RNA–Protein interactions for RNA: ENST00000373190.5

PTPRT-204, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,559 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-204ENST00000373190 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 MAP3K11Q16584 847 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 DYNC1I1O14576 645 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 CDK5RAP3Q96JB5 506 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 SFPQP23246 707 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRT-204ENST00000373190 DDX11Q96FC9 970 aa10.38□□□□□ -0.75
PTPRT-204ENST00000373190 MCM3P25205 808 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 SYCP1Q15431 976 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 CTDP1Q9Y5B0 961 aaPredicted RBP10.37□□□□□ -0.75
PTPRT-204ENST00000373190 MCM5P33992 734 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 SMTNL1A8MU46 457 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 BCAR3O75815 825 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 ARHGAP29Q52LW3 1261 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
PTPRT-204ENST00000373190 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
PTPRT-204ENST00000373190 PLEKHH1Q9ULM0 1364 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
PTPRT-204ENST00000373190 NEFHP12036 1026 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
PTPRT-204ENST00000373190 PNISRQ8TF01 805 aaKnown RBP10.37□□□□□ -0.75
PTPRT-204ENST00000373190 ANKRD50Q9ULJ7 1429 aa10.36□□□□□ -0.75
PTPRT-204ENST00000373190 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
PTPRT-204ENST00000373190 MTHFSP49914 203 aa10.36□□□□□ -0.75
PTPRT-204ENST00000373190 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
PTPRT-204ENST00000373190 WDR63Q8IWG1 891 aa10.36□□□□□ -0.75
PTPRT-204ENST00000373190 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
PTPRT-204ENST00000373190 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
PTPRT-204ENST00000373190 FILIP1Q7Z7B0 1213 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 TBC1D2BQ9UPU7 963 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 NCOA2Q15596 1464 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 CCT4P50991 539 aaKnown RBP10.35□□□□□ -0.75
PTPRT-204ENST00000373190 TWISTNBQ3B726 338 aaPredicted RBP10.35□□□□□ -0.75
PTPRT-204ENST00000373190 TAX1BP1Q86VP1 789 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 RBM33Q96EV2 1170 aaKnown RBP10.35□□□□□ -0.75
PTPRT-204ENST00000373190 ZSCAN31Q96LW9 406 aaPredicted RBP10.35□□□□□ -0.75
PTPRT-204ENST00000373190 GBP2P32456 591 aaPredicted RBP10.35□□□□□ -0.75
PTPRT-204ENST00000373190 ATF7IPQ6VMQ6 1270 aa10.35□□□□□ -0.75
PTPRT-204ENST00000373190 STK3Q13188 491 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 ATP2B1P20020 1258 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 CFAP100Q494V2 611 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 EZRP15311 586 aaKnown RBP10.34□□□□□ -0.75
PTPRT-204ENST00000373190 EXOSC9Q06265 439 aaKnown RBP10.34□□□□□ -0.75
PTPRT-204ENST00000373190 CDKL5O76039 1030 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 EHBP1L1Q8N3D4 1523 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 KIAA1328Q86T90 577 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 SLC26A8Q96RN1 970 aa10.34□□□□□ -0.75
PTPRT-204ENST00000373190 NKTRP30414 1462 aaKnown RBP10.34□□□□□ -0.75
PTPRT-204ENST00000373190 MICALCLQ6ZW33 695 aa10.33□□□□□ -0.76
PTPRT-204ENST00000373190 CASQ1P31415 396 aa10.33□□□□□ -0.76
PTPRT-204ENST00000373190 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
PTPRT-204ENST00000373190 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
PTPRT-204ENST00000373190 ZHX1Q9UKY1 873 aaPredicted RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 C16orf45Q96MC5 204 aaPredicted RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
PTPRT-204ENST00000373190 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
PTPRT-204ENST00000373190 GAS2L2Q8NHY3 880 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 PDRG1Q9NUG6 133 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 KIF5CO60282 957 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 CAMK4Q16566 473 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 BLOC1S2Q6QNY1 142 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 KDM4AO75164 1064 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 IMMTQ16891 758 aaKnown RBP10.32□□□□□ -0.76
PTPRT-204ENST00000373190 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPRT-204ENST00000373190 FYB1O15117 783 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 CASTP20810 708 aaKnown RBP10.32□□□□□ -0.76
PTPRT-204ENST00000373190 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
PTPRT-204ENST00000373190 NEMFO60524 1076 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 SCAND2PQ9GZW5 306 aaPredicted RBP10.31□□□□□ -0.76
PTPRT-204ENST00000373190 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 GGNBP2Q9H3C7 697 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 ANKRD62A6NC57 917 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 KRT32Q14532 448 aa10.31□□□□□ -0.76
PTPRT-204ENST00000373190 TNPO1Q92973 898 aaKnown RBP10.31□□□□□ -0.76
PTPRT-204ENST00000373190 ZNF397Q8NF99 534 aaPredicted RBP10.31□□□□□ -0.76
PTPRT-204ENST00000373190 JAKMIP1Q96N16 626 aaKnown RBP10.31□□□□□ -0.76
PTPRT-204ENST00000373190 POLR3GO15318 223 aaPredicted RBP10.3□□□□□ -0.76
PTPRT-204ENST00000373190 KRT18P05783 430 aaKnown RBP10.3□□□□□ -0.76
PTPRT-204ENST00000373190 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 PAXBP1Q9Y5B6 917 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 CTAGE5O15320 804 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 TNNT1P13805 278 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 EVA1CP58658 441 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 ZNF428Q96B54 188 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 DHX37Q8IY37 1157 aaKnown RBP10.3□□□□□ -0.76
PTPRT-204ENST00000373190 HECW1Q76N89 1606 aa10.3□□□□□ -0.76
PTPRT-204ENST00000373190 GOLGA6L10A0A0M3HER8 536 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms