RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
CCDC40-202ENST00000374876 PHRF1Q9P1Y6 1649 aaKnown RBP20.49■□□□□ 0.87
CCDC40-202ENST00000374876 AFF2P51816 1311 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 FBLN1P23142 703 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 RRP1P56182 461 aaKnown RBP20.48■□□□□ 0.87
CCDC40-202ENST00000374876 COG3Q96JB2 828 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 MARF1Q9Y4F3 1742 aaKnown RBP20.48■□□□□ 0.87
CCDC40-202ENST00000374876 KIAA0232Q92628 1395 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 PRDM11Q9NQV5 511 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 ADAMTS8Q9UP79 889 aa20.48■□□□□ 0.87
CCDC40-202ENST00000374876 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
CCDC40-202ENST00000374876 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
CCDC40-202ENST00000374876 CDCA7LQ96GN5 454 aa20.46■□□□□ 0.87
CCDC40-202ENST00000374876 SLIT3O75094 1523 aa20.45■□□□□ 0.86
CCDC40-202ENST00000374876 FNBP4Q8N3X1 1017 aaPredicted RBP20.45■□□□□ 0.86
CCDC40-202ENST00000374876 OVOS2A0A0J9YW53 1432 aa20.44■□□□□ 0.86
CCDC40-202ENST00000374876 OVOS2Q6IE36 1432 aa20.44■□□□□ 0.86
CCDC40-202ENST00000374876 USP21Q9UK80 565 aa20.44■□□□□ 0.86
CCDC40-202ENST00000374876 BTG4Q9NY30 223 aa20.43■□□□□ 0.86
CCDC40-202ENST00000374876 POTEAQ6S8J7 498 aa20.42■□□□□ 0.86
CCDC40-202ENST00000374876 KIF20BQ96Q89 1820 aa20.41■□□□□ 0.86
CCDC40-202ENST00000374876 ZNF772Q68DY9 489 aaPredicted RBP20.41■□□□□ 0.86
CCDC40-202ENST00000374876 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
CCDC40-202ENST00000374876 CPDO75976 1380 aa20.41■□□□□ 0.86
CCDC40-202ENST00000374876 BCL9LQ86UU0 1499 aa20.4■□□□□ 0.86
CCDC40-202ENST00000374876 USP54Q70EL1 1684 aa20.4■□□□□ 0.86
CCDC40-202ENST00000374876 QTRT2Q9H974 415 aaKnown RBP20.4■□□□□ 0.86
CCDC40-202ENST00000374876 SLIT2O94813 1529 aa20.4■□□□□ 0.86
CCDC40-202ENST00000374876 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.86
CCDC40-202ENST00000374876 UNC5CLQ8IV45 518 aa20.39■□□□□ 0.86
CCDC40-202ENST00000374876 NFAT5O94916 1531 aa20.39■□□□□ 0.86
CCDC40-202ENST00000374876 AXIN2Q9Y2T1 843 aa20.39■□□□□ 0.85
CCDC40-202ENST00000374876 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
CCDC40-202ENST00000374876 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
CCDC40-202ENST00000374876 STRN4Q9NRL3 753 aa20.37■□□□□ 0.85
CCDC40-202ENST00000374876 COL14A1Q05707 1796 aaKnown RBP20.37■□□□□ 0.85
CCDC40-202ENST00000374876 PLCH1Q4KWH8 1693 aa20.37■□□□□ 0.85
CCDC40-202ENST00000374876 CAMTA1Q9Y6Y1 1673 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 EVA1CP58658 441 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 AATKQ6ZMQ8 1374 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 MAP3K19Q56UN5 1328 aa20.35■□□□□ 0.85
CCDC40-202ENST00000374876 ANP32EQ9BTT0 268 aa20.34■□□□□ 0.85
CCDC40-202ENST00000374876 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
CCDC40-202ENST00000374876 CCDC9Q9Y3X0 531 aaKnown RBP20.34■□□□□ 0.85
CCDC40-202ENST00000374876 LTN1O94822 1766 aa20.33■□□□□ 0.84
CCDC40-202ENST00000374876 AMPHP49418 695 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 COL18A1P39060 1754 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 NWD2Q9ULI1 1742 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 NSD2O96028 1365 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 LMO7Q8WWI1 1683 aa20.32■□□□□ 0.84
CCDC40-202ENST00000374876 PPM1GO15355 546 aaPredicted RBP20.31■□□□□ 0.84
CCDC40-202ENST00000374876 LARP1Q6PKG0 1096 aaKnown RBP20.31■□□□□ 0.84
CCDC40-202ENST00000374876 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
CCDC40-202ENST00000374876 RXRBP28702 533 aa20.31■□□□□ 0.84
CCDC40-202ENST00000374876 VPS72Q15906 364 aa20.31■□□□□ 0.84
CCDC40-202ENST00000374876 ATRNO75882 1429 aa20.3■□□□□ 0.84
CCDC40-202ENST00000374876 GOLGA2Q08379 1002 aa20.3■□□□□ 0.84
CCDC40-202ENST00000374876 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
CCDC40-202ENST00000374876 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
CCDC40-202ENST00000374876 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
CCDC40-202ENST00000374876 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
CCDC40-202ENST00000374876 IP6K1Q92551 441 aa20.29■□□□□ 0.84
CCDC40-202ENST00000374876 NRAPQ86VF7 1730 aa20.29■□□□□ 0.84
CCDC40-202ENST00000374876 HOXC9P31274 260 aa20.29■□□□□ 0.84
CCDC40-202ENST00000374876 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
CCDC40-202ENST00000374876 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
CCDC40-202ENST00000374876 LTV1Q96GA3 475 aaPredicted RBP20.29■□□□□ 0.84
CCDC40-202ENST00000374876 POLKQ9UBT6 870 aa20.29■□□□□ 0.84
CCDC40-202ENST00000374876 ILDR2Q71H61 639 aa20.28■□□□□ 0.84
CCDC40-202ENST00000374876 COL5A2P05997 1499 aaPredicted RBP20.28■□□□□ 0.84
CCDC40-202ENST00000374876 PLIN1O60240 522 aa20.27■□□□□ 0.84
CCDC40-202ENST00000374876 CSB-PGBD3P0DP91 1061 aa20.27■□□□□ 0.84
CCDC40-202ENST00000374876 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
CCDC40-202ENST00000374876 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
CCDC40-202ENST00000374876 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.84
CCDC40-202ENST00000374876 HSP90AB2PQ58FF8 381 aa20.27■□□□□ 0.84
CCDC40-202ENST00000374876 TOM1L2Q6ZVM7 507 aa20.26■□□□□ 0.83
CCDC40-202ENST00000374876 ANKRD24Q8TF21 1146 aa20.26■□□□□ 0.83
CCDC40-202ENST00000374876 SPATA31A5Q5VU36 1347 aa20.25■□□□□ 0.83
CCDC40-202ENST00000374876 SPATA31A7Q8IWB4 1347 aa20.25■□□□□ 0.83
CCDC40-202ENST00000374876 APAF1O14727 1248 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 MSH5O43196 834 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 PEAK1Q9H792 1746 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 ERBB3P21860 1342 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 WDR17Q8IZU2 1322 aa20.24■□□□□ 0.83
CCDC40-202ENST00000374876 GLI3P10071 1580 aa20.22■□□□□ 0.83
CCDC40-202ENST00000374876 SLFN5Q08AF3 891 aa20.22■□□□□ 0.83
CCDC40-202ENST00000374876 FAM98CQ17RN3 349 aaKnown RBP20.22■□□□□ 0.83
CCDC40-202ENST00000374876 FLT4P35916 1363 aa20.22■□□□□ 0.83
CCDC40-202ENST00000374876 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
CCDC40-202ENST00000374876 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
CCDC40-202ENST00000374876 CRBNQ96SW2 442 aa20.21■□□□□ 0.83
CCDC40-202ENST00000374876 CRB1P82279 1406 aa20.21■□□□□ 0.83
CCDC40-202ENST00000374876 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
CCDC40-202ENST00000374876 ABCC6O95255 1503 aa20.2■□□□□ 0.82
CCDC40-202ENST00000374876 MTHFSP49914 203 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms