RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 BCAR3O75815 825 aa12.41□□□□□ -0.42
KDM4A-201ENST00000372396 TSR2Q969E8 191 aaKnown RBP12.41□□□□□ -0.42
KDM4A-201ENST00000372396 SLKQ9H2G2 1235 aaPredicted RBP12.41□□□□□ -0.42
KDM4A-201ENST00000372396 FAM161AQ3B820 660 aa12.4□□□□□ -0.42
KDM4A-201ENST00000372396 RAPGEF4Q8WZA2 1011 aa12.4□□□□□ -0.42
KDM4A-201ENST00000372396 PPRC1Q5VV67 1664 aaKnown RBP12.4□□□□□ -0.42
KDM4A-201ENST00000372396 MRE11P49959 708 aa12.4□□□□□ -0.42
KDM4A-201ENST00000372396 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
KDM4A-201ENST00000372396 TAF3Q5VWG9 929 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 ABCA6Q8N139 1617 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 PTMSP20962 102 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 TWISTNBQ3B726 338 aaPredicted RBP12.39□□□□□ -0.43
KDM4A-201ENST00000372396 CCDC27Q2M243 656 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 IL16Q14005 1332 aa12.39□□□□□ -0.43
KDM4A-201ENST00000372396 NLRP1Q9C000 1473 aa12.38□□□□□ -0.43
KDM4A-201ENST00000372396 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
KDM4A-201ENST00000372396 BCORL1Q5H9F3 1711 aa12.38□□□□□ -0.43
KDM4A-201ENST00000372396 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
KDM4A-201ENST00000372396 PRDM4Q9UKN5 801 aa12.37□□□□□ -0.43
KDM4A-201ENST00000372396 BLMP54132 1417 aaPredicted RBP12.37□□□□□ -0.43
KDM4A-201ENST00000372396 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
KDM4A-201ENST00000372396 IFT57Q9NWB7 429 aa12.37□□□□□ -0.43
KDM4A-201ENST00000372396 AGLP35573 1532 aa12.37□□□□□ -0.43
KDM4A-201ENST00000372396 ZC3H13Q5T200 1668 aaKnown RBP12.36□□□□□ -0.43
KDM4A-201ENST00000372396 EVA1CP58658 441 aa12.36□□□□□ -0.43
KDM4A-201ENST00000372396 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
KDM4A-201ENST00000372396 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
KDM4A-201ENST00000372396 SETBP1Q9Y6X0 1596 aa12.36□□□□□ -0.43
KDM4A-201ENST00000372396 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
KDM4A-201ENST00000372396 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 DEPDC5O75140 1603 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 RARSP54136 660 aaKnown RBP12.35□□□□□ -0.43
KDM4A-201ENST00000372396 IRX3P78415 501 aaPredicted RBP12.35□□□□□ -0.43
KDM4A-201ENST00000372396 VWDEQ8N2E2 1590 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 APBB1O00213 710 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 PPP4R3BQ5MIZ7 849 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 ALDH1L2Q3SY69 923 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 CCDC30Q5VVM6 783 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
KDM4A-201ENST00000372396 NOB1Q9ULX3 412 aaKnown RBP12.35□□□□□ -0.43
KDM4A-201ENST00000372396 DIP2BQ9P265 1576 aa12.34□□□□□ -0.43
KDM4A-201ENST00000372396 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
KDM4A-201ENST00000372396 MAPK8IP2Q13387 824 aaPredicted RBP12.34□□□□□ -0.43
KDM4A-201ENST00000372396 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
KDM4A-201ENST00000372396 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
KDM4A-201ENST00000372396 NEURL4Q96JN8 1562 aa12.34□□□□□ -0.43
KDM4A-201ENST00000372396 ZMYM4Q5VZL5 1548 aa12.33□□□□□ -0.43
KDM4A-201ENST00000372396 MCCP23508 829 aa12.33□□□□□ -0.43
KDM4A-201ENST00000372396 ZNF771Q7L3S4 317 aaPredicted RBP12.33□□□□□ -0.43
KDM4A-201ENST00000372396 A2ML1A8K2U0 1454 aa12.33□□□□□ -0.44
KDM4A-201ENST00000372396 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
KDM4A-201ENST00000372396 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
KDM4A-201ENST00000372396 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
KDM4A-201ENST00000372396 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
KDM4A-201ENST00000372396 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
KDM4A-201ENST00000372396 KCNA6P17658 529 aa12.32□□□□□ -0.44
KDM4A-201ENST00000372396 LTKP29376 864 aa12.32□□□□□ -0.44
KDM4A-201ENST00000372396 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
KDM4A-201ENST00000372396 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
KDM4A-201ENST00000372396 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
KDM4A-201ENST00000372396 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
KDM4A-201ENST00000372396 XRCC6P12956 609 aaKnown RBP eCLIP12.31□□□□□ -0.44
KDM4A-201ENST00000372396 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
KDM4A-201ENST00000372396 ZNF530Q6P9A1 599 aaPredicted RBP12.31□□□□□ -0.44
KDM4A-201ENST00000372396 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
KDM4A-201ENST00000372396 METP08581 1390 aa12.31□□□□□ -0.44
KDM4A-201ENST00000372396 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 PLEKHG3A1L390 1219 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 ATP7BP35670 1465 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 FOXO3O43524 673 aa12.3□□□□□ -0.44
KDM4A-201ENST00000372396 MFAP1P55081 439 aaKnown RBP12.29□□□□□ -0.44
KDM4A-201ENST00000372396 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 UQCRHLA0A096LP55 91 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 UQCRHP07919 91 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
KDM4A-201ENST00000372396 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
KDM4A-201ENST00000372396 KIF20AO95235 890 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 XPCQ01831 940 aaPredicted RBP12.29□□□□□ -0.44
KDM4A-201ENST00000372396 ARHGEF40Q8TER5 1519 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 SSH1Q8WYL5 1049 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 NECTIN2Q92692 538 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 SPG7Q9UQ90 795 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 FLT4P35916 1363 aa12.29□□□□□ -0.44
KDM4A-201ENST00000372396 GNAI3P08754 354 aa12.28□□□□□ -0.44
KDM4A-201ENST00000372396 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
KDM4A-201ENST00000372396 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
KDM4A-201ENST00000372396 CGNQ9P2M7 1197 aaKnown RBP12.28□□□□□ -0.44
KDM4A-201ENST00000372396 AMOTQ4VCS5 1084 aa12.28□□□□□ -0.44
KDM4A-201ENST00000372396 CCDC9Q9Y3X0 531 aaKnown RBP12.28□□□□□ -0.44
KDM4A-201ENST00000372396 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.44
KDM4A-201ENST00000372396 UTP14CQ5TAP6 766 aaKnown RBP12.27□□□□□ -0.44
KDM4A-201ENST00000372396 C20orf194Q5TEA3 1177 aa12.27□□□□□ -0.44
KDM4A-201ENST00000372396 AEBP1Q8IUX7 1158 aa12.27□□□□□ -0.44
KDM4A-201ENST00000372396 GCC1Q96CN9 775 aa12.27□□□□□ -0.44
KDM4A-201ENST00000372396 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.44
KDM4A-201ENST00000372396 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms