1432 aa15.57■□□□□ 0.08
UBR4-203ENST00000375225 OVOS2Q6IE36 1432 aa15.57■□□□□ 0.08
UBR4-203ENST00000375225 PIK3C2AO00443 1686 aa15.57■□□□□ 0.08
UBR4-203ENST00000375225 C1orf167Q5SNV9 1468 aa15.56■□□□□ 0.08
UBR4-203ENST00000375225 IGHDP01880 384 aa15.56■□□□□ 0.08
UBR4-203ENST00000375225 NBR1Q14596 966 aa15.56■□□□□ 0.08
UBR4-203ENST00000375225 CADPS2Q86UW7 1296 aa15.56■□□□□ 0.08
UBR4-203ENST00000375225 LRRC7Q96NW7 1537 aa15.55■□□□□ 0.08
UBR4-203ENST00000375225 EXOSC9Q06265 439 aaKnown RBP15.55■□□□□ 0.08
UBR4-203ENST00000375225 POLKQ9UBT6 870 aa15.55■□□□□ 0.08
UBR4-203ENST00000375225 MST1RQ04912 1400 aa15.54■□□□□ 0.08
UBR4-203ENST00000375225 USP31Q70CQ4 1352 aa15.54■□□□□ 0.08
UBR4-203ENST00000375225 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
UBR4-203ENST00000375225 NFE2L2Q16236 605 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 ATF7IPQ6VMQ6 1270 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 PRKAR2BP31323 418 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
UBR4-203ENST00000375225 GNAI1P63096 354 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 PSME1Q06323 249 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 BCL2L13Q9BXK5 485 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 RSPH6AQ9H0K4 717 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
UBR4-203ENST00000375225 BRPF1P55201 1214 aaPredicted RBP15.52■□□□□ 0.07
UBR4-203ENST00000375225 BECN1Q14457 450 aa15.52■□□□□ 0.07
UBR4-203ENST00000375225 TSR2Q969E8 191 aaKnown RBP15.52■□□□□ 0.07
UBR4-203ENST00000375225 RLBP1P12271 317 aa15.5■□□□□ 0.07
UBR4-203ENST00000375225 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
UBR4-203ENST00000375225 SKAP1Q86WV1 359 aa15.5■□□□□ 0.07
UBR4-203ENST00000375225 ORAI2Q96SN7 254 aa15.5■□□□□ 0.07
UBR4-203ENST00000375225 IFT57Q9NWB7 429 aa15.5■□□□□ 0.07
UBR4-203ENST00000375225 MARF1Q9Y4F3 1742 aaKnown RBP15.5■□□□□ 0.07
UBR4-203ENST00000375225 ITPRIPQ8IWB1 547 aa15.49■□□□□ 0.07
UBR4-203ENST00000375225 ABTB2Q8N961 1025 aa15.49■□□□□ 0.07
UBR4-203ENST00000375225 SSH1Q8WYL5 1049 aa15.49■□□□□ 0.07
UBR4-203ENST00000375225 TRPM3Q9HCF6 1732 aaPredicted RBP15.49■□□□□ 0.07
UBR4-203ENST00000375225 NLRP6P59044 892 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 PCDHB15Q9Y5E8 787 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 TRIM27P14373 513 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 IL13P35225 146 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 DEKP35659 375 aaKnown RBP15.48■□□□□ 0.07
UBR4-203ENST00000375225 ARHGAP45Q92619 1136 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
UBR4-203ENST00000375225 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
UBR4-203ENST00000375225 FOXO3O43524 673 aa15.47■□□□□ 0.07
UBR4-203ENST00000375225 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
UBR4-203ENST00000375225 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
UBR4-203ENST00000375225 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 EIF5BO60841 1220 aaKnown RBP15.44■□□□□ 0.06
UBR4-203ENST00000375225 FBLN1P23142 703 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 KRT28Q7Z3Y7 464 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 LAS1LQ9Y4W2 734 aaKnown RBP15.44■□□□□ 0.06
UBR4-203ENST00000375225 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 SBNO1A3KN83 1393 aa15.44■□□□□ 0.06
UBR4-203ENST00000375225 LTN1O94822 1766 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 FLT4P35916 1363 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 SOX12O15370 315 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 HMOX1P09601 288 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 NUTM2GQ5VZR2 741 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
UBR4-203ENST00000375225 CFAP44Q96MT7 982 aa15.42■□□□□ 0.06
UBR4-203ENST00000375225 API5Q9BZZ5 524 aaKnown RBP15.42■□□□□ 0.06
UBR4-203ENST00000375225 TNNQ9UQP3 1299 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms