RNA–Protein interactions for RNA: ENST00000366792.3

PARP1-202, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 3 BASIC

Gene PARP1, Length 553 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-202ENST00000366792 USP35Q9P2H5 1018 aa29.19■■■□□ 2.26
PARP1-202ENST00000366792 COG3Q96JB2 828 aa29.17■■■□□ 2.26
PARP1-202ENST00000366792 AXIN2Q9Y2T1 843 aa29.15■■■□□ 2.26
PARP1-202ENST00000366792 LTN1O94822 1766 aa29.15■■■□□ 2.26
PARP1-202ENST00000366792 RGPD5Q99666 1765 aa29.14■■■□□ 2.26
PARP1-202ENST00000366792 KIF20BQ96Q89 1820 aa29.13■■■□□ 2.25
PARP1-202ENST00000366792 NSD3Q9BZ95 1437 aa29.12■■■□□ 2.25
PARP1-202ENST00000366792 THSD7AQ9UPZ6 1657 aa29.12■■■□□ 2.25
PARP1-202ENST00000366792 ABCC6O95255 1503 aa29.12■■■□□ 2.25
PARP1-202ENST00000366792 GGNBP2Q9H3C7 697 aa29.12■■■□□ 2.25
PARP1-202ENST00000366792 CRB1P82279 1406 aa29.11■■■□□ 2.25
PARP1-202ENST00000366792 FYB1O15117 783 aa29.11■■■□□ 2.25
PARP1-202ENST00000366792 KRT27Q7Z3Y8 459 aa29.11■■■□□ 2.25
PARP1-202ENST00000366792 TCP11L2Q8N4U5 519 aa29.11■■■□□ 2.25
PARP1-202ENST00000366792 CARD14Q9BXL6 1004 aa29.11■■■□□ 2.25
PARP1-202ENST00000366792 TOM1L2Q6ZVM7 507 aa29.1■■■□□ 2.25
PARP1-202ENST00000366792 CSB-PGBD3P0DP91 1061 aa29.09■■■□□ 2.25
PARP1-202ENST00000366792 BARGINQ6ZT62 677 aa29.08■■■□□ 2.25
PARP1-202ENST00000366792 WDR17Q8IZU2 1322 aa29.08■■■□□ 2.25
PARP1-202ENST00000366792 C11orf95C9JLR9 678 aaPredicted RBP29.07■■■□□ 2.24
PARP1-202ENST00000366792 THRAP3Q9Y2W1 955 aaKnown RBP29.06■■■□□ 2.24
PARP1-202ENST00000366792 CGNL1Q0VF96 1302 aa29.02■■■□□ 2.24
PARP1-202ENST00000366792 FBLN1P23142 703 aa29.02■■■□□ 2.24
PARP1-202ENST00000366792 PANK3Q9H999 370 aa29.01■■■□□ 2.23
PARP1-202ENST00000366792 EP400Q96L91 3159 aa29.01■■■□□ 2.23
PARP1-202ENST00000366792 MAP3K19Q56UN5 1328 aa29■■■□□ 2.23
PARP1-202ENST00000366792 ERBB3P21860 1342 aa28.99■■■□□ 2.23
PARP1-202ENST00000366792 KIF7Q2M1P5 1343 aa28.99■■■□□ 2.23
PARP1-202ENST00000366792 AMPHP49418 695 aa28.99■■■□□ 2.23
PARP1-202ENST00000366792 BLMP54132 1417 aaPredicted RBP28.99■■■□□ 2.23
PARP1-202ENST00000366792 FAM182BQ5T319 152 aa28.98■■■□□ 2.23
PARP1-202ENST00000366792 ANKRD24Q8TF21 1146 aa28.98■■■□□ 2.23
PARP1-202ENST00000366792 IP6K1Q92551 441 aa28.98■■■□□ 2.23
PARP1-202ENST00000366792 CARD10Q9BWT7 1032 aa28.98■■■□□ 2.23
PARP1-202ENST00000366792 RRS1Q15050 365 aaKnown RBP28.97■■■□□ 2.23
PARP1-202ENST00000366792 PARP4Q9UKK3 1724 aaKnown RBP28.97■■■□□ 2.23
PARP1-202ENST00000366792 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
PARP1-202ENST00000366792 PDE3BQ13370 1112 aa28.96■■■□□ 2.23
PARP1-202ENST00000366792 CCDC125Q86Z20 511 aa28.96■■■□□ 2.23
PARP1-202ENST00000366792 NLRP2Q9NX02 1062 aa28.96■■■□□ 2.23
PARP1-202ENST00000366792 LTV1Q96GA3 475 aaPredicted RBP28.95■■■□□ 2.22
PARP1-202ENST00000366792 CCDC7Q96M83 1385 aa28.94■■■□□ 2.22
PARP1-202ENST00000366792 HOXC9P31274 260 aa28.94■■■□□ 2.22
PARP1-202ENST00000366792 RTL1A6NKG5 1358 aa28.93■■■□□ 2.22
PARP1-202ENST00000366792 LRRC37A3O60309 1634 aa28.92■■■□□ 2.22
PARP1-202ENST00000366792 SF3B2Q13435 895 aaKnown RBP28.91■■■□□ 2.22
PARP1-202ENST00000366792 ANKRD26Q9UPS8 1709 aa28.91■■■□□ 2.22
PARP1-202ENST00000366792 FAM208AQ9UK61 1670 aaKnown RBP28.9■■■□□ 2.22
PARP1-202ENST00000366792 DDB1Q16531 1140 aa28.9■■■□□ 2.22
PARP1-202ENST00000366792 CDCA7Q9BWT1 371 aaPredicted RBP28.9■■■□□ 2.22
PARP1-202ENST00000366792 FAM196AQ6ZSG2 479 aa28.88■■■□□ 2.21
PARP1-202ENST00000366792 DISP2A7MBM2 1401 aa28.87■■■□□ 2.21
PARP1-202ENST00000366792 PEAK1Q9H792 1746 aa28.86■■■□□ 2.21
PARP1-202ENST00000366792 KNSTRNQ9Y448 316 aa28.86■■■□□ 2.21
PARP1-202ENST00000366792 FLT4P35916 1363 aa28.86■■■□□ 2.21
PARP1-202ENST00000366792 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
PARP1-202ENST00000366792 TNNT2P45379 298 aaPredicted RBP28.84■■■□□ 2.21
PARP1-202ENST00000366792 EMILIN1Q9Y6C2 1016 aa28.84■■■□□ 2.21
PARP1-202ENST00000366792 NSD2O96028 1365 aa28.84■■■□□ 2.21
PARP1-202ENST00000366792 KIF24Q5T7B8 1368 aa28.84■■■□□ 2.21
PARP1-202ENST00000366792 SMG6Q86US8 1419 aaKnown RBP28.84■■■□□ 2.21
PARP1-202ENST00000366792 PPM1GO15355 546 aaPredicted RBP28.83■■■□□ 2.21
PARP1-202ENST00000366792 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
PARP1-202ENST00000366792 MAP2P11137 1827 aaKnown RBP28.81■■■□□ 2.2
PARP1-202ENST00000366792 RGPD2P0DJD1 1756 aa28.81■■■□□ 2.2
PARP1-202ENST00000366792 INSRP06213 1382 aa28.81■■■□□ 2.2
PARP1-202ENST00000366792 IL2RBP14784 551 aa28.81■■■□□ 2.2
PARP1-202ENST00000366792 HSP90AB2PQ58FF8 381 aa28.81■■■□□ 2.2
PARP1-202ENST00000366792 DEFB132Q7Z7B7 95 aa28.81■■■□□ 2.2
PARP1-202ENST00000366792 OVOS2A0A0G2JMS6 1433 aa28.8■■■□□ 2.2
PARP1-202ENST00000366792 EXOC5O00471 708 aa28.8■■■□□ 2.2
PARP1-202ENST00000366792 TRIM37O94972 964 aa28.8■■■□□ 2.2
PARP1-202ENST00000366792 TNS2Q63HR2 1409 aa28.79■■■□□ 2.2
PARP1-202ENST00000366792 TNS1Q9HBL0 1735 aaKnown RBP28.78■■■□□ 2.2
PARP1-202ENST00000366792 BAG6P46379 1132 aa28.78■■■□□ 2.2
PARP1-202ENST00000366792 MORC1Q86VD1 984 aa28.77■■■□□ 2.2
PARP1-202ENST00000366792 MARCH10Q8NA82 808 aaPredicted RBP28.76■■■□□ 2.19
PARP1-202ENST00000366792 POLKQ9UBT6 870 aa28.76■■■□□ 2.19
PARP1-202ENST00000366792 NBPF6Q5VWK0 638 aa28.74■■■□□ 2.19
PARP1-202ENST00000366792 NBPF4Q96M43 638 aa28.74■■■□□ 2.19
PARP1-202ENST00000366792 AMER1Q5JTC6 1135 aaPredicted RBP28.73■■■□□ 2.19
PARP1-202ENST00000366792 USHBP1Q8N6Y0 703 aa28.73■■■□□ 2.19
PARP1-202ENST00000366792 PER1O15534 1290 aaPredicted RBP28.7■■■□□ 2.18
PARP1-202ENST00000366792 EN1Q05925 392 aaPredicted RBP28.7■■■□□ 2.18
PARP1-202ENST00000366792 APBA3O96018 575 aa28.69■■■□□ 2.18
PARP1-202ENST00000366792 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
PARP1-202ENST00000366792 MEGF6O75095 1541 aa28.68■■■□□ 2.18
PARP1-202ENST00000366792 CC2D1BQ5T0F9 858 aaKnown RBP28.67■■■□□ 2.18
PARP1-202ENST00000366792 RAPGEF4Q8WZA2 1011 aa28.66■■■□□ 2.18
PARP1-202ENST00000366792 BCL9O00512 1426 aa28.66■■■□□ 2.18
PARP1-202ENST00000366792 CNGB1Q14028 1251 aaPredicted RBP28.64■■■□□ 2.18
PARP1-202ENST00000366792 DDX54Q8TDD1 881 aaKnown RBP28.64■■■□□ 2.18
PARP1-202ENST00000366792 TATP17735 454 aaPredicted RBP28.62■■■□□ 2.17
PARP1-202ENST00000366792 EZH2Q15910 746 aaKnown RBP28.62■■■□□ 2.17
PARP1-202ENST00000366792 ZCRB1Q8TBF4 217 aaKnown RBP28.62■■■□□ 2.17
PARP1-202ENST00000366792 EIF4A2Q14240 407 aaKnown RBP28.61■■■□□ 2.17
PARP1-202ENST00000366792 BCL11BQ9C0K0 894 aaPredicted RBP28.61■■■□□ 2.17
PARP1-202ENST00000366792 EYA1Q99502 592 aa28.6■■■□□ 2.17
PARP1-202ENST00000366792 PTF1AQ7RTS3 328 aa28.59■■■□□ 2.17
PARP1-202ENST00000366792 CAMKK2Q96RR4 588 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms