RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 AXIN2Q9Y2T1 843 aa32.58■■■□□ 2.81
CITED4-201ENST00000372638 GGNBP2Q9H3C7 697 aa32.57■■■□□ 2.8
CITED4-201ENST00000372638 A0A0G2JS52 829 aa32.56■■■□□ 2.8
CITED4-201ENST00000372638 MYT1Q01538 1121 aa32.56■■■□□ 2.8
CITED4-201ENST00000372638 NSD3Q9BZ95 1437 aa32.56■■■□□ 2.8
CITED4-201ENST00000372638 USP35Q9P2H5 1018 aa32.55■■■□□ 2.8
CITED4-201ENST00000372638 UPF1Q92900 1129 aaKnown RBP eCLIP32.52■■■□□ 2.89e-7■■■■□ 25.2
CITED4-201ENST00000372638 ABCC6O95255 1503 aa32.52■■■□□ 2.8
CITED4-201ENST00000372638 TCP11L2Q8N4U5 519 aa32.51■■■□□ 2.8
CITED4-201ENST00000372638 CRB1P82279 1406 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 LTN1O94822 1766 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 RGPD5Q99666 1765 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 BARGINQ6ZT62 677 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 TOM1L2Q6ZVM7 507 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 PANK3Q9H999 370 aa32.51■■■□□ 2.79
CITED4-201ENST00000372638 KIF20BQ96Q89 1820 aa32.5■■■□□ 2.79
CITED4-201ENST00000372638 WDR17Q8IZU2 1322 aa32.5■■■□□ 2.79
CITED4-201ENST00000372638 BRWD3Q6RI45 1802 aa32.5■■■□□ 2.79
CITED4-201ENST00000372638 THRAP3Q9Y2W1 955 aaKnown RBP32.5■■■□□ 2.79
CITED4-201ENST00000372638 CGNL1Q0VF96 1302 aa32.49■■■□□ 2.79
CITED4-201ENST00000372638 KIF7Q2M1P5 1343 aa32.49■■■□□ 2.79
CITED4-201ENST00000372638 CSB-PGBD3P0DP91 1061 aa32.49■■■□□ 2.79
CITED4-201ENST00000372638 KRT27Q7Z3Y8 459 aa32.48■■■□□ 2.79
CITED4-201ENST00000372638 FBLN1P23142 703 aa32.45■■■□□ 2.78
CITED4-201ENST00000372638 IP6K1Q92551 441 aa32.45■■■□□ 2.78
CITED4-201ENST00000372638 MAP3K19Q56UN5 1328 aa32.44■■■□□ 2.78
CITED4-201ENST00000372638 THSD7AQ9UPZ6 1657 aa32.43■■■□□ 2.78
CITED4-201ENST00000372638 AMPHP49418 695 aa32.42■■■□□ 2.78
CITED4-201ENST00000372638 CARD10Q9BWT7 1032 aa32.42■■■□□ 2.78
CITED4-201ENST00000372638 BLMP54132 1417 aaPredicted RBP32.41■■■□□ 2.78
CITED4-201ENST00000372638 ERBB3P21860 1342 aa32.4■■■□□ 2.78
CITED4-201ENST00000372638 RRS1Q15050 365 aaKnown RBP32.39■■■□□ 2.78
CITED4-201ENST00000372638 ANKRD24Q8TF21 1146 aa32.39■■■□□ 2.78
CITED4-201ENST00000372638 HOXC9P31274 260 aa32.38■■■□□ 2.77
CITED4-201ENST00000372638 CCDC7Q96M83 1385 aa32.36■■■□□ 2.77
CITED4-201ENST00000372638 KNSTRNQ9Y448 316 aa32.36■■■□□ 2.77
CITED4-201ENST00000372638 CCDC125Q86Z20 511 aa32.35■■■□□ 2.77
CITED4-201ENST00000372638 NLRP2Q9NX02 1062 aa32.35■■■□□ 2.77
CITED4-201ENST00000372638 PDE3BQ13370 1112 aa32.34■■■□□ 2.77
CITED4-201ENST00000372638 CDCA7Q9BWT1 371 aaPredicted RBP32.34■■■□□ 2.77
CITED4-201ENST00000372638 RTL1A6NKG5 1358 aa32.34■■■□□ 2.77
CITED4-201ENST00000372638 WASHC2AQ641Q2 1341 aa32.33■■■□□ 2.77
CITED4-201ENST00000372638 LTV1Q96GA3 475 aaPredicted RBP32.32■■■□□ 2.76
CITED4-201ENST00000372638 NSD2O96028 1365 aa32.31■■■□□ 2.76
CITED4-201ENST00000372638 KIF24Q5T7B8 1368 aa32.3■■■□□ 2.76
CITED4-201ENST00000372638 FAM182BQ5T319 152 aa32.29■■■□□ 2.76
CITED4-201ENST00000372638 PARP4Q9UKK3 1724 aaKnown RBP32.29■■■□□ 2.76
CITED4-201ENST00000372638 ANKRD26Q9UPS8 1709 aa32.28■■■□□ 2.76
CITED4-201ENST00000372638 DDB1Q16531 1140 aa32.27■■■□□ 2.76
CITED4-201ENST00000372638 FLT4P35916 1363 aa32.26■■■□□ 2.76
CITED4-201ENST00000372638 FAM196AQ6ZSG2 479 aa32.26■■■□□ 2.75
CITED4-201ENST00000372638 EMILIN1Q9Y6C2 1016 aa32.26■■■□□ 2.75
CITED4-201ENST00000372638 WNK3Q9BYP7 1800 aa32.24■■■□□ 2.75
CITED4-201ENST00000372638 INSRP06213 1382 aa32.24■■■□□ 2.75
CITED4-201ENST00000372638 FAM208AQ9UK61 1670 aaKnown RBP32.24■■■□□ 2.75
CITED4-201ENST00000372638 PER1O15534 1290 aaPredicted RBP32.24■■■□□ 2.75
CITED4-201ENST00000372638 TNNT2P45379 298 aaPredicted RBP32.24■■■□□ 2.75
CITED4-201ENST00000372638 HSP90AB2PQ58FF8 381 aa32.24■■■□□ 2.75
CITED4-201ENST00000372638 MORC1Q86VD1 984 aa32.24■■■□□ 2.75
CITED4-201ENST00000372638 MAP2P11137 1827 aaKnown RBP32.24■■■□□ 2.75
CITED4-201ENST00000372638 DISP2A7MBM2 1401 aa32.23■■■□□ 2.75
CITED4-201ENST00000372638 PPM1GO15355 546 aaPredicted RBP32.23■■■□□ 2.75
CITED4-201ENST00000372638 SF3B2Q13435 895 aaKnown RBP32.23■■■□□ 2.75
CITED4-201ENST00000372638 AMER1Q5JTC6 1135 aaPredicted RBP32.22■■■□□ 2.75
CITED4-201ENST00000372638 POLKQ9UBT6 870 aa32.22■■■□□ 2.75
CITED4-201ENST00000372638 PEAK1Q9H792 1746 aa32.21■■■□□ 2.75
CITED4-201ENST00000372638 SMG6Q86US8 1419 aaKnown RBP32.21■■■□□ 2.75
CITED4-201ENST00000372638 EXOC5O00471 708 aa32.21■■■□□ 2.75
CITED4-201ENST00000372638 IL2RBP14784 551 aa32.21■■■□□ 2.75
CITED4-201ENST00000372638 LRRC37A3O60309 1634 aa32.19■■■□□ 2.74
CITED4-201ENST00000372638 ZEB1P37275 1124 aaPredicted RBP32.17■■■□□ 2.74
CITED4-201ENST00000372638 NBPF6Q5VWK0 638 aa32.16■■■□□ 2.74
CITED4-201ENST00000372638 NBPF4Q96M43 638 aa32.16■■■□□ 2.74
CITED4-201ENST00000372638 EP400Q96L91 3159 aa32.16■■■□□ 2.74
CITED4-201ENST00000372638 RGPD2P0DJD1 1756 aa32.14■■■□□ 2.74
CITED4-201ENST00000372638 MARCH10Q8NA82 808 aaPredicted RBP32.13■■■□□ 2.73
CITED4-201ENST00000372638 OVOS2A0A0G2JMS6 1433 aa32.12■■■□□ 2.73
CITED4-201ENST00000372638 TRIM37O94972 964 aa32.11■■■□□ 2.73
CITED4-201ENST00000372638 TNS2Q63HR2 1409 aa32.11■■■□□ 2.73
CITED4-201ENST00000372638 RGPD1P0DJD0 1748 aa32.1■■■□□ 2.73
CITED4-201ENST00000372638 BAG6P46379 1132 aa32.09■■■□□ 2.73
CITED4-201ENST00000372638 CC2D1BQ5T0F9 858 aaKnown RBP32.09■■■□□ 2.73
CITED4-201ENST00000372638 DEFB132Q7Z7B7 95 aa32.09■■■□□ 2.73
CITED4-201ENST00000372638 NPC1L1Q9UHC9 1359 aa32.09■■■□□ 2.73
CITED4-201ENST00000372638 USHBP1Q8N6Y0 703 aa32.08■■■□□ 2.73
CITED4-201ENST00000372638 RAPGEF4Q8WZA2 1011 aa32.04■■■□□ 2.72
CITED4-201ENST00000372638 BCL9O00512 1426 aa32.04■■■□□ 2.72
CITED4-201ENST00000372638 EIF4A2Q14240 407 aaKnown RBP32.02■■■□□ 2.72
CITED4-201ENST00000372638 EYA1Q99502 592 aa32.01■■■□□ 2.72
CITED4-201ENST00000372638 TNS1Q9HBL0 1735 aaKnown RBP32.01■■■□□ 2.72
CITED4-201ENST00000372638 APBA3O96018 575 aa32■■■□□ 2.71
CITED4-201ENST00000372638 TATP17735 454 aaPredicted RBP32■■■□□ 2.71
CITED4-201ENST00000372638 CNGB1Q14028 1251 aaPredicted RBP32■■■□□ 2.71
CITED4-201ENST00000372638 ZCRB1Q8TBF4 217 aaKnown RBP32■■■□□ 2.71
CITED4-201ENST00000372638 MEGF6O75095 1541 aa32■■■□□ 2.71
CITED4-201ENST00000372638 EN1Q05925 392 aaPredicted RBP32■■■□□ 2.71
CITED4-201ENST00000372638 DDX54Q8TDD1 881 aaKnown RBP32■■■□□ 2.71
CITED4-201ENST00000372638 SBF2Q86WG5 1849 aa31.99■■■□□ 2.71
CITED4-201ENST00000372638 BCL11BQ9C0K0 894 aaPredicted RBP31.97■■■□□ 2.71
CITED4-201ENST00000372638 NCAPD2Q15021 1401 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms