RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
PRDM1-203ENST00000369096 CYP46A1Q9Y6A2 500 aa18.62■□□□□ 0.57
PRDM1-203ENST00000369096 CCDC102AQ96A19 550 aa18.62■□□□□ 0.57
PRDM1-203ENST00000369096 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
PRDM1-203ENST00000369096 KRT85P78386 507 aa18.61■□□□□ 0.57
PRDM1-203ENST00000369096 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
PRDM1-203ENST00000369096 CCDC158Q5M9N0 1113 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 FILIP1Q7Z7B0 1213 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 LRRCC1Q9C099 1032 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 PDZRN3Q9UPQ7 1066 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 SOGA3Q5TF21 947 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 NLRP6P59044 892 aa18.6■□□□□ 0.57
PRDM1-203ENST00000369096 TTC39AQ5SRH9 613 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 C1orf115Q9H7X2 142 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
PRDM1-203ENST00000369096 GBP2P32456 591 aaPredicted RBP18.59■□□□□ 0.57
PRDM1-203ENST00000369096 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 CUL7Q14999 1698 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 CBFA2T2O43439 604 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 NEBLO76041 1014 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 NACAP1Q9BZK3 213 aa18.59■□□□□ 0.57
PRDM1-203ENST00000369096 WDR33Q9C0J8 1336 aaKnown RBP18.58■□□□□ 0.57
PRDM1-203ENST00000369096 IQCEQ6IPM2 695 aa18.58■□□□□ 0.57
PRDM1-203ENST00000369096 ERC1Q8IUD2 1116 aa18.58■□□□□ 0.57
PRDM1-203ENST00000369096 AEBP1Q8IUX7 1158 aa18.58■□□□□ 0.57
PRDM1-203ENST00000369096 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.57
PRDM1-203ENST00000369096 BMP2KQ9NSY1 1161 aaPredicted RBP18.58■□□□□ 0.57
PRDM1-203ENST00000369096 GNL3LQ9NVN8 582 aaKnown RBP18.58■□□□□ 0.57
PRDM1-203ENST00000369096 LARP1BQ659C4 914 aaKnown RBP18.58■□□□□ 0.56
PRDM1-203ENST00000369096 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.58■□□□□ 0.56
PRDM1-203ENST00000369096 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
PRDM1-203ENST00000369096 ERICH4A6NGS2 130 aa18.57■□□□□ 0.56
PRDM1-203ENST00000369096 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
PRDM1-203ENST00000369096 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
PRDM1-203ENST00000369096 ATF3P18847 181 aa18.57■□□□□ 0.56
PRDM1-203ENST00000369096 ANKRD1Q15327 319 aa18.57■□□□□ 0.56
PRDM1-203ENST00000369096 KIF6Q6ZMV9 814 aa18.57■□□□□ 0.56
PRDM1-203ENST00000369096 UQCRHLA0A096LP55 91 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 UQCRHP07919 91 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 SSR1P43307 286 aaKnown RBP18.56■□□□□ 0.56
PRDM1-203ENST00000369096 TAF4BQ92750 862 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 CEP57L1Q8IYX8 460 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 TCP11L2Q8N4U5 519 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
PRDM1-203ENST00000369096 IL27Q8NEV9 243 aa18.56■□□□□ 0.56
PRDM1-203ENST00000369096 GNAI2P04899 355 aa18.55■□□□□ 0.56
PRDM1-203ENST00000369096 ARHGAP29Q52LW3 1261 aa18.55■□□□□ 0.56
PRDM1-203ENST00000369096 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRDM1-203ENST00000369096 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
PRDM1-203ENST00000369096 EIF5P55010 431 aaKnown RBP18.55■□□□□ 0.56
PRDM1-203ENST00000369096 UBXN4Q92575 508 aa18.55■□□□□ 0.56
PRDM1-203ENST00000369096 GOLGA6L10A0A0M3HER8 536 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 DESP17661 470 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 MTHFSP49914 203 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 EXOSC9Q06265 439 aaKnown RBP18.54■□□□□ 0.56
PRDM1-203ENST00000369096 EPB41L2O43491 1005 aaKnown RBP18.54■□□□□ 0.56
PRDM1-203ENST00000369096 GCC1Q96CN9 775 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 GRPEL1Q9HAV7 217 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
PRDM1-203ENST00000369096 UPF3BQ9BZI7 483 aaKnown RBP18.53■□□□□ 0.56
PRDM1-203ENST00000369096 SIL1Q9H173 461 aa18.53■□□□□ 0.56
PRDM1-203ENST00000369096 KIAA1328Q86T90 577 aa18.53■□□□□ 0.56
PRDM1-203ENST00000369096 TWISTNBQ3B726 338 aaPredicted RBP18.53■□□□□ 0.56
PRDM1-203ENST00000369096 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
PRDM1-203ENST00000369096 SPATA32Q96LK8 384 aa18.53■□□□□ 0.56
PRDM1-203ENST00000369096 CRACR2AQ9BSW2 395 aa18.53■□□□□ 0.56
PRDM1-203ENST00000369096 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
PRDM1-203ENST00000369096 PPP1R1BQ9UD71 204 aaPredicted RBP18.52■□□□□ 0.56
PRDM1-203ENST00000369096 CCDC57Q2TAC2 916 aa18.52■□□□□ 0.55
PRDM1-203ENST00000369096 ZNF428Q96B54 188 aa18.52■□□□□ 0.55
PRDM1-203ENST00000369096 JAKMIP3Q5VZ66 844 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 IBSPP21815 317 aaPredicted RBP18.51■□□□□ 0.55
PRDM1-203ENST00000369096 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 NUP62CLQ9H1M0 184 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 CDCA7LQ96GN5 454 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 CCDC113Q9H0I3 377 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 K7ELQ4 463 aaPredicted RBP18.51■□□□□ 0.55
PRDM1-203ENST00000369096 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
PRDM1-203ENST00000369096 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRDM1-203ENST00000369096 MAP2K1Q02750 393 aaPredicted RBP18.5■□□□□ 0.55
PRDM1-203ENST00000369096 JPH4Q96JJ6 628 aa18.5■□□□□ 0.55
PRDM1-203ENST00000369096 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRDM1-203ENST00000369096 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
PRDM1-203ENST00000369096 MAP4K4O95819 1239 aaPredicted RBP18.5■□□□□ 0.55
PRDM1-203ENST00000369096 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
PRDM1-203ENST00000369096 CCDC91Q7Z6B0 441 aa18.5■□□□□ 0.55
PRDM1-203ENST00000369096 CFAP100Q494V2 611 aa18.49■□□□□ 0.55
PRDM1-203ENST00000369096 NF2P35240 595 aa18.49■□□□□ 0.55
PRDM1-203ENST00000369096 CFAP45Q9UL16 551 aa18.49■□□□□ 0.55
PRDM1-203ENST00000369096 SLC4A2P04920 1241 aa18.49■□□□□ 0.55
PRDM1-203ENST00000369096 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
PRDM1-203ENST00000369096 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
PRDM1-203ENST00000369096 CETN2P41208 172 aa18.49■□□□□ 0.55
PRDM1-203ENST00000369096 CDKL5O76039 1030 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 TMCO3Q6UWJ1 677 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 GIMAP7Q8NHV1 300 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms