RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
LAMP2-202ENST00000371335 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
LAMP2-202ENST00000371335 NOL8Q76FK4 1167 aaKnown RBP10.06□□□□□ -0.8
LAMP2-202ENST00000371335 ITSN1Q15811 1721 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 TNNT1P13805 278 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 CERS3Q8IU89 383 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 TSR2Q969E8 191 aaKnown RBP10.06□□□□□ -0.8
LAMP2-202ENST00000371335 PEAK1Q9H792 1746 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 OSCARQ8IYS5 282 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 CHAMP1Q96JM3 812 aa10.06□□□□□ -0.8
LAMP2-202ENST00000371335 TECPR2O15040 1411 aa10.05□□□□□ -0.8
LAMP2-202ENST00000371335 TUBGCP6Q96RT7 1819 aa10.05□□□□□ -0.8
LAMP2-202ENST00000371335 MCM4P33991 863 aa10.05□□□□□ -0.8
LAMP2-202ENST00000371335 SKIDA1Q1XH10 827 aa10.05□□□□□ -0.8
LAMP2-202ENST00000371335 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
LAMP2-202ENST00000371335 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
LAMP2-202ENST00000371335 U2SURPO15042 1029 aaKnown RBP10.04□□□□□ -0.8
LAMP2-202ENST00000371335 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
LAMP2-202ENST00000371335 RGPD8O14715 1765 aaPredicted RBP10.04□□□□□ -0.8
LAMP2-202ENST00000371335 MTERF4Q7Z6M4 381 aaKnown RBP10.04□□□□□ -0.8
LAMP2-202ENST00000371335 PHF23Q9BUL5 403 aaPredicted RBP10.04□□□□□ -0.8
LAMP2-202ENST00000371335 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
LAMP2-202ENST00000371335 CENPJQ9HC77 1338 aaPredicted RBP10.03□□□□□ -0.8
LAMP2-202ENST00000371335 CLCN1P35523 988 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 KIF2CQ99661 725 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 CHMP5Q9NZZ3 219 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 APBB1O00213 710 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 DDIT3P35638 169 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 SLC12A5Q9H2X9 1139 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 C14orf93Q9H972 538 aaKnown RBP10.03□□□□□ -0.8
LAMP2-202ENST00000371335 LRRC37A3O60309 1634 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 TCP11L2Q8N4U5 519 aa10.03□□□□□ -0.8
LAMP2-202ENST00000371335 FER1L4A9Z1Z3 1794 aa10.02□□□□□ -0.81
LAMP2-202ENST00000371335 GPATCH11Q8N954 259 aa10.02□□□□□ -0.81
LAMP2-202ENST00000371335 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
LAMP2-202ENST00000371335 PHRF1Q9P1Y6 1649 aaKnown RBP10.02□□□□□ -0.81
LAMP2-202ENST00000371335 LRRC7Q96NW7 1537 aa10.01□□□□□ -0.81
LAMP2-202ENST00000371335 SLIT1O75093 1534 aa10.01□□□□□ -0.81
LAMP2-202ENST00000371335 FBLN1P23142 703 aa10.01□□□□□ -0.81
LAMP2-202ENST00000371335 CCDC66A2RUB6 948 aa10□□□□□ -0.81
LAMP2-202ENST00000371335 FAM177BA6PVY3 158 aa10□□□□□ -0.81
LAMP2-202ENST00000371335 GOLGA6L6A8MZA4 724 aa10□□□□□ -0.81
LAMP2-202ENST00000371335 PDE3AQ14432 1141 aa10□□□□□ -0.81
LAMP2-202ENST00000371335 ARHGAP23Q9P227 1491 aa10□□□□□ -0.81
LAMP2-202ENST00000371335 IRX3P78415 501 aaPredicted RBP10□□□□□ -0.81
LAMP2-202ENST00000371335 CAVIN1Q6NZI2 390 aaKnown RBP10□□□□□ -0.81
LAMP2-202ENST00000371335 PUS7Q96PZ0 661 aaKnown RBP9.99□□□□□ -0.81
LAMP2-202ENST00000371335 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
LAMP2-202ENST00000371335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
LAMP2-202ENST00000371335 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
LAMP2-202ENST00000371335 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
LAMP2-202ENST00000371335 PKP1Q13835 747 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 MCTP1Q6DN14 999 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 ZSCAN30Q86W11 494 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 C22orf23Q9BZE7 217 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 CGNL1Q0VF96 1302 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 TMEM132EQ6IEE7 984 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 JARID2Q92833 1246 aaPredicted RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 TRIM27P14373 513 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 CCAR2Q8N163 923 aaKnown RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 KANK1Q14678 1352 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 CHD2O14647 1828 aaKnown RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 ZRSR1Q15695 479 aaKnown RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 PPP4R3BQ5MIZ7 849 aa9.98□□□□□ -0.81
LAMP2-202ENST00000371335 TNPO1Q92973 898 aaKnown RBP9.98□□□□□ -0.81
LAMP2-202ENST00000371335 CAMTA1Q9Y6Y1 1673 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 MTHFSP49914 203 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 NUTM2DQ5VT03 806 aaPredicted RBP9.97□□□□□ -0.81
LAMP2-202ENST00000371335 PNPLA6Q8IY17 1366 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 GOLGA6L4A6NEF3 574 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 ADAMTSL3P82987 1691 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 ATAD2Q6PL18 1390 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 PIK3C2AO00443 1686 aa9.97□□□□□ -0.81
LAMP2-202ENST00000371335 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
LAMP2-202ENST00000371335 CHMP3Q9Y3E7 222 aa9.96□□□□□ -0.81
LAMP2-202ENST00000371335 MAPK8IP3Q9UPT6 1336 aa9.96□□□□□ -0.81
LAMP2-202ENST00000371335 ABCC11Q96J66 1382 aa9.96□□□□□ -0.81
LAMP2-202ENST00000371335 PDCL2Q8N4E4 241 aa9.96□□□□□ -0.82
LAMP2-202ENST00000371335 C1orf115Q9H7X2 142 aa9.96□□□□□ -0.82
LAMP2-202ENST00000371335 KIF3BO15066 747 aa9.96□□□□□ -0.82
LAMP2-202ENST00000371335 SSH1Q8WYL5 1049 aa9.96□□□□□ -0.82
LAMP2-202ENST00000371335 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
LAMP2-202ENST00000371335 NCOA3Q9Y6Q9 1424 aa9.95□□□□□ -0.82
LAMP2-202ENST00000371335 IBSPP21815 317 aaPredicted RBP9.95□□□□□ -0.82
LAMP2-202ENST00000371335 SKOR2Q2VWA4 1001 aaPredicted RBP9.95□□□□□ -0.82
LAMP2-202ENST00000371335 MVPQ14764 893 aaKnown RBP9.95□□□□□ -0.82
LAMP2-202ENST00000371335 TOMM22Q9NS69 142 aa9.95□□□□□ -0.82
LAMP2-202ENST00000371335 RAPGEF3O95398 923 aa9.95□□□□□ -0.82
LAMP2-202ENST00000371335 TRAK1Q9UPV9 953 aa9.95□□□□□ -0.82
LAMP2-202ENST00000371335 DIP2AQ14689 1571 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 EXOSC9Q06265 439 aaKnown RBP9.94□□□□□ -0.82
LAMP2-202ENST00000371335 ADAMTS13Q76LX8 1427 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 TMEM57Q8N5G2 664 aa9.94□□□□□ -0.82
LAMP2-202ENST00000371335 GOLGA6L1Q8N7Z2 621 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms