RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
PRPF38B-203ENST00000370025 FRAT2O75474 233 aaPredicted RBP12.83□□□□□ -0.36
PRPF38B-203ENST00000370025 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
PRPF38B-203ENST00000370025 RIPK4P57078 832 aa12.82□□□□□ -0.36
PRPF38B-203ENST00000370025 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
PRPF38B-203ENST00000370025 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
PRPF38B-203ENST00000370025 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
PRPF38B-203ENST00000370025 USP31Q70CQ4 1352 aa12.81□□□□□ -0.36
PRPF38B-203ENST00000370025 HMOX1P09601 288 aa12.81□□□□□ -0.36
PRPF38B-203ENST00000370025 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 CRBNQ96SW2 442 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 BACH2Q9BYV9 841 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 LRRC7Q96NW7 1537 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 NAP1L5Q96NT1 182 aaPredicted RBP12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 TRIM35Q9UPQ4 493 aa12.8□□□□□ -0.36
PRPF38B-203ENST00000370025 IL16Q14005 1332 aa12.79□□□□□ -0.36
PRPF38B-203ENST00000370025 SOX12O15370 315 aa12.79□□□□□ -0.36
PRPF38B-203ENST00000370025 NLRP6P59044 892 aa12.78□□□□□ -0.36
PRPF38B-203ENST00000370025 BCAR3O75815 825 aa12.78□□□□□ -0.36
PRPF38B-203ENST00000370025 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
PRPF38B-203ENST00000370025 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
PRPF38B-203ENST00000370025 PROSER2Q86WR7 435 aaPredicted RBP12.78□□□□□ -0.36
PRPF38B-203ENST00000370025 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 EIF4A2Q14240 407 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 GLIPR1L2Q4G1C9 344 aa12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
PRPF38B-203ENST00000370025 CT47B1P0C2W7 299 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-203ENST00000370025 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
PRPF38B-203ENST00000370025 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
PRPF38B-203ENST00000370025 AMPHP49418 695 aa12.76□□□□□ -0.37
PRPF38B-203ENST00000370025 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
PRPF38B-203ENST00000370025 PSME1Q06323 249 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 PIK3C2AO00443 1686 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 RARSP54136 660 aaKnown RBP12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 SBNO1A3KN83 1393 aa12.75□□□□□ -0.37
PRPF38B-203ENST00000370025 FLT4P35916 1363 aa12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 RGS3P49796 1198 aa12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 PDE3AQ14432 1141 aa12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 NUTM2GQ5VZR2 741 aa12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 SULT6B1Q6IMI4 303 aa12.74□□□□□ -0.37
PRPF38B-203ENST00000370025 PEAK1Q9H792 1746 aa12.73□□□□□ -0.37
PRPF38B-203ENST00000370025 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
PRPF38B-203ENST00000370025 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
PRPF38B-203ENST00000370025 C19orf44Q9H6X5 657 aa12.72□□□□□ -0.37
PRPF38B-203ENST00000370025 RRAGDQ9NQL2 400 aaPredicted RBP12.72□□□□□ -0.37
PRPF38B-203ENST00000370025 KIF24Q5T7B8 1368 aa12.71□□□□□ -0.37
PRPF38B-203ENST00000370025 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 GNAI1P63096 354 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 ORAI2Q96SN7 254 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
PRPF38B-203ENST00000370025 BCL2L13Q9BXK5 485 aa12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 ATF3P18847 181 aa12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 HSPA2P54652 639 aa12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 HSP90AA2PQ14568 343 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-203ENST00000370025 FOXO3O43524 673 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 DLG5Q8TDM6 1919 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 MS4A1P11836 297 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 HOXC9P31274 260 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 KCNH5Q8NCM2 988 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 SMC4Q9NTJ3 1288 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 RGPD1P0DJD0 1748 aa12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 MARF1Q9Y4F3 1742 aaKnown RBP12.68□□□□□ -0.38
PRPF38B-203ENST00000370025 ZKSCAN2Q63HK3 967 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 PANK1Q8TE04 598 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 ZNF428Q96B54 188 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 EYA1Q99502 592 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 PODXL2Q9NZ53 605 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 NCOA3Q9Y6Q9 1424 aa12.67□□□□□ -0.38
PRPF38B-203ENST00000370025 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 SPRYD3Q8NCJ5 442 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 IGSF1Q8N6C5 1336 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 RTL1A6NKG5 1358 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 C1orf167Q5SNV9 1468 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 AAMPQ13685 434 aa12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 CENPQQ7L2Z9 268 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-203ENST00000370025 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 KRT28Q7Z3Y7 464 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 SSH1Q8WYL5 1049 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 ALDH1L2Q3SY69 923 aa12.65□□□□□ -0.38
PRPF38B-203ENST00000370025 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms