RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 RGPD3A6NKT7 1758 aaPredicted RBP29.08■■■□□ 2.25
CHPF-202ENST00000373891 RGPD4Q7Z3J3 1758 aa29.08■■■□□ 2.25
CHPF-202ENST00000373891 CPSF1Q10570 1443 aaKnown RBP29.07■■■□□ 2.24
CHPF-202ENST00000373891 WDR17Q8IZU2 1322 aa29.06■■■□□ 2.24
CHPF-202ENST00000373891 PPP1R1BQ9UD71 204 aaPredicted RBP29.06■■■□□ 2.24
CHPF-202ENST00000373891 TTC21BQ7Z4L5 1316 aa29.05■■■□□ 2.24
CHPF-202ENST00000373891 ROCK2O75116 1388 aaKnown RBP29.04■■■□□ 2.24
CHPF-202ENST00000373891 NEUROD1Q13562 356 aa29.04■■■□□ 2.24
CHPF-202ENST00000373891 SPON1Q9HCB6 807 aa29.04■■■□□ 2.24
CHPF-202ENST00000373891 C11orf95C9JLR9 678 aaPredicted RBP29.03■■■□□ 2.24
CHPF-202ENST00000373891 CSB-PGBD3P0DP91 1061 aa29.03■■■□□ 2.24
CHPF-202ENST00000373891 KCNQ2O43526 872 aa29.02■■■□□ 2.24
CHPF-202ENST00000373891 MARCH10Q8NA82 808 aaPredicted RBP29.02■■■□□ 2.24
CHPF-202ENST00000373891 ANO8Q9HCE9 1232 aaPredicted RBP29.02■■■□□ 2.24
CHPF-202ENST00000373891 ARHGEF25Q86VW2 580 aa29.01■■■□□ 2.23
CHPF-202ENST00000373891 CASZ1Q86V15 1759 aa28.99■■■□□ 2.23
CHPF-202ENST00000373891 PLSCR1O15162 318 aa28.99■■■□□ 2.23
CHPF-202ENST00000373891 BCL11BQ9C0K0 894 aaPredicted RBP28.99■■■□□ 2.23
CHPF-202ENST00000373891 MON2Q7Z3U7 1717 aa28.98■■■□□ 2.23
CHPF-202ENST00000373891 KCNH5Q8NCM2 988 aa28.98■■■□□ 2.23
CHPF-202ENST00000373891 ZNF692Q9BU19 519 aaPredicted RBP28.98■■■□□ 2.23
CHPF-202ENST00000373891 NFAT5O94916 1531 aa28.98■■■□□ 2.23
CHPF-202ENST00000373891 KTN1Q86UP2 1357 aaKnown RBP28.97■■■□□ 2.23
CHPF-202ENST00000373891 KAT6BQ8WYB5 2073 aa28.97■■■□□ 2.23
CHPF-202ENST00000373891 PDGFDQ9GZP0 370 aaPredicted RBP28.96■■■□□ 2.23
CHPF-202ENST00000373891 TTC21AQ8NDW8 1320 aa28.95■■■□□ 2.23
CHPF-202ENST00000373891 YY1P25490 414 aa28.95■■■□□ 2.22
CHPF-202ENST00000373891 CARD10Q9BWT7 1032 aa28.95■■■□□ 2.22
CHPF-202ENST00000373891 CDCA7Q9BWT1 371 aaPredicted RBP28.94■■■□□ 2.22
CHPF-202ENST00000373891 LTN1O94822 1766 aa28.93■■■□□ 2.22
CHPF-202ENST00000373891 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.93■■■□□ 2.22
CHPF-202ENST00000373891 PROM2Q8N271 834 aa28.93■■■□□ 2.22
CHPF-202ENST00000373891 EXOC5O00471 708 aa28.9■■■□□ 2.22
CHPF-202ENST00000373891 ZBTB7AO95365 584 aa28.9■■■□□ 2.22
CHPF-202ENST00000373891 NINLQ9Y2I6 1382 aa28.89■■■□□ 2.22
CHPF-202ENST00000373891 MYOM1P52179 1685 aa28.89■■■□□ 2.21
CHPF-202ENST00000373891 BCL9O00512 1426 aa28.88■■■□□ 2.21
CHPF-202ENST00000373891 TXNRD1Q16881 649 aa28.87■■■□□ 2.21
CHPF-202ENST00000373891 CCDC7Q96M83 1385 aa28.87■■■□□ 2.21
CHPF-202ENST00000373891 TNS2Q63HR2 1409 aa28.86■■■□□ 2.21
CHPF-202ENST00000373891 NME9Q86XW9 330 aa28.86■■■□□ 2.21
CHPF-202ENST00000373891 DCAF8L1A6NGE4 600 aa28.85■■■□□ 2.21
CHPF-202ENST00000373891 ACSBG1Q96GR2 724 aa28.85■■■□□ 2.21
CHPF-202ENST00000373891 ATF5Q9Y2D1 282 aaPredicted RBP28.85■■■□□ 2.21
CHPF-202ENST00000373891 NHSQ6T4R5 1651 aa28.85■■■□□ 2.21
CHPF-202ENST00000373891 USP54Q70EL1 1684 aa28.85■■■□□ 2.21
CHPF-202ENST00000373891 ABCC6O95255 1503 aa28.84■■■□□ 2.21
CHPF-202ENST00000373891 TMC1Q8TDI8 760 aa28.84■■■□□ 2.21
CHPF-202ENST00000373891 STK32BQ9NY57 414 aa28.84■■■□□ 2.21
CHPF-202ENST00000373891 NLRP2Q9NX02 1062 aa28.83■■■□□ 2.21
CHPF-202ENST00000373891 CD163L1Q9NR16 1453 aa28.83■■■□□ 2.21
CHPF-202ENST00000373891 BTAF1O14981 1849 aa28.8■■■□□ 2.2
CHPF-202ENST00000373891 ERBB3P21860 1342 aa28.8■■■□□ 2.2
CHPF-202ENST00000373891 CARD11Q9BXL7 1154 aa28.8■■■□□ 2.2
CHPF-202ENST00000373891 USP31Q70CQ4 1352 aa28.79■■■□□ 2.2
CHPF-202ENST00000373891 SBNO2Q9Y2G9 1366 aa28.79■■■□□ 2.2
CHPF-202ENST00000373891 SLC15A2Q16348 729 aa28.79■■■□□ 2.2
CHPF-202ENST00000373891 PTGER2P43116 358 aa28.78■■■□□ 2.2
CHPF-202ENST00000373891 SLC12A5Q9H2X9 1139 aa28.77■■■□□ 2.2
CHPF-202ENST00000373891 IL2RBP14784 551 aa28.75■■■□□ 2.19
CHPF-202ENST00000373891 HDGFL2Q7Z4V5 671 aaPredicted RBP28.75■■■□□ 2.19
CHPF-202ENST00000373891 ANKRD24Q8TF21 1146 aa28.75■■■□□ 2.19
CHPF-202ENST00000373891 PAPPAQ13219 1627 aa28.72■■■□□ 2.19
CHPF-202ENST00000373891 A0A1W2PP64 1363 aa28.71■■■□□ 2.19
CHPF-202ENST00000373891 EDC4Q6P2E9 1401 aaKnown RBP28.7■■■□□ 2.19
CHPF-202ENST00000373891 FHDC1Q9C0D6 1143 aaPredicted RBP28.7■■■□□ 2.18
CHPF-202ENST00000373891 LTV1Q96GA3 475 aaPredicted RBP28.69■■■□□ 2.18
CHPF-202ENST00000373891 MTFR1LQ9H019 292 aa28.68■■■□□ 2.18
CHPF-202ENST00000373891 RGPD2P0DJD1 1756 aa28.67■■■□□ 2.18
CHPF-202ENST00000373891 SYT17Q9BSW7 474 aa28.66■■■□□ 2.18
CHPF-202ENST00000373891 TERF2IPQ9NYB0 399 aa28.66■■■□□ 2.18
CHPF-202ENST00000373891 FAM208AQ9UK61 1670 aaKnown RBP28.65■■■□□ 2.18
CHPF-202ENST00000373891 ZNF827Q17R98 1081 aa28.65■■■□□ 2.18
CHPF-202ENST00000373891 CHD4Q14839 1912 aa28.65■■■□□ 2.18
CHPF-202ENST00000373891 DDX54Q8TDD1 881 aaKnown RBP28.64■■■□□ 2.18
CHPF-202ENST00000373891 SGIP1Q9BQI5 828 aa28.64■■■□□ 2.18
CHPF-202ENST00000373891 TONSLQ96HA7 1378 aa28.63■■■□□ 2.17
CHPF-202ENST00000373891 LRRC4BQ9NT99 713 aa28.63■■■□□ 2.17
CHPF-202ENST00000373891 DOT1LQ8TEK3 1739 aa28.61■■■□□ 2.17
CHPF-202ENST00000373891 TUBGCP6Q96RT7 1819 aa28.61■■■□□ 2.17
CHPF-202ENST00000373891 UTRNP46939 3433 aa28.6■■■□□ 2.17
CHPF-202ENST00000373891 FBLN1P23142 703 aa28.6■■■□□ 2.17
CHPF-202ENST00000373891 IP6K1Q92551 441 aa28.6■■■□□ 2.17
CHPF-202ENST00000373891 ARXQ96QS3 562 aa28.59■■■□□ 2.17
CHPF-202ENST00000373891 SHANK3Q9BYB0 1731 aa28.57■■■□□ 2.16
CHPF-202ENST00000373891 KCNQ4P56696 695 aa28.57■■■□□ 2.16
CHPF-202ENST00000373891 SYTL4Q96C24 671 aaPredicted RBP28.57■■■□□ 2.16
CHPF-202ENST00000373891 QSER1Q2KHR3 1735 aa28.55■■■□□ 2.16
CHPF-202ENST00000373891 MAP3K19Q56UN5 1328 aa28.55■■■□□ 2.16
CHPF-202ENST00000373891 KLHL34Q8N239 644 aa28.55■■■□□ 2.16
CHPF-202ENST00000373891 ZNF784Q8NCA9 323 aaPredicted RBP28.55■■■□□ 2.16
CHPF-202ENST00000373891 COG3Q96JB2 828 aa28.54■■■□□ 2.16
CHPF-202ENST00000373891 ST20-MTHFSA0A0A6YYL1 179 aa28.53■■■□□ 2.16
CHPF-202ENST00000373891 HOXC9P31274 260 aa28.53■■■□□ 2.16
CHPF-202ENST00000373891 AMPHP49418 695 aa28.53■■■□□ 2.16
CHPF-202ENST00000373891 AKT1S1Q96B36 256 aa28.52■■■□□ 2.16
CHPF-202ENST00000373891 TESK2Q96S53 571 aa28.52■■■□□ 2.16
CHPF-202ENST00000373891 LY75O60449 1722 aa28.52■■■□□ 2.16
CHPF-202ENST00000373891 PRIM1P49642 420 aaKnown RBP28.51■■■□□ 2.15
CHPF-202ENST00000373891 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms