RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PDE3BQ13370 1112 aa14.37□□□□□ -0.11
COL5A1-202ENST00000371820 CRB1P82279 1406 aa14.37□□□□□ -0.11
COL5A1-202ENST00000371820 CPSF1Q10570 1443 aaKnown RBP14.37□□□□□ -0.11
COL5A1-202ENST00000371820 MON2Q7Z3U7 1717 aa14.37□□□□□ -0.11
COL5A1-202ENST00000371820 COL18A1P39060 1754 aa14.37□□□□□ -0.11
COL5A1-202ENST00000371820 KTN1Q86UP2 1357 aaKnown RBP14.36□□□□□ -0.11
COL5A1-202ENST00000371820 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
COL5A1-202ENST00000371820 NUP188Q5SRE5 1749 aa14.36□□□□□ -0.11
COL5A1-202ENST00000371820 R3HDM1Q15032 1099 aaKnown RBP14.36□□□□□ -0.11
COL5A1-202ENST00000371820 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-202ENST00000371820 LRRC37A3O60309 1634 aa14.36□□□□□ -0.11
COL5A1-202ENST00000371820 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
COL5A1-202ENST00000371820 PEAK1Q9H792 1746 aa14.35□□□□□ -0.11
COL5A1-202ENST00000371820 APBA3O96018 575 aa14.35□□□□□ -0.11
COL5A1-202ENST00000371820 WNK3Q9BYP7 1800 aa14.35□□□□□ -0.11
COL5A1-202ENST00000371820 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
COL5A1-202ENST00000371820 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
COL5A1-202ENST00000371820 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
COL5A1-202ENST00000371820 USP47Q96K76 1375 aa14.34□□□□□ -0.11
COL5A1-202ENST00000371820 ST20-MTHFSA0A0A6YYL1 179 aa14.33□□□□□ -0.12
COL5A1-202ENST00000371820 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 TESK2Q96S53 571 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 RGPD3A6NKT7 1758 aaPredicted RBP14.32□□□□□ -0.12
COL5A1-202ENST00000371820 RGPD4Q7Z3J3 1758 aa14.32□□□□□ -0.12
COL5A1-202ENST00000371820 EDC4Q6P2E9 1401 aaKnown RBP14.32□□□□□ -0.12
COL5A1-202ENST00000371820 NFAT5O94916 1531 aa14.31□□□□□ -0.12
COL5A1-202ENST00000371820 TMF1P82094 1093 aa14.31□□□□□ -0.12
COL5A1-202ENST00000371820 CDCA8Q53HL2 280 aa14.31□□□□□ -0.12
COL5A1-202ENST00000371820 USP54Q70EL1 1684 aa14.3□□□□□ -0.12
COL5A1-202ENST00000371820 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-202ENST00000371820 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
COL5A1-202ENST00000371820 ABCC6O95255 1503 aa14.3□□□□□ -0.12
COL5A1-202ENST00000371820 SBF2Q86WG5 1849 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 ARHGEF25Q86VW2 580 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 SLC12A5Q9H2X9 1139 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 AXIN2Q9Y2T1 843 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 USP31Q70CQ4 1352 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 CD163L1Q9NR16 1453 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 RGPD5Q99666 1765 aa14.29□□□□□ -0.12
COL5A1-202ENST00000371820 A0A1W2PP64 1363 aa14.28□□□□□ -0.12
COL5A1-202ENST00000371820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL5A1-202ENST00000371820 DDB1Q16531 1140 aa14.27□□□□□ -0.13
COL5A1-202ENST00000371820 BCL9O00512 1426 aa14.26□□□□□ -0.13
COL5A1-202ENST00000371820 NBPF14Q5TI25 921 aa14.26□□□□□ -0.13
COL5A1-202ENST00000371820 CDCA7Q9BWT1 371 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-202ENST00000371820 ANKRD36BQ8N2N9 1353 aa14.25□□□□□ -0.13
COL5A1-202ENST00000371820 SOX12O15370 315 aa14.25□□□□□ -0.13
COL5A1-202ENST00000371820 NME9Q86XW9 330 aa14.24□□□□□ -0.13
COL5A1-202ENST00000371820 YTHDC1Q96MU7 727 aaKnown RBP14.24□□□□□ -0.13
COL5A1-202ENST00000371820 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
COL5A1-202ENST00000371820 PLSCR1O15162 318 aa14.23□□□□□ -0.13
COL5A1-202ENST00000371820 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
COL5A1-202ENST00000371820 TNS2Q63HR2 1409 aa14.23□□□□□ -0.13
COL5A1-202ENST00000371820 CCDC7Q96M83 1385 aa14.22□□□□□ -0.13
COL5A1-202ENST00000371820 LTN1O94822 1766 aa14.22□□□□□ -0.13
COL5A1-202ENST00000371820 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
COL5A1-202ENST00000371820 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
COL5A1-202ENST00000371820 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-202ENST00000371820 COG3Q96JB2 828 aa14.21□□□□□ -0.13
COL5A1-202ENST00000371820 CASZ1Q86V15 1759 aa14.21□□□□□ -0.13
COL5A1-202ENST00000371820 ERBB3P21860 1342 aa14.19□□□□□ -0.14
COL5A1-202ENST00000371820 EIF4G2P78344 907 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL5A1-202ENST00000371820 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-202ENST00000371820 NHSQ6T4R5 1651 aa14.19□□□□□ -0.14
COL5A1-202ENST00000371820 SPON1Q9HCB6 807 aa14.18□□□□□ -0.14
COL5A1-202ENST00000371820 EXOC5O00471 708 aa14.17□□□□□ -0.14
COL5A1-202ENST00000371820 KCNQ2O43526 872 aa14.17□□□□□ -0.14
COL5A1-202ENST00000371820 PROM2Q8N271 834 aa14.17□□□□□ -0.14
COL5A1-202ENST00000371820 MYOM1P52179 1685 aa14.17□□□□□ -0.14
COL5A1-202ENST00000371820 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
COL5A1-202ENST00000371820 CCER2I3L3R5 266 aa14.16□□□□□ -0.14
COL5A1-202ENST00000371820 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
COL5A1-202ENST00000371820 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
COL5A1-202ENST00000371820 NLRP2Q9NX02 1062 aa14.14□□□□□ -0.15
COL5A1-202ENST00000371820 PPP1R1BQ9UD71 204 aaPredicted RBP14.14□□□□□ -0.15
COL5A1-202ENST00000371820 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 PAPPAQ13219 1627 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 IL2RBP14784 551 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 AMPHP49418 695 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 ANKRD24Q8TF21 1146 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 IP6K1Q92551 441 aa14.13□□□□□ -0.15
COL5A1-202ENST00000371820 FYB1O15117 783 aa14.12□□□□□ -0.15
COL5A1-202ENST00000371820 PDGFDQ9GZP0 370 aaPredicted RBP14.12□□□□□ -0.15
COL5A1-202ENST00000371820 NSD3Q9BZ95 1437 aa14.12□□□□□ -0.15
COL5A1-202ENST00000371820 BTAF1O14981 1849 aa14.11□□□□□ -0.15
COL5A1-202ENST00000371820 HSPA5P11021 654 aaKnown RBP14.11□□□□□ -0.15
COL5A1-202ENST00000371820 POLR3GLQ9BT43 218 aa14.11□□□□□ -0.15
COL5A1-202ENST00000371820 GGNBP2Q9H3C7 697 aa14.11□□□□□ -0.15
COL5A1-202ENST00000371820 STK32BQ9NY57 414 aa14.11□□□□□ -0.15
COL5A1-202ENST00000371820 MAP3K19Q56UN5 1328 aa14.11□□□□□ -0.15
COL5A1-202ENST00000371820 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
COL5A1-202ENST00000371820 SMG6Q86US8 1419 aaKnown RBP14.1□□□□□ -0.15
COL5A1-202ENST00000371820 SLC15A2Q16348 729 aa14.1□□□□□ -0.15
COL5A1-202ENST00000371820 ACSBG1Q96GR2 724 aa14.1□□□□□ -0.15
COL5A1-202ENST00000371820 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
COL5A1-202ENST00000371820 ANP32CO43423 234 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms