RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 ABTB2Q8N961 1025 aa26.31■■□□□ 1.8
CBWD3-201ENST00000360171 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.3■■□□□ 1.8
CBWD3-201ENST00000360171 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
CBWD3-201ENST00000360171 CENPQQ7L2Z9 268 aaPredicted RBP26.29■■□□□ 1.8
CBWD3-201ENST00000360171 USP35Q9P2H5 1018 aa26.29■■□□□ 1.8
CBWD3-201ENST00000360171 CADPS2Q86UW7 1296 aa26.29■■□□□ 1.8
CBWD3-201ENST00000360171 NPM2Q86SE8 214 aaKnown RBP26.28■■□□□ 1.8
CBWD3-201ENST00000360171 IL13P35225 146 aa26.27■■□□□ 1.8
CBWD3-201ENST00000360171 TRMT2AQ8IZ69 625 aaKnown RBP26.27■■□□□ 1.8
CBWD3-201ENST00000360171 NGEFQ8N5V2 710 aa26.27■■□□□ 1.8
CBWD3-201ENST00000360171 DDRGK1Q96HY6 314 aa26.27■■□□□ 1.8
CBWD3-201ENST00000360171 MAP3K19Q56UN5 1328 aa26.26■■□□□ 1.79
CBWD3-201ENST00000360171 LTN1O94822 1766 aa26.26■■□□□ 1.79
CBWD3-201ENST00000360171 SLFN5Q08AF3 891 aa26.26■■□□□ 1.79
CBWD3-201ENST00000360171 TCP11L2Q8N4U5 519 aa26.26■■□□□ 1.79
CBWD3-201ENST00000360171 PLEKHF1Q96S99 279 aa26.26■■□□□ 1.79
CBWD3-201ENST00000360171 ALS2Q96Q42 1657 aa26.25■■□□□ 1.79
CBWD3-201ENST00000360171 C20orf194Q5TEA3 1177 aa26.24■■□□□ 1.79
CBWD3-201ENST00000360171 DMRT2Q9Y5R5 561 aa26.24■■□□□ 1.79
CBWD3-201ENST00000360171 RGPD1P0DJD0 1748 aa26.24■■□□□ 1.79
CBWD3-201ENST00000360171 RRP7AQ9Y3A4 280 aaKnown RBP26.23■■□□□ 1.79
CBWD3-201ENST00000360171 NFAT5O94916 1531 aa26.23■■□□□ 1.79
CBWD3-201ENST00000360171 KRT28Q7Z3Y7 464 aa26.22■■□□□ 1.79
CBWD3-201ENST00000360171 SBNO1A3KN83 1393 aa26.22■■□□□ 1.79
CBWD3-201ENST00000360171 DDX17Q92841 729 aaKnown RBP26.21■■□□□ 1.79
CBWD3-201ENST00000360171 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.79
CBWD3-201ENST00000360171 HSP90AB2PQ58FF8 381 aa26.2■■□□□ 1.79
CBWD3-201ENST00000360171 RSPH6AQ9H0K4 717 aa26.2■■□□□ 1.79
CBWD3-201ENST00000360171 FLT4P35916 1363 aa26.19■■□□□ 1.78
CBWD3-201ENST00000360171 NEUROD2Q15784 382 aa26.19■■□□□ 1.78
CBWD3-201ENST00000360171 SLIT3O75094 1523 aa26.18■■□□□ 1.78
CBWD3-201ENST00000360171 HMOX1P09601 288 aa26.18■■□□□ 1.78
CBWD3-201ENST00000360171 FCHSD2O94868 740 aa26.17■■□□□ 1.78
CBWD3-201ENST00000360171 PHF23Q9BUL5 403 aaPredicted RBP26.17■■□□□ 1.78
CBWD3-201ENST00000360171 WWC1Q8IX03 1113 aa26.17■■□□□ 1.78
CBWD3-201ENST00000360171 PXDNQ92626 1479 aa26.16■■□□□ 1.78
CBWD3-201ENST00000360171 PRKAR2BP31323 418 aa26.16■■□□□ 1.78
CBWD3-201ENST00000360171 SPINK5Q9NQ38 1064 aaPredicted RBP26.16■■□□□ 1.78
CBWD3-201ENST00000360171 MAPK8IP3Q9UPT6 1336 aa26.15■■□□□ 1.78
CBWD3-201ENST00000360171 PHRF1Q9P1Y6 1649 aaKnown RBP26.15■■□□□ 1.78
CBWD3-201ENST00000360171 AMPHP49418 695 aa26.14■■□□□ 1.77
CBWD3-201ENST00000360171 BRINP3Q76B58 766 aa26.14■■□□□ 1.77
CBWD3-201ENST00000360171 KIF24Q5T7B8 1368 aa26.14■■□□□ 1.77
CBWD3-201ENST00000360171 E9PSI1 815 aa26.13■■□□□ 1.77
CBWD3-201ENST00000360171 NPHP3Q7Z494 1330 aa26.13■■□□□ 1.77
CBWD3-201ENST00000360171 TMPOP42166 694 aaKnown RBP26.13■■□□□ 1.77
CBWD3-201ENST00000360171 LMOD2Q6P5Q4 547 aa26.13■■□□□ 1.77
CBWD3-201ENST00000360171 PNNQ9H307 717 aaKnown RBP26.13■■□□□ 1.77
CBWD3-201ENST00000360171 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
CBWD3-201ENST00000360171 USP19O94966 1318 aa26.12■■□□□ 1.77
CBWD3-201ENST00000360171 DLG5Q8TDM6 1919 aa26.12■■□□□ 1.77
CBWD3-201ENST00000360171 HOXC9P31274 260 aa26.12■■□□□ 1.77
CBWD3-201ENST00000360171 CCDC27Q2M243 656 aa26.12■■□□□ 1.77
CBWD3-201ENST00000360171 FAM161AQ3B820 660 aa26.12■■□□□ 1.77
CBWD3-201ENST00000360171 NCBP3Q53F19 620 aaKnown RBP26.11■■□□□ 1.77
CBWD3-201ENST00000360171 SLAIN2Q9P270 581 aa26.1■■□□□ 1.77
CBWD3-201ENST00000360171 PHACTR3Q96KR7 559 aa26.1■■□□□ 1.77
CBWD3-201ENST00000360171 LTBP4Q8N2S1 1624 aa26.1■■□□□ 1.77
CBWD3-201ENST00000360171 RTL1A6NKG5 1358 aa26.1■■□□□ 1.77
CBWD3-201ENST00000360171 CRYBG1Q9Y4K1 1723 aa26.1■■□□□ 1.77
CBWD3-201ENST00000360171 VIRMAQ69YN4 1812 aaKnown RBP26.1■■□□□ 1.77
CBWD3-201ENST00000360171 NEFMP07197 916 aa26.09■■□□□ 1.77
CBWD3-201ENST00000360171 AEBP1Q8IUX7 1158 aa26.09■■□□□ 1.77
CBWD3-201ENST00000360171 KCNH5Q8NCM2 988 aa26.09■■□□□ 1.77
CBWD3-201ENST00000360171 PLEKHG5O94827 1062 aa26.09■■□□□ 1.77
CBWD3-201ENST00000360171 SKAP1Q86WV1 359 aa26.09■■□□□ 1.77
CBWD3-201ENST00000360171 TNS3Q68CZ2 1445 aa26.08■■□□□ 1.77
CBWD3-201ENST00000360171 GCP02774 474 aa26.07■■□□□ 1.76
CBWD3-201ENST00000360171 TRIM35Q9UPQ4 493 aa26.07■■□□□ 1.76
CBWD3-201ENST00000360171 ARHGEF10O15013 1369 aa26.06■■□□□ 1.76
CBWD3-201ENST00000360171 C8orf34Q49A92 452 aa26.06■■□□□ 1.76
CBWD3-201ENST00000360171 SULT6B1Q6IMI4 303 aa26.06■■□□□ 1.76
CBWD3-201ENST00000360171 LAS1LQ9Y4W2 734 aaKnown RBP26.06■■□□□ 1.76
CBWD3-201ENST00000360171 NHSL1Q5SYE7 1610 aa26.05■■□□□ 1.76
CBWD3-201ENST00000360171 WDR63Q8IWG1 891 aa26.05■■□□□ 1.76
CBWD3-201ENST00000360171 RGPD2P0DJD1 1756 aa26.04■■□□□ 1.76
CBWD3-201ENST00000360171 RIPK4P57078 832 aa26.04■■□□□ 1.76
CBWD3-201ENST00000360171 RGPD5Q99666 1765 aa26.04■■□□□ 1.76
CBWD3-201ENST00000360171 PDE3AQ14432 1141 aa26.03■■□□□ 1.76
CBWD3-201ENST00000360171 IP6K1Q92551 441 aa26.03■■□□□ 1.76
CBWD3-201ENST00000360171 SPATA31A3Q5VYP0 1347 aa26.03■■□□□ 1.76
CBWD3-201ENST00000360171 IGSF1Q8N6C5 1336 aa26.03■■□□□ 1.76
CBWD3-201ENST00000360171 EYA1Q99502 592 aa26.02■■□□□ 1.76
CBWD3-201ENST00000360171 NFE2L2Q16236 605 aa26.02■■□□□ 1.76
CBWD3-201ENST00000360171 ARHGEF25Q86VW2 580 aa26.02■■□□□ 1.76
CBWD3-201ENST00000360171 ZBTB7CA1YPR0 619 aa26.01■■□□□ 1.75
CBWD3-201ENST00000360171 KDRP35968 1356 aa26.01■■□□□ 1.75
CBWD3-201ENST00000360171 LTV1Q96GA3 475 aaPredicted RBP25.99■■□□□ 1.75
CBWD3-201ENST00000360171 SOS2Q07890 1332 aaPredicted RBP25.99■■□□□ 1.75
CBWD3-201ENST00000360171 BCAR3O75815 825 aa25.97■■□□□ 1.75
CBWD3-201ENST00000360171 CABLES1Q8TDN4 633 aa25.96■■□□□ 1.75
CBWD3-201ENST00000360171 COL18A1P39060 1754 aa25.96■■□□□ 1.75
CBWD3-201ENST00000360171 ABCA3Q99758 1704 aa25.95■■□□□ 1.75
CBWD3-201ENST00000360171 ROBO1Q9Y6N7 1651 aa25.95■■□□□ 1.75
CBWD3-201ENST00000360171 AAMPQ13685 434 aa25.95■■□□□ 1.74
CBWD3-201ENST00000360171 ZC3H6P61129 1189 aaKnown RBP25.93■■□□□ 1.74
CBWD3-201ENST00000360171 DAXXQ9UER7 740 aaPredicted RBP25.93■■□□□ 1.74
CBWD3-201ENST00000360171 CAMTA1Q9Y6Y1 1673 aa25.92■■□□□ 1.74
CBWD3-201ENST00000360171 IL16Q14005 1332 aa25.91■■□□□ 1.74
CBWD3-201ENST00000360171 AXIN2Q9Y2T1 843 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms