RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 A2MP01023 1474 aa13.02□□□□□ -0.33
PTPRK-205ENST00000368213 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
PTPRK-205ENST00000368213 TPM2P07951 284 aa13.01□□□□□ -0.33
PTPRK-205ENST00000368213 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
PTPRK-205ENST00000368213 PANK1Q8TE04 598 aa13.01□□□□□ -0.33
PTPRK-205ENST00000368213 ATP6V1DQ9Y5K8 247 aa13.01□□□□□ -0.33
PTPRK-205ENST00000368213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.01□□□□□ -0.335e-6■■□□□ 12.8
PTPRK-205ENST00000368213 BRMS1Q9HCU9 246 aa13.01□□□□□ -0.33
PTPRK-205ENST00000368213 ATP10BO94823 1461 aa13.01□□□□□ -0.33
PTPRK-205ENST00000368213 INTS3Q68E01 1043 aaKnown RBP13.01□□□□□ -0.33
PTPRK-205ENST00000368213 TTLL12Q14166 644 aaPredicted RBP13□□□□□ -0.33
PTPRK-205ENST00000368213 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 R3HCC1Q9Y3T6 440 aaKnown RBP13□□□□□ -0.33
PTPRK-205ENST00000368213 RFC4P35249 363 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 NBPF14Q5TI25 921 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 UHRF1BP1Q6BDS2 1440 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 XBP1P17861 261 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
PTPRK-205ENST00000368213 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
PTPRK-205ENST00000368213 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
PTPRK-205ENST00000368213 FOXD4L6Q3SYB3 417 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-205ENST00000368213 FOXD4L3Q6VB84 417 aaPredicted RBP12.99□□□□□ -0.33
PTPRK-205ENST00000368213 NACAP1Q9BZK3 213 aa12.99□□□□□ -0.33
PTPRK-205ENST00000368213 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
PTPRK-205ENST00000368213 RAI14Q9P0K7 980 aa12.99□□□□□ -0.33
PTPRK-205ENST00000368213 ACEP12821 1306 aa12.99□□□□□ -0.33
PTPRK-205ENST00000368213 FOSBP53539 338 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 TMEM132AQ24JP5 1023 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 HSP90AB3PQ58FF7 597 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 GZF1Q9H116 711 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-205ENST00000368213 MIS18AQ9NYP9 233 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 NAIPQ13075 1403 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
PTPRK-205ENST00000368213 MCM10Q7L590 875 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.33
PTPRK-205ENST00000368213 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
PTPRK-205ENST00000368213 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
PTPRK-205ENST00000368213 HIP1O00291 1037 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 DDB1Q16531 1140 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 ZSCAN25Q6NSZ9 544 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
PTPRK-205ENST00000368213 KDM4AO75164 1064 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 FMNL2Q96PY5 1086 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 POLD1P28340 1107 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 WWC2Q6AWC2 1192 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-205ENST00000368213 LRP2BPQ9P2M1 347 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
PTPRK-205ENST00000368213 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.34
PTPRK-205ENST00000368213 ZMYM3Q14202 1370 aa12.96□□□□□ -0.34
PTPRK-205ENST00000368213 CAVIN4Q5BKX8 364 aa12.95□□□□□ -0.34
PTPRK-205ENST00000368213 METTL24Q5JXM2 366 aa12.95□□□□□ -0.34
PTPRK-205ENST00000368213 A0A087WZG4 1122 aa12.95□□□□□ -0.34
PTPRK-205ENST00000368213 PSMA5P28066 241 aa12.95□□□□□ -0.34
PTPRK-205ENST00000368213 AAMPQ13685 434 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 KIF21AQ7Z4S6 1674 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-205ENST00000368213 GPATCH8Q9UKJ3 1502 aaKnown RBP12.94□□□□□ -0.34
PTPRK-205ENST00000368213 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 ST5P78524 1137 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 LARP1Q6PKG0 1096 aaKnown RBP12.94□□□□□ -0.34
PTPRK-205ENST00000368213 MYD88Q99836 296 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
PTPRK-205ENST00000368213 TPM3P06753 285 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 PCMTD1Q96MG8 357 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-205ENST00000368213 C6orf229H3BNL8 230 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
PTPRK-205ENST00000368213 ZCRB1Q8TBF4 217 aaKnown RBP12.93□□□□□ -0.34
PTPRK-205ENST00000368213 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
PTPRK-205ENST00000368213 WDR63Q8IWG1 891 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 ABCC2Q92887 1545 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 VPS37CA5D8V6 355 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-205ENST00000368213 SRGAP3O43295 1099 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 GPTP24298 496 aa12.93□□□□□ -0.34
PTPRK-205ENST00000368213 TTC21BQ7Z4L5 1316 aa12.92□□□□□ -0.34
PTPRK-205ENST00000368213 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
PTPRK-205ENST00000368213 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
PTPRK-205ENST00000368213 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
PTPRK-205ENST00000368213 AACSQ86V21 672 aa12.92□□□□□ -0.34
PTPRK-205ENST00000368213 ADAMTS12P58397 1594 aa12.92□□□□□ -0.34
PTPRK-205ENST00000368213 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-205ENST00000368213 SMARCC1Q92922 1105 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-205ENST00000368213 MPHOSPH10O00566 681 aaKnown RBP12.91□□□□□ -0.34
PTPRK-205ENST00000368213 CDC45O75419 566 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms