RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 HSP90AB2PQ58FF8 381 aa32.08■■■□□ 2.73
CLK2-203ENST00000368361 RBM33Q96EV2 1170 aaKnown RBP32.08■■■□□ 2.73
CLK2-203ENST00000368361 DLG5Q8TDM6 1919 aa32.07■■■□□ 2.72
CLK2-203ENST00000368361 THUMPD2Q9BTF0 503 aaKnown RBP32.07■■■□□ 2.72
CLK2-203ENST00000368361 AEBP1Q8IUX7 1158 aa32.05■■■□□ 2.72
CLK2-203ENST00000368361 CLUAP1Q96AJ1 413 aa32.05■■■□□ 2.72
CLK2-203ENST00000368361 SMC4Q9NTJ3 1288 aa32.04■■■□□ 2.72
CLK2-203ENST00000368361 MAP3K19Q56UN5 1328 aa32.04■■■□□ 2.72
CLK2-203ENST00000368361 NPHP4O75161 1426 aaPredicted RBP32.04■■■□□ 2.72
CLK2-203ENST00000368361 SULT6B1Q6IMI4 303 aa32.04■■■□□ 2.72
CLK2-203ENST00000368361 LAS1LQ9Y4W2 734 aaKnown RBP32.04■■■□□ 2.72
CLK2-203ENST00000368361 MS4A1P11836 297 aa32.03■■■□□ 2.72
CLK2-203ENST00000368361 SSH1Q8WYL5 1049 aa32.03■■■□□ 2.72
CLK2-203ENST00000368361 RGPD1P0DJD0 1748 aa32.02■■■□□ 2.72
CLK2-203ENST00000368361 ZKSCAN2Q63HK3 967 aa32.01■■■□□ 2.72
CLK2-203ENST00000368361 CALD1Q05682 793 aaKnown RBP32■■■□□ 2.71
CLK2-203ENST00000368361 NLRP6P59044 892 aa31.99■■■□□ 2.71
CLK2-203ENST00000368361 LMOD3Q0VAK6 560 aa31.98■■■□□ 2.71
CLK2-203ENST00000368361 SBNO1A3KN83 1393 aa31.98■■■□□ 2.71
CLK2-203ENST00000368361 IGHDP01880 384 aa31.98■■■□□ 2.71
CLK2-203ENST00000368361 FLT4P35916 1363 aa31.97■■■□□ 2.71
CLK2-203ENST00000368361 MARF1Q9Y4F3 1742 aaKnown RBP31.97■■■□□ 2.71
CLK2-203ENST00000368361 MSH5O43196 834 aa31.97■■■□□ 2.71
CLK2-203ENST00000368361 FAM83GA6ND36 823 aa31.97■■■□□ 2.71
CLK2-203ENST00000368361 IFT57Q9NWB7 429 aa31.97■■■□□ 2.71
CLK2-203ENST00000368361 ADGRL3Q9HAR2 1447 aa31.96■■■□□ 2.71
CLK2-203ENST00000368361 PDE4AP27815 886 aa31.95■■■□□ 2.71
CLK2-203ENST00000368361 GNAI1P63096 354 aa31.95■■■□□ 2.71
CLK2-203ENST00000368361 NUTM2GQ5VZR2 741 aa31.95■■■□□ 2.71
CLK2-203ENST00000368361 PHF8Q9UPP1 1060 aa31.95■■■□□ 2.71
CLK2-203ENST00000368361 DZIP1LQ8IYY4 767 aaKnown RBP31.95■■■□□ 2.7
CLK2-203ENST00000368361 ZNF853P0CG23 659 aa31.94■■■□□ 2.7
CLK2-203ENST00000368361 FTSJ3Q8IY81 847 aaKnown RBP31.94■■■□□ 2.7
CLK2-203ENST00000368361 TRIM27P14373 513 aa31.94■■■□□ 2.7
CLK2-203ENST00000368361 AAMPQ13685 434 aa31.94■■■□□ 2.7
CLK2-203ENST00000368361 PAK3O75914 559 aaPredicted RBP31.93■■■□□ 2.7
CLK2-203ENST00000368361 MVPQ14764 893 aaKnown RBP31.93■■■□□ 2.7
CLK2-203ENST00000368361 ABTB2Q8N961 1025 aa31.93■■■□□ 2.7
CLK2-203ENST00000368361 DCTN1Q14203 1278 aa31.92■■■□□ 2.7
CLK2-203ENST00000368361 MBIPQ9NS73 344 aa31.92■■■□□ 2.7
CLK2-203ENST00000368361 NOB1Q9ULX3 412 aaKnown RBP31.92■■■□□ 2.7
CLK2-203ENST00000368361 USP54Q70EL1 1684 aa31.92■■■□□ 2.7
CLK2-203ENST00000368361 AMPHP49418 695 aa31.92■■■□□ 2.7
CLK2-203ENST00000368361 BACH2Q9BYV9 841 aa31.92■■■□□ 2.7
CLK2-203ENST00000368361 ALDH1L2Q3SY69 923 aa31.91■■■□□ 2.7
CLK2-203ENST00000368361 CFAP44Q96MT7 982 aa31.91■■■□□ 2.7
CLK2-203ENST00000368361 ARHGEF10O15013 1369 aa31.9■■■□□ 2.7
CLK2-203ENST00000368361 ATF7IPQ6VMQ6 1270 aa31.9■■■□□ 2.7
CLK2-203ENST00000368361 PCDHB15Q9Y5E8 787 aa31.88■■■□□ 2.69
CLK2-203ENST00000368361 KIF16BQ96L93 1317 aa31.88■■■□□ 2.69
CLK2-203ENST00000368361 TSPYL6Q8N831 410 aa31.88■■■□□ 2.69
CLK2-203ENST00000368361 ZNF428Q96B54 188 aa31.87■■■□□ 2.69
CLK2-203ENST00000368361 VAMP4O75379 141 aa31.87■■■□□ 2.69
CLK2-203ENST00000368361 ESCO1Q5FWF5 840 aa31.86■■■□□ 2.69
CLK2-203ENST00000368361 C14orf37Q86TY3 774 aa31.86■■■□□ 2.69
CLK2-203ENST00000368361 NWD1Q149M9 1564 aa31.85■■■□□ 2.69
CLK2-203ENST00000368361 RGS3P49796 1198 aa31.83■■■□□ 2.69
CLK2-203ENST00000368361 EYA1Q99502 592 aa31.83■■■□□ 2.69
CLK2-203ENST00000368361 KDRP35968 1356 aa31.83■■■□□ 2.69
CLK2-203ENST00000368361 IGSF1Q8N6C5 1336 aa31.83■■■□□ 2.69
CLK2-203ENST00000368361 HOXC9P31274 260 aa31.83■■■□□ 2.69
CLK2-203ENST00000368361 ELL2O00472 640 aaPredicted RBP31.82■■■□□ 2.68
CLK2-203ENST00000368361 IPO8O15397 1037 aaKnown RBP31.82■■■□□ 2.68
CLK2-203ENST00000368361 KIF24Q5T7B8 1368 aa31.82■■■□□ 2.68
CLK2-203ENST00000368361 BRPF1P55201 1214 aaPredicted RBP31.81■■■□□ 2.68
CLK2-203ENST00000368361 ITPRIPQ8IWB1 547 aa31.81■■■□□ 2.68
CLK2-203ENST00000368361 MCM10Q7L590 875 aa31.8■■■□□ 2.68
CLK2-203ENST00000368361 TWISTNBQ3B726 338 aaPredicted RBP31.8■■■□□ 2.68
CLK2-203ENST00000368361 C8orf58Q8NAV2 365 aa31.8■■■□□ 2.68
CLK2-203ENST00000368361 PSME1Q06323 249 aa31.79■■■□□ 2.68
CLK2-203ENST00000368361 ANP32AP39687 249 aaKnown RBP31.78■■■□□ 2.68
CLK2-203ENST00000368361 TMEM57Q8N5G2 664 aa31.78■■■□□ 2.68
CLK2-203ENST00000368361 DDX19BQ9UMR2 479 aa31.78■■■□□ 2.68
CLK2-203ENST00000368361 MRPL50Q8N5N7 158 aaKnown RBP31.77■■■□□ 2.68
CLK2-203ENST00000368361 MTHFSDQ2M296 383 aaKnown RBP31.77■■■□□ 2.68
CLK2-203ENST00000368361 ORAI2Q96SN7 254 aa31.76■■■□□ 2.67
CLK2-203ENST00000368361 FOXO3O43524 673 aa31.75■■■□□ 2.67
CLK2-203ENST00000368361 LTN1O94822 1766 aa31.75■■■□□ 2.67
CLK2-203ENST00000368361 PROSER2Q86WR7 435 aaPredicted RBP31.74■■■□□ 2.67
CLK2-203ENST00000368361 CHL1O00533 1208 aa31.73■■■□□ 2.67
CLK2-203ENST00000368361 RWDD1Q9H446 243 aaPredicted RBP31.73■■■□□ 2.67
CLK2-203ENST00000368361 NFAT5O94916 1531 aa31.71■■■□□ 2.67
CLK2-203ENST00000368361 NPM2Q86SE8 214 aaKnown RBP31.71■■■□□ 2.67
CLK2-203ENST00000368361 LTV1Q96GA3 475 aaPredicted RBP31.71■■■□□ 2.67
CLK2-203ENST00000368361 RTL1A6NKG5 1358 aa31.71■■■□□ 2.67
CLK2-203ENST00000368361 CRB1P82279 1406 aa31.7■■■□□ 2.67
CLK2-203ENST00000368361 FAM161AQ3B820 660 aa31.7■■■□□ 2.66
CLK2-203ENST00000368361 C8orf34Q49A92 452 aa31.69■■■□□ 2.66
CLK2-203ENST00000368361 ARHGAP45Q92619 1136 aa31.69■■■□□ 2.66
CLK2-203ENST00000368361 XPCQ01831 940 aaPredicted RBP31.68■■■□□ 2.66
CLK2-203ENST00000368361 ZBTB40Q9NUA8 1239 aa31.68■■■□□ 2.66
CLK2-203ENST00000368361 KRT24Q2M2I5 525 aa31.67■■■□□ 2.66
CLK2-203ENST00000368361 GAS2L2Q8NHY3 880 aa31.67■■■□□ 2.66
CLK2-203ENST00000368361 RTF1Q92541 710 aaKnown RBP31.67■■■□□ 2.66
CLK2-203ENST00000368361 IPO9Q96P70 1041 aaKnown RBP31.67■■■□□ 2.66
CLK2-203ENST00000368361 ANP32EQ9BTT0 268 aa31.67■■■□□ 2.66
CLK2-203ENST00000368361 IP6K1Q92551 441 aa31.64■■■□□ 2.66
CLK2-203ENST00000368361 KCNH5Q8NCM2 988 aa31.64■■■□□ 2.66
CLK2-203ENST00000368361 C19orf44Q9H6X5 657 aa31.63■■■□□ 2.65
CLK2-203ENST00000368361 PDZRN3Q9UPQ7 1066 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms