RNA–Protein interactions for RNA: ENST00000367589.3

XPR1-201, Transcript of xenotropic and polytropic retrovirus receptor 1, humanhuman

TSL 1 (best) BASIC

Gene XPR1, Length 4,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPR1-201ENST00000367589 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 ATP6V1DQ9Y5K8 247 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 GPATCH3Q96I76 525 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
XPR1-201ENST00000367589 DTNBO60941 627 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 ZMYND15Q9H091 742 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 PRDM10Q9NQV6 1147 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
XPR1-201ENST00000367589 USP19O94966 1318 aa17.18■□□□□ 0.34
XPR1-201ENST00000367589 IFIT2P09913 472 aaKnown RBP17.18■□□□□ 0.34
XPR1-201ENST00000367589 TEFQ10587 303 aa17.18■□□□□ 0.34
XPR1-201ENST00000367589 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
XPR1-201ENST00000367589 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
XPR1-201ENST00000367589 TRMT2AQ8IZ69 625 aaKnown RBP17.18■□□□□ 0.34
XPR1-201ENST00000367589 LRRCC1Q9C099 1032 aa17.18■□□□□ 0.34
XPR1-201ENST00000367589 H3BQV1 296 aa17.17■□□□□ 0.34
XPR1-201ENST00000367589 ZKSCAN1P17029 563 aaPredicted RBP17.17■□□□□ 0.34
XPR1-201ENST00000367589 IFFO2Q5TF58 517 aa17.17■□□□□ 0.34
XPR1-201ENST00000367589 SDSP20132 328 aa17.17■□□□□ 0.34
XPR1-201ENST00000367589 CHAMP1Q96JM3 812 aa17.17■□□□□ 0.34
XPR1-201ENST00000367589 MEIS3Q99687 375 aa17.17■□□□□ 0.34
XPR1-201ENST00000367589 ZSCAN23Q3MJ62 389 aa17.16■□□□□ 0.34
XPR1-201ENST00000367589 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
XPR1-201ENST00000367589 NUP160Q12769 1436 aa17.16■□□□□ 0.34
XPR1-201ENST00000367589 KLHL40Q2TBA0 621 aa17.16■□□□□ 0.34
XPR1-201ENST00000367589 RPAP2Q8IXW5 612 aaPredicted RBP17.16■□□□□ 0.34
XPR1-201ENST00000367589 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
XPR1-201ENST00000367589 NLRP6P59044 892 aa17.16■□□□□ 0.34
XPR1-201ENST00000367589 ZNF830Q96NB3 372 aaPredicted RBP17.16■□□□□ 0.34
XPR1-201ENST00000367589 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 CWC27Q6UX04 472 aaKnown RBP17.15■□□□□ 0.34
XPR1-201ENST00000367589 GAS2L3Q86XJ1 694 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
XPR1-201ENST00000367589 FERMT3Q86UX7 667 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 GNAI3P08754 354 aa17.15■□□□□ 0.34
XPR1-201ENST00000367589 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 BECN2A8MW95 431 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 VAMP4O75379 141 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 STK3Q13188 491 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 NRDCO43847 1150 aa17.14■□□□□ 0.33
XPR1-201ENST00000367589 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
XPR1-201ENST00000367589 TTC22Q5TAA0 569 aa17.13■□□□□ 0.33
XPR1-201ENST00000367589 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
XPR1-201ENST00000367589 AEBP1Q8IUX7 1158 aa17.13■□□□□ 0.33
XPR1-201ENST00000367589 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
XPR1-201ENST00000367589 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 GNL2Q13823 731 aaKnown RBP17.12■□□□□ 0.33
XPR1-201ENST00000367589 HDGFL1Q5TGJ6 251 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
XPR1-201ENST00000367589 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 SNX21Q969T3 373 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 NPHP1O15259 732 aa17.12■□□□□ 0.33
XPR1-201ENST00000367589 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
XPR1-201ENST00000367589 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
XPR1-201ENST00000367589 SLC52A1Q9NWF4 448 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 RPGRIP1LQ68CZ1 1315 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
XPR1-201ENST00000367589 SHANK2Q9UPX8 1470 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
XPR1-201ENST00000367589 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 SLC26A8Q96RN1 970 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
XPR1-201ENST00000367589 MX1P20591 662 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 MCM2P49736 904 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 CSB-PGBD3P0DP91 1061 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 ADGRL1O94910 1474 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 CAMK4Q16566 473 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 SIL1Q9H173 461 aa17.1■□□□□ 0.33
XPR1-201ENST00000367589 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
XPR1-201ENST00000367589 CLASRPQ8N2M8 674 aaKnown RBP17.09■□□□□ 0.33
XPR1-201ENST00000367589 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
XPR1-201ENST00000367589 PKP1Q13835 747 aa17.09■□□□□ 0.33
XPR1-201ENST00000367589 TMX3Q96JJ7 454 aa17.09■□□□□ 0.33
XPR1-201ENST00000367589 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
XPR1-201ENST00000367589 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
XPR1-201ENST00000367589 CNTROBQ8N137 903 aa17.09■□□□□ 0.33
XPR1-201ENST00000367589 WDR7Q9Y4E6 1490 aa17.09■□□□□ 0.33
XPR1-201ENST00000367589 PLA2R1Q13018 1463 aa17.08■□□□□ 0.33
XPR1-201ENST00000367589 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.33
XPR1-201ENST00000367589 GORABQ5T7V8 394 aa17.08■□□□□ 0.33
XPR1-201ENST00000367589 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
XPR1-201ENST00000367589 ZNF771Q7L3S4 317 aaPredicted RBP17.08■□□□□ 0.32
XPR1-201ENST00000367589 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
XPR1-201ENST00000367589 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.32
XPR1-201ENST00000367589 KDM4AO75164 1064 aa17.08■□□□□ 0.32
XPR1-201ENST00000367589 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
XPR1-201ENST00000367589 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
XPR1-201ENST00000367589 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
XPR1-201ENST00000367589 FAM69CQ0P6D2 419 aa17.07■□□□□ 0.32
XPR1-201ENST00000367589 DUOX2Q9NRD8 1548 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms