RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 TDO2P48775 406 aa20.39■□□□□ 0.86
COL4A2-201ENST00000360467 SYCP1Q15431 976 aa20.39■□□□□ 0.86
COL4A2-201ENST00000360467 SRCIN1Q9C0H9 1055 aa20.39■□□□□ 0.85
COL4A2-201ENST00000360467 WAPLQ7Z5K2 1190 aa20.39■□□□□ 0.85
COL4A2-201ENST00000360467 PRPF40AO75400 957 aaKnown RBP20.39■□□□□ 0.85
COL4A2-201ENST00000360467 STK38Q15208 465 aa20.39■□□□□ 0.85
COL4A2-201ENST00000360467 IL1RAPL2Q9NP60 686 aa20.39■□□□□ 0.85
COL4A2-201ENST00000360467 PAXIP1Q6ZW49 1069 aaPredicted RBP20.38■□□□□ 0.85
COL4A2-201ENST00000360467 TANGO6Q9C0B7 1094 aa20.38■□□□□ 0.85
COL4A2-201ENST00000360467 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
COL4A2-201ENST00000360467 HIP1O00291 1037 aa20.38■□□□□ 0.85
COL4A2-201ENST00000360467 MYCNP04198 464 aaPredicted RBP20.38■□□□□ 0.85
COL4A2-201ENST00000360467 LRP2BPQ9P2M1 347 aa20.37■□□□□ 0.85
COL4A2-201ENST00000360467 SSBP05455 408 aaKnown RBP eCLIP20.37■□□□□ 0.85
COL4A2-201ENST00000360467 ZNF692Q9BU19 519 aaPredicted RBP20.37■□□□□ 0.85
COL4A2-201ENST00000360467 KINO60870 393 aaKnown RBP20.37■□□□□ 0.85
COL4A2-201ENST00000360467 CWC27Q6UX04 472 aaKnown RBP20.37■□□□□ 0.85
COL4A2-201ENST00000360467 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
COL4A2-201ENST00000360467 TRIM5Q9C035 493 aa20.37■□□□□ 0.85
COL4A2-201ENST00000360467 CASKIN1Q8WXD9 1431 aa20.37■□□□□ 0.85
COL4A2-201ENST00000360467 SOGA3Q5TF21 947 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 AK7Q96M32 723 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 IDH1O75874 414 aaKnown RBP20.36■□□□□ 0.85
COL4A2-201ENST00000360467 SRGAP3O43295 1099 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
COL4A2-201ENST00000360467 NUTM1Q86Y26 1132 aa20.35■□□□□ 0.85
COL4A2-201ENST00000360467 MPNDQ8N594 471 aa20.35■□□□□ 0.85
COL4A2-201ENST00000360467 ZNF76P36508 570 aa20.34■□□□□ 0.85
COL4A2-201ENST00000360467 CCT4P50991 539 aaKnown RBP20.34■□□□□ 0.85
COL4A2-201ENST00000360467 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
COL4A2-201ENST00000360467 MCM10Q7L590 875 aa20.34■□□□□ 0.85
COL4A2-201ENST00000360467 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
COL4A2-201ENST00000360467 IGHMBP2P38935 993 aaKnown RBP20.34■□□□□ 0.85
COL4A2-201ENST00000360467 DCTN1Q14203 1278 aa20.34■□□□□ 0.85
COL4A2-201ENST00000360467 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
COL4A2-201ENST00000360467 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
COL4A2-201ENST00000360467 CYP46A1Q9Y6A2 500 aa20.33■□□□□ 0.85
COL4A2-201ENST00000360467 ZPR1O75312 459 aa20.33■□□□□ 0.84
COL4A2-201ENST00000360467 ZNF396Q96N95 335 aaPredicted RBP20.33■□□□□ 0.84
COL4A2-201ENST00000360467 PNISRQ8TF01 805 aaKnown RBP20.33■□□□□ 0.84
COL4A2-201ENST00000360467 CCDC173Q0VFZ6 552 aa20.32■□□□□ 0.84
COL4A2-201ENST00000360467 TMOD3Q9NYL9 352 aa20.32■□□□□ 0.84
COL4A2-201ENST00000360467 ANKIB1Q9P2G1 1089 aa20.32■□□□□ 0.84
COL4A2-201ENST00000360467 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
COL4A2-201ENST00000360467 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
COL4A2-201ENST00000360467 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
COL4A2-201ENST00000360467 TRIM22Q8IYM9 498 aa20.31■□□□□ 0.84
COL4A2-201ENST00000360467 TTLL12Q14166 644 aaPredicted RBP20.31■□□□□ 0.84
COL4A2-201ENST00000360467 FILIP1LQ4L180 1135 aa20.31■□□□□ 0.84
COL4A2-201ENST00000360467 ME1P48163 572 aa20.3■□□□□ 0.84
COL4A2-201ENST00000360467 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
COL4A2-201ENST00000360467 METTL24Q5JXM2 366 aa20.3■□□□□ 0.84
COL4A2-201ENST00000360467 MYD88Q99836 296 aa20.3■□□□□ 0.84
COL4A2-201ENST00000360467 SLC4A8Q2Y0W8 1093 aa20.3■□□□□ 0.84
COL4A2-201ENST00000360467 NASPP49321 788 aaPredicted RBP20.29■□□□□ 0.84
COL4A2-201ENST00000360467 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
COL4A2-201ENST00000360467 TEX35Q5T0J7 233 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 UBAC1Q9BSL1 405 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 SERPINC1P01008 464 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 GCC1Q96CN9 775 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 STARD3NLO95772 234 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
COL4A2-201ENST00000360467 TSPY26PQ9H489 355 aa20.28■□□□□ 0.84
COL4A2-201ENST00000360467 ZSCAN25Q6NSZ9 544 aa20.28■□□□□ 0.84
COL4A2-201ENST00000360467 CEP126Q9P2H0 1117 aa20.28■□□□□ 0.84
COL4A2-201ENST00000360467 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
COL4A2-201ENST00000360467 SMARCE1Q969G3 411 aa20.27■□□□□ 0.84
COL4A2-201ENST00000360467 POGZQ7Z3K3 1410 aa20.27■□□□□ 0.84
COL4A2-201ENST00000360467 JAKMIP1Q96N16 626 aaKnown RBP20.27■□□□□ 0.84
COL4A2-201ENST00000360467 AKNAQ7Z591 1439 aa20.27■□□□□ 0.83
COL4A2-201ENST00000360467 MINDY4BA8MYZ0 360 aa20.26■□□□□ 0.83
COL4A2-201ENST00000360467 SMARCA5O60264 1052 aaPredicted RBP20.26■□□□□ 0.83
COL4A2-201ENST00000360467 AIDAQ96BJ3 306 aa20.26■□□□□ 0.83
COL4A2-201ENST00000360467 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
COL4A2-201ENST00000360467 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
COL4A2-201ENST00000360467 DEF6Q9H4E7 631 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 NGLY1Q96IV0 654 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
COL4A2-201ENST00000360467 DDX11Q96FC9 970 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 NSD3Q9BZ95 1437 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
COL4A2-201ENST00000360467 CDR1P51861 262 aa20.24■□□□□ 0.83
COL4A2-201ENST00000360467 TRAK2O60296 914 aa20.24■□□□□ 0.83
COL4A2-201ENST00000360467 ARGLU1Q9NWB6 273 aaPredicted RBP20.24■□□□□ 0.83
COL4A2-201ENST00000360467 TMOD2Q9NZR1 351 aa20.24■□□□□ 0.83
COL4A2-201ENST00000360467 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
COL4A2-201ENST00000360467 CCDC39Q9UFE4 941 aa20.23■□□□□ 0.83
COL4A2-201ENST00000360467 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
COL4A2-201ENST00000360467 EXOC6BQ9Y2D4 811 aa20.23■□□□□ 0.83
COL4A2-201ENST00000360467 DHX37Q8IY37 1157 aaKnown RBP20.23■□□□□ 0.83
COL4A2-201ENST00000360467 ANKRD62A6NC57 917 aa20.23■□□□□ 0.83
COL4A2-201ENST00000360467 FOXO3O43524 673 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 LARP1BQ659C4 914 aaKnown RBP20.22■□□□□ 0.83
COL4A2-201ENST00000360467 SCLT1Q96NL6 688 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 GPTP24298 496 aa20.22■□□□□ 0.83
COL4A2-201ENST00000360467 CHD1LQ86WJ1 897 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms