RNA–Protein interactions for RNA: ENST00000363690.1

RNU6-288P-201, Transcript of RNA, U6 small nuclear 288, pseudogene, humanhuman

BASIC

Gene RNU6-288P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-288P-201ENST00000363690 ATP5J2-PTCD1G3V325 749 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 SKIP12755 728 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 SRPK2P78362 688 aaKnown RBP5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 ELOAQ14241 798 aaKnown RBP5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 LINC01559Q495D7 138 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 TRIM50Q86XT4 487 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 FOXJ1Q92949 421 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 TRAIPQ9BWF2 469 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 CARD14Q9BXL6 1004 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 PLA2G2EQ9NZK7 142 aa5.79□□□□□ -1.48
RNU6-288P-201ENST00000363690 PATL2C9JE40 543 aaKnown RBP5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 PPEF1O14829 653 aaPredicted RBP5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 CSB-PGBD3P0DP91 1061 aa5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 EML3Q32P44 896 aa5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 TBC1D9Q6ZT07 1266 aa5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 PLPP7Q8NBV4 271 aa5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 CDK15Q96Q40 435 aa5.78□□□□□ -1.48
RNU6-288P-201ENST00000363690 USP17L3A6NCW0 530 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 USP17L4A6NCW7 530 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 USP17L5A8MUK1 530 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 ATP1A2P50993 1020 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 DHX9Q08211 1270 aaKnown RBP5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 USP17L2Q6R6M4 530 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 USP17L1Q7RTZ2 530 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 EHBP1Q8NDI1 1231 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 NOD1Q9Y239 953 aa5.77□□□□□ -1.49
RNU6-288P-201ENST00000363690 FAM196BA6NMK8 535 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 WNT7AO00755 349 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 RFX1P22670 979 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 SLC19A1P41440 591 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 USP4Q13107 963 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 C4orf48Q5BLP8 95 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 PLA2G2CQ5R387 149 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 RC3H1Q5TC82 1133 aaKnown RBP5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 VASH1Q7L8A9 365 aaPredicted RBP5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 KCTD17Q8N5Z5 321 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 DOLKQ9UPQ8 538 aa5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 V9GY48 417 aaPredicted RBP5.76□□□□□ -1.49
RNU6-288P-201ENST00000363690 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 A0A0G2JS52 829 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 SKOR1P84550 965 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 NR5A1Q13285 461 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 KANK4Q5T7N3 995 aaPredicted RBP5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 B4GALNT3Q6L9W6 998 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 LARP1Q6PKG0 1096 aaKnown RBP5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 TRAF7Q6Q0C0 670 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 LIAT1Q6ZQX7 453 aa5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 KCTD15Q96SI1 283 aaPredicted RBP5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 MKRN1Q9UHC7 482 aaKnown RBP5.75□□□□□ -1.49
RNU6-288P-201ENST00000363690 PIK3CDO00329 1044 aa5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 GIGYF1O75420 1035 aaPredicted RBP5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 MYCP01106 439 aaPredicted RBP5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 ZNF598Q86UK7 904 aaKnown RBP5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 LARGE2Q8N3Y3 721 aa5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 ESF1Q9H501 851 aaKnown RBP5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 RBM19Q9Y4C8 960 aaKnown RBP5.74□□□□□ -1.49
RNU6-288P-201ENST00000363690 RGS20O76081 388 aa5.73□□□□□ -1.49
RNU6-288P-201ENST00000363690 NCOA4Q13772 614 aa5.73□□□□□ -1.49
RNU6-288P-201ENST00000363690 SPRYD7Q5W111 196 aa5.73□□□□□ -1.49
RNU6-288P-201ENST00000363690 RETREG2Q8NC44 543 aa5.73□□□□□ -1.49
RNU6-288P-201ENST00000363690 CDCA7Q9BWT1 371 aaPredicted RBP5.73□□□□□ -1.49
RNU6-288P-201ENST00000363690 SIAH2O43255 324 aa5.72□□□□□ -1.49
RNU6-288P-201ENST00000363690 ADH1CP00326 375 aa5.72□□□□□ -1.49
RNU6-288P-201ENST00000363690 RASA1P20936 1047 aa5.72□□□□□ -1.49
RNU6-288P-201ENST00000363690 PCDHB11Q9Y5F2 797 aa5.72□□□□□ -1.49
RNU6-288P-201ENST00000363690 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
RNU6-288P-201ENST00000363690 CCDC85AQ96PX6 553 aaPredicted RBP5.71□□□□□ -1.5
RNU6-288P-201ENST00000363690 DNAAF2Q9NVR5 837 aaKnown RBP5.71□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L15C9J2P7 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L10C9JJH3 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L13C9JLJ4 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L12C9JPN9 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L11C9JVI0 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L21D6R901 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L18D6R9N7 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L22D6RA61 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L17D6RBQ6 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L19D6RCP7 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L20D6RJB6 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 BRD1O95696 1058 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 USP17L24Q0WX57 530 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 PTK7Q13308 1070 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 ARID5BQ14865 1188 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 OXLD1Q5BKU9 147 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 INTS6LQ5JSJ4 861 aaKnown RBP5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 ZNF697Q5TEC3 545 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 CC2D2BQ6DHV5 1058 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 SIX5Q8N196 739 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 SNIP1Q8TAD8 396 aaKnown RBP5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 FAM200AQ8TCP9 573 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 PGPEP1Q9NXJ5 209 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 EMILIN1Q9Y6C2 1016 aa5.7□□□□□ -1.5
RNU6-288P-201ENST00000363690 M0R2N6 131 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 ERVH48-1M5A8F1 160 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 GRM5P41594 1212 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 ERVK-9P63128 1117 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 GTF2IP78347 998 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 MYT1Q01538 1121 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 KCNA1Q09470 495 aa5.69□□□□□ -1.5
RNU6-288P-201ENST00000363690 SWI5Q1ZZU3 235 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms