RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 WDR17Q8IZU2 1322 aa19.78■□□□□ 0.76
CXCL12-202ENST00000374426 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
CXCL12-202ENST00000374426 KCNH5Q8NCM2 988 aa19.76■□□□□ 0.75
CXCL12-202ENST00000374426 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
CXCL12-202ENST00000374426 AKAP12Q02952 1782 aa19.75■□□□□ 0.75
CXCL12-202ENST00000374426 SOX12O15370 315 aa19.75■□□□□ 0.75
CXCL12-202ENST00000374426 PTF1AQ7RTS3 328 aa19.75■□□□□ 0.75
CXCL12-202ENST00000374426 SBF2Q86WG5 1849 aa19.74■□□□□ 0.75
CXCL12-202ENST00000374426 PLSCR1O15162 318 aa19.74■□□□□ 0.75
CXCL12-202ENST00000374426 MARCH10Q8NA82 808 aaPredicted RBP19.74■□□□□ 0.75
CXCL12-202ENST00000374426 WNK3Q9BYP7 1800 aa19.74■□□□□ 0.75
CXCL12-202ENST00000374426 NFAT5O94916 1531 aa19.73■□□□□ 0.75
CXCL12-202ENST00000374426 CDCA7Q9BWT1 371 aaPredicted RBP19.73■□□□□ 0.75
CXCL12-202ENST00000374426 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
CXCL12-202ENST00000374426 BCL11BQ9C0K0 894 aaPredicted RBP19.73■□□□□ 0.75
CXCL12-202ENST00000374426 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
CXCL12-202ENST00000374426 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
CXCL12-202ENST00000374426 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
CXCL12-202ENST00000374426 BCL9O00512 1426 aa19.72■□□□□ 0.75
CXCL12-202ENST00000374426 RGPD5Q99666 1765 aa19.72■□□□□ 0.75
CXCL12-202ENST00000374426 CSB-PGBD3P0DP91 1061 aa19.71■□□□□ 0.75
CXCL12-202ENST00000374426 SPON1Q9HCB6 807 aa19.71■□□□□ 0.75
CXCL12-202ENST00000374426 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
CXCL12-202ENST00000374426 SBNO2Q9Y2G9 1366 aa19.7■□□□□ 0.74
CXCL12-202ENST00000374426 KCNQ2O43526 872 aa19.69■□□□□ 0.74
CXCL12-202ENST00000374426 PROM2Q8N271 834 aa19.69■□□□□ 0.74
CXCL12-202ENST00000374426 MON2Q7Z3U7 1717 aa19.68■□□□□ 0.74
CXCL12-202ENST00000374426 CD163L1Q9NR16 1453 aa19.67■□□□□ 0.74
CXCL12-202ENST00000374426 ABCC6O95255 1503 aa19.67■□□□□ 0.74
CXCL12-202ENST00000374426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.67■□□□□ 0.74
CXCL12-202ENST00000374426 USP31Q70CQ4 1352 aa19.67■□□□□ 0.74
CXCL12-202ENST00000374426 CCDC7Q96M83 1385 aa19.67■□□□□ 0.74
CXCL12-202ENST00000374426 EXOC5O00471 708 aa19.66■□□□□ 0.74
CXCL12-202ENST00000374426 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
CXCL12-202ENST00000374426 NME9Q86XW9 330 aa19.65■□□□□ 0.74
CXCL12-202ENST00000374426 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
CXCL12-202ENST00000374426 TNS2Q63HR2 1409 aa19.65■□□□□ 0.74
CXCL12-202ENST00000374426 PDGFDQ9GZP0 370 aaPredicted RBP19.64■□□□□ 0.73
CXCL12-202ENST00000374426 CASZ1Q86V15 1759 aa19.63■□□□□ 0.73
CXCL12-202ENST00000374426 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
CXCL12-202ENST00000374426 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
CXCL12-202ENST00000374426 ERBB3P21860 1342 aa19.63■□□□□ 0.73
CXCL12-202ENST00000374426 TXNRD1Q16881 649 aa19.62■□□□□ 0.73
CXCL12-202ENST00000374426 UTRNP46939 3433 aa19.61■□□□□ 0.73
CXCL12-202ENST00000374426 TMC1Q8TDI8 760 aa19.61■□□□□ 0.73
CXCL12-202ENST00000374426 SLC12A5Q9H2X9 1139 aa19.61■□□□□ 0.73
CXCL12-202ENST00000374426 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
CXCL12-202ENST00000374426 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
CXCL12-202ENST00000374426 EDC4Q6P2E9 1401 aaKnown RBP19.59■□□□□ 0.73
CXCL12-202ENST00000374426 ZBTB7AO95365 584 aa19.58■□□□□ 0.72
CXCL12-202ENST00000374426 YY1P25490 414 aa19.58■□□□□ 0.72
CXCL12-202ENST00000374426 A0A1W2PP64 1363 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 LTN1O94822 1766 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 IL2RBP14784 551 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 PTGER2P43116 358 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 SLC15A2Q16348 729 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 ACSBG1Q96GR2 724 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 STK32BQ9NY57 414 aa19.57■□□□□ 0.72
CXCL12-202ENST00000374426 NHSQ6T4R5 1651 aa19.56■□□□□ 0.72
CXCL12-202ENST00000374426 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
CXCL12-202ENST00000374426 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
CXCL12-202ENST00000374426 ATF5Q9Y2D1 282 aaPredicted RBP19.54■□□□□ 0.72
CXCL12-202ENST00000374426 TONSLQ96HA7 1378 aa19.54■□□□□ 0.72
CXCL12-202ENST00000374426 MYOM1P52179 1685 aa19.52■□□□□ 0.72
CXCL12-202ENST00000374426 DCAF8L1A6NGE4 600 aa19.52■□□□□ 0.72
CXCL12-202ENST00000374426 IP6K1Q92551 441 aa19.51■□□□□ 0.71
CXCL12-202ENST00000374426 TESK2Q96S53 571 aa19.51■□□□□ 0.71
CXCL12-202ENST00000374426 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
CXCL12-202ENST00000374426 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
CXCL12-202ENST00000374426 BTAF1O14981 1849 aa19.49■□□□□ 0.71
CXCL12-202ENST00000374426 SGIP1Q9BQI5 828 aa19.49■□□□□ 0.71
CXCL12-202ENST00000374426 ST20-MTHFSA0A0A6YYL1 179 aa19.48■□□□□ 0.71
CXCL12-202ENST00000374426 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
CXCL12-202ENST00000374426 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-202ENST00000374426 FHDC1Q9C0D6 1143 aaPredicted RBP19.47■□□□□ 0.71
CXCL12-202ENST00000374426 LRRC4BQ9NT99 713 aa19.47■□□□□ 0.71
CXCL12-202ENST00000374426 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
CXCL12-202ENST00000374426 SYT17Q9BSW7 474 aa19.46■□□□□ 0.71
CXCL12-202ENST00000374426 MAP3K19Q56UN5 1328 aa19.46■□□□□ 0.71
CXCL12-202ENST00000374426 FBLN1P23142 703 aa19.45■□□□□ 0.7
CXCL12-202ENST00000374426 DDX54Q8TDD1 881 aaKnown RBP19.45■□□□□ 0.7
CXCL12-202ENST00000374426 COG3Q96JB2 828 aa19.45■□□□□ 0.7
CXCL12-202ENST00000374426 FAM208AQ9UK61 1670 aaKnown RBP19.44■□□□□ 0.7
CXCL12-202ENST00000374426 HOXC9P31274 260 aa19.44■□□□□ 0.7
CXCL12-202ENST00000374426 GOLGB1Q14789 3259 aaKnown RBP19.42■□□□□ 0.7
CXCL12-202ENST00000374426 SLC24A1O60721 1099 aa19.41■□□□□ 0.7
CXCL12-202ENST00000374426 AMPHP49418 695 aa19.41■□□□□ 0.7
CXCL12-202ENST00000374426 AKT1S1Q96B36 256 aa19.41■□□□□ 0.7
CXCL12-202ENST00000374426 ARXQ96QS3 562 aa19.41■□□□□ 0.7
CXCL12-202ENST00000374426 ANKRD36BQ8N2N9 1353 aa19.41■□□□□ 0.7
CXCL12-202ENST00000374426 SLC27A3Q5K4L6 730 aa19.4■□□□□ 0.7
CXCL12-202ENST00000374426 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.69
CXCL12-202ENST00000374426 MEGF6O75095 1541 aa19.39■□□□□ 0.69
CXCL12-202ENST00000374426 NSD2O96028 1365 aa19.38■□□□□ 0.69
CXCL12-202ENST00000374426 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
CXCL12-202ENST00000374426 MAP3K5Q99683 1374 aa19.38■□□□□ 0.69
CXCL12-202ENST00000374426 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
CXCL12-202ENST00000374426 RTL1A6NKG5 1358 aa19.37■□□□□ 0.69
CXCL12-202ENST00000374426 FYB1O15117 783 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms