RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 KDM2BQ8NHM5 1336 aa25.31■■□□□ 1.64
HDAC1-201ENST00000373548 HSP90AB2PQ58FF8 381 aa25.31■■□□□ 1.64
HDAC1-201ENST00000373548 MAP3K19Q56UN5 1328 aa25.31■■□□□ 1.64
HDAC1-201ENST00000373548 PANK1Q8TE04 598 aa25.3■■□□□ 1.64
HDAC1-201ENST00000373548 NWD1Q149M9 1564 aa25.29■■□□□ 1.64
HDAC1-201ENST00000373548 AEBP1Q8IUX7 1158 aa25.28■■□□□ 1.64
HDAC1-201ENST00000373548 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
HDAC1-201ENST00000373548 SBNO1A3KN83 1393 aa25.27■■□□□ 1.64
HDAC1-201ENST00000373548 NLRP6P59044 892 aa25.27■■□□□ 1.64
HDAC1-201ENST00000373548 SULT6B1Q6IMI4 303 aa25.26■■□□□ 1.63
HDAC1-201ENST00000373548 THUMPD2Q9BTF0 503 aaKnown RBP25.26■■□□□ 1.63
HDAC1-201ENST00000373548 COG6Q9Y2V7 657 aa25.26■■□□□ 1.63
HDAC1-201ENST00000373548 FLT4P35916 1363 aa25.26■■□□□ 1.63
HDAC1-201ENST00000373548 CENPQQ7L2Z9 268 aaPredicted RBP25.25■■□□□ 1.63
HDAC1-201ENST00000373548 TNNQ9UQP3 1299 aa25.25■■□□□ 1.63
HDAC1-201ENST00000373548 TCERG1O14776 1098 aaKnown RBP25.24■■□□□ 1.63
HDAC1-201ENST00000373548 RLBP1P12271 317 aa25.24■■□□□ 1.63
HDAC1-201ENST00000373548 CALD1Q05682 793 aaKnown RBP25.24■■□□□ 1.63
HDAC1-201ENST00000373548 LMOD3Q0VAK6 560 aa25.22■■□□□ 1.63
HDAC1-201ENST00000373548 NUTM2GQ5VZR2 741 aa25.22■■□□□ 1.63
HDAC1-201ENST00000373548 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
HDAC1-201ENST00000373548 SMC4Q9NTJ3 1288 aa25.22■■□□□ 1.63
HDAC1-201ENST00000373548 ABTB2Q8N961 1025 aa25.21■■□□□ 1.63
HDAC1-201ENST00000373548 LAS1LQ9Y4W2 734 aaKnown RBP25.21■■□□□ 1.63
HDAC1-201ENST00000373548 ARHGEF10O15013 1369 aa25.21■■□□□ 1.63
HDAC1-201ENST00000373548 PAK3O75914 559 aaPredicted RBP25.21■■□□□ 1.63
HDAC1-201ENST00000373548 IFT57Q9NWB7 429 aa25.21■■□□□ 1.63
HDAC1-201ENST00000373548 AMPHP49418 695 aa25.2■■□□□ 1.62
HDAC1-201ENST00000373548 ZNF853P0CG23 659 aa25.19■■□□□ 1.62
HDAC1-201ENST00000373548 ZKSCAN2Q63HK3 967 aa25.19■■□□□ 1.62
HDAC1-201ENST00000373548 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
HDAC1-201ENST00000373548 CLUAP1Q96AJ1 413 aa25.19■■□□□ 1.62
HDAC1-201ENST00000373548 GNAI1P63096 354 aa25.19■■□□□ 1.62
HDAC1-201ENST00000373548 ESCO1Q5FWF5 840 aa25.18■■□□□ 1.62
HDAC1-201ENST00000373548 SKAP1Q86WV1 359 aa25.18■■□□□ 1.62
HDAC1-201ENST00000373548 FAM83GA6ND36 823 aa25.18■■□□□ 1.62
HDAC1-201ENST00000373548 KIF24Q5T7B8 1368 aa25.17■■□□□ 1.62
HDAC1-201ENST00000373548 MS4A1P11836 297 aa25.15■■□□□ 1.62
HDAC1-201ENST00000373548 MBIPQ9NS73 344 aa25.15■■□□□ 1.62
HDAC1-201ENST00000373548 KDRP35968 1356 aa25.15■■□□□ 1.62
HDAC1-201ENST00000373548 DCTN1Q14203 1278 aa25.15■■□□□ 1.62
HDAC1-201ENST00000373548 CFAP44Q96MT7 982 aa25.15■■□□□ 1.62
HDAC1-201ENST00000373548 AAMPQ13685 434 aa25.14■■□□□ 1.62
HDAC1-201ENST00000373548 ALDH1L2Q3SY69 923 aa25.14■■□□□ 1.62
HDAC1-201ENST00000373548 PROSER2Q86WR7 435 aaPredicted RBP25.14■■□□□ 1.62
HDAC1-201ENST00000373548 DZIP1LQ8IYY4 767 aaKnown RBP25.14■■□□□ 1.62
HDAC1-201ENST00000373548 IGSF1Q8N6C5 1336 aa25.14■■□□□ 1.61
HDAC1-201ENST00000373548 HOXC9P31274 260 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 LTN1O94822 1766 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 TRIM27P14373 513 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 PSME1Q06323 249 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 ZNF428Q96B54 188 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 EYA1Q99502 592 aa25.13■■□□□ 1.61
HDAC1-201ENST00000373548 IGHDP01880 384 aa25.12■■□□□ 1.61
HDAC1-201ENST00000373548 MVPQ14764 893 aaKnown RBP25.12■■□□□ 1.61
HDAC1-201ENST00000373548 ORAI2Q96SN7 254 aa25.12■■□□□ 1.61
HDAC1-201ENST00000373548 NOB1Q9ULX3 412 aaKnown RBP25.12■■□□□ 1.61
HDAC1-201ENST00000373548 KDM4FA0A1W2PPD8 638 aa25.11■■□□□ 1.61
HDAC1-201ENST00000373548 ATF7IPQ6VMQ6 1270 aa25.11■■□□□ 1.61
HDAC1-201ENST00000373548 FTSJ3Q8IY81 847 aaKnown RBP25.11■■□□□ 1.61
HDAC1-201ENST00000373548 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
HDAC1-201ENST00000373548 NFAT5O94916 1531 aa25.11■■□□□ 1.61
HDAC1-201ENST00000373548 VAMP4O75379 141 aa25.1■■□□□ 1.61
HDAC1-201ENST00000373548 TSPYL6Q8N831 410 aa25.1■■□□□ 1.61
HDAC1-201ENST00000373548 STRCP1A6NGW2 1772 aa25.08■■□□□ 1.61
HDAC1-201ENST00000373548 RTL1A6NKG5 1358 aa25.08■■□□□ 1.61
HDAC1-201ENST00000373548 BRPF1P55201 1214 aaPredicted RBP25.08■■□□□ 1.61
HDAC1-201ENST00000373548 PCDHB15Q9Y5E8 787 aa25.07■■□□□ 1.6
HDAC1-201ENST00000373548 PDE4AP27815 886 aa25.06■■□□□ 1.6
HDAC1-201ENST00000373548 MCM10Q7L590 875 aa25.06■■□□□ 1.6
HDAC1-201ENST00000373548 IPO8O15397 1037 aaKnown RBP25.06■■□□□ 1.6
HDAC1-201ENST00000373548 FOXO3O43524 673 aa25.06■■□□□ 1.6
HDAC1-201ENST00000373548 MTHFSDQ2M296 383 aaKnown RBP25.06■■□□□ 1.6
HDAC1-201ENST00000373548 C8orf58Q8NAV2 365 aa25.05■■□□□ 1.6
HDAC1-201ENST00000373548 C19orf44Q9H6X5 657 aa25.05■■□□□ 1.6
HDAC1-201ENST00000373548 KIF1AQ12756 1690 aa25.05■■□□□ 1.6
HDAC1-201ENST00000373548 C1orf167Q5SNV9 1468 aa25.05■■□□□ 1.6
HDAC1-201ENST00000373548 TWISTNBQ3B726 338 aaPredicted RBP25.04■■□□□ 1.6
HDAC1-201ENST00000373548 TRPM3Q9HCF6 1732 aaPredicted RBP25.04■■□□□ 1.6
HDAC1-201ENST00000373548 ELL2O00472 640 aaPredicted RBP25.04■■□□□ 1.6
HDAC1-201ENST00000373548 BACH2Q9BYV9 841 aa25.04■■□□□ 1.6
HDAC1-201ENST00000373548 MRPL50Q8N5N7 158 aaKnown RBP25.03■■□□□ 1.6
HDAC1-201ENST00000373548 CRB1P82279 1406 aa25.03■■□□□ 1.6
HDAC1-201ENST00000373548 PHRF1Q9P1Y6 1649 aaKnown RBP25.03■■□□□ 1.6
HDAC1-201ENST00000373548 CHL1O00533 1208 aa25.03■■□□□ 1.6
HDAC1-201ENST00000373548 XPCQ01831 940 aaPredicted RBP25.03■■□□□ 1.6
HDAC1-201ENST00000373548 TMEM57Q8N5G2 664 aa25.01■■□□□ 1.59
HDAC1-201ENST00000373548 IP6K1Q92551 441 aa25.01■■□□□ 1.59
HDAC1-201ENST00000373548 LTV1Q96GA3 475 aaPredicted RBP25.01■■□□□ 1.59
HDAC1-201ENST00000373548 ITPRIPQ8IWB1 547 aa25.01■■□□□ 1.59
HDAC1-201ENST00000373548 KCNH5Q8NCM2 988 aa25.01■■□□□ 1.59
HDAC1-201ENST00000373548 DDX19BQ9UMR2 479 aa25.01■■□□□ 1.59
HDAC1-201ENST00000373548 TMEM94Q12767 1356 aa25■■□□□ 1.59
HDAC1-201ENST00000373548 SLIT3O75094 1523 aa25■■□□□ 1.59
HDAC1-201ENST00000373548 HSPA2P54652 639 aa25■■□□□ 1.59
HDAC1-201ENST00000373548 GAS2L2Q8NHY3 880 aa25■■□□□ 1.59
HDAC1-201ENST00000373548 MSH5O43196 834 aa24.99■■□□□ 1.59
HDAC1-201ENST00000373548 RGS3P49796 1198 aa24.97■■□□□ 1.59
HDAC1-201ENST00000373548 ARHGAP45Q92619 1136 aa24.97■■□□□ 1.59
HDAC1-201ENST00000373548 MST1RQ04912 1400 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms