RNA–Protein interactions for RNA: ENST00000359333.7

TMEM139-201, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 2,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-201ENST00000359333 CLTCL1P53675 1640 aa18.75■□□□□ 0.59
TMEM139-201ENST00000359333 SYAP1Q96A49 352 aaPredicted RBP18.75■□□□□ 0.59
TMEM139-201ENST00000359333 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
TMEM139-201ENST00000359333 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
TMEM139-201ENST00000359333 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
TMEM139-201ENST00000359333 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
TMEM139-201ENST00000359333 ZGPATQ8N5A5 531 aaKnown RBP18.74■□□□□ 0.59
TMEM139-201ENST00000359333 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
TMEM139-201ENST00000359333 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
TMEM139-201ENST00000359333 TSC1Q92574 1164 aa18.73■□□□□ 0.59
TMEM139-201ENST00000359333 MED14O60244 1454 aa18.72■□□□□ 0.59
TMEM139-201ENST00000359333 ZBTB7CA1YPR0 619 aa18.72■□□□□ 0.59
TMEM139-201ENST00000359333 JARID2Q92833 1246 aaPredicted RBP18.72■□□□□ 0.59
TMEM139-201ENST00000359333 USP32Q8NFA0 1604 aa18.71■□□□□ 0.59
TMEM139-201ENST00000359333 INTS3Q68E01 1043 aaKnown RBP18.71■□□□□ 0.59
TMEM139-201ENST00000359333 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.59
TMEM139-201ENST00000359333 PHF14O94880 888 aa18.71■□□□□ 0.59
TMEM139-201ENST00000359333 UVSSAQ2YD98 709 aa18.71■□□□□ 0.59
TMEM139-201ENST00000359333 BBXQ8WY36 941 aaPredicted RBP18.71■□□□□ 0.59
TMEM139-201ENST00000359333 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
TMEM139-201ENST00000359333 CD109Q6YHK3 1445 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 GSPT1P15170 499 aaKnown RBP18.7■□□□□ 0.58
TMEM139-201ENST00000359333 TAF3Q5VWG9 929 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 FAM184AQ8NB25 1140 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 ZNF428Q96B54 188 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
TMEM139-201ENST00000359333 PDCL2Q8N4E4 241 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 MAP3K4Q9Y6R4 1608 aa18.7■□□□□ 0.58
TMEM139-201ENST00000359333 ABCA6Q8N139 1617 aa18.69■□□□□ 0.58
TMEM139-201ENST00000359333 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
TMEM139-201ENST00000359333 C1orf115Q9H7X2 142 aa18.69■□□□□ 0.58
TMEM139-201ENST00000359333 MYOM2P54296 1465 aa18.69■□□□□ 0.58
TMEM139-201ENST00000359333 CASC1Q6TDU7 716 aa18.69■□□□□ 0.58
TMEM139-201ENST00000359333 PLEKHM2Q8IWE5 1019 aa18.68■□□□□ 0.58
TMEM139-201ENST00000359333 ADGRF5Q8IZF2 1346 aa18.68■□□□□ 0.58
TMEM139-201ENST00000359333 NSD2O96028 1365 aa18.68■□□□□ 0.58
TMEM139-201ENST00000359333 FKBP5Q13451 457 aaPredicted RBP18.68■□□□□ 0.58
TMEM139-201ENST00000359333 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
TMEM139-201ENST00000359333 SPTLC3Q9NUV7 552 aa18.68■□□□□ 0.58
TMEM139-201ENST00000359333 TTC22Q5TAA0 569 aa18.67■□□□□ 0.58
TMEM139-201ENST00000359333 SIRT2Q8IXJ6 389 aa18.67■□□□□ 0.58
TMEM139-201ENST00000359333 ARHGAP45Q92619 1136 aa18.67■□□□□ 0.58
TMEM139-201ENST00000359333 ZNF830Q96NB3 372 aaPredicted RBP18.67■□□□□ 0.58
TMEM139-201ENST00000359333 PPRC1Q5VV67 1664 aaKnown RBP18.67■□□□□ 0.58
TMEM139-201ENST00000359333 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
TMEM139-201ENST00000359333 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
TMEM139-201ENST00000359333 CHAMP1Q96JM3 812 aa18.66■□□□□ 0.58
TMEM139-201ENST00000359333 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
TMEM139-201ENST00000359333 PDE4CQ08493 712 aa18.66■□□□□ 0.58
TMEM139-201ENST00000359333 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
TMEM139-201ENST00000359333 FOXD4L5Q5VV16 416 aaPredicted RBP18.65■□□□□ 0.58
TMEM139-201ENST00000359333 FOXD4L4Q8WXT5 416 aaPredicted RBP18.65■□□□□ 0.58
TMEM139-201ENST00000359333 SPDYE4A6NLX3 237 aa18.64■□□□□ 0.58
TMEM139-201ENST00000359333 PIK3R4Q99570 1358 aa18.64■□□□□ 0.57
TMEM139-201ENST00000359333 REC8O95072 547 aa18.63■□□□□ 0.57
TMEM139-201ENST00000359333 TTC12Q9H892 705 aaPredicted RBP18.63■□□□□ 0.57
TMEM139-201ENST00000359333 FAM177BA6PVY3 158 aa18.63■□□□□ 0.57
TMEM139-201ENST00000359333 BRD1O95696 1058 aa18.63■□□□□ 0.57
TMEM139-201ENST00000359333 GTF2E1P29083 439 aaPredicted RBP18.63■□□□□ 0.57
TMEM139-201ENST00000359333 MPNDQ8N594 471 aa18.63■□□□□ 0.57
TMEM139-201ENST00000359333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.57
TMEM139-201ENST00000359333 ADCY5O95622 1261 aa18.62■□□□□ 0.57
TMEM139-201ENST00000359333 FEZ1Q99689 392 aa18.62■□□□□ 0.57
TMEM139-201ENST00000359333 USP25Q9UHP3 1055 aa18.62■□□□□ 0.57
TMEM139-201ENST00000359333 MRPL50Q8N5N7 158 aaKnown RBP18.61■□□□□ 0.57
TMEM139-201ENST00000359333 TRAK1Q9UPV9 953 aa18.61■□□□□ 0.57
TMEM139-201ENST00000359333 MCM2P49736 904 aa18.61■□□□□ 0.57
TMEM139-201ENST00000359333 C17orf53Q8N3J3 647 aaPredicted RBP18.61■□□□□ 0.57
TMEM139-201ENST00000359333 ANKRD7Q92527 254 aa18.61■□□□□ 0.57
TMEM139-201ENST00000359333 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
TMEM139-201ENST00000359333 DCTPP1Q9H773 170 aa18.6■□□□□ 0.57
TMEM139-201ENST00000359333 TET3O43151 1660 aa18.6■□□□□ 0.57
TMEM139-201ENST00000359333 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
TMEM139-201ENST00000359333 NPM1P06748 294 aaKnown RBP eCLIP18.59■□□□□ 0.57
TMEM139-201ENST00000359333 TMX3Q96JJ7 454 aa18.59■□□□□ 0.57
TMEM139-201ENST00000359333 U2AF2P26368 475 aaKnown RBP eCLIP18.59■□□□□ 0.57
TMEM139-201ENST00000359333 INO80Q9ULG1 1556 aaPredicted RBP18.58■□□□□ 0.57
TMEM139-201ENST00000359333 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
TMEM139-201ENST00000359333 ABCC4O15439 1325 aa18.58■□□□□ 0.57
TMEM139-201ENST00000359333 TPM3P06753 285 aa18.58■□□□□ 0.56
TMEM139-201ENST00000359333 SDSP20132 328 aa18.58■□□□□ 0.56
TMEM139-201ENST00000359333 ZNF771Q7L3S4 317 aaPredicted RBP18.58■□□□□ 0.56
TMEM139-201ENST00000359333 OGFRQ9NZT2 677 aa18.58■□□□□ 0.56
TMEM139-201ENST00000359333 RIOK3O14730 519 aaKnown RBP18.57■□□□□ 0.56
TMEM139-201ENST00000359333 PUS7Q96PZ0 661 aaKnown RBP18.57■□□□□ 0.56
TMEM139-201ENST00000359333 KIF13AQ9H1H9 1805 aa18.57■□□□□ 0.56
TMEM139-201ENST00000359333 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
TMEM139-201ENST00000359333 NEK4P51957 841 aa18.57■□□□□ 0.56
TMEM139-201ENST00000359333 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
TMEM139-201ENST00000359333 ERC2O15083 957 aa18.56■□□□□ 0.56
TMEM139-201ENST00000359333 VAMP4O75379 141 aa18.56■□□□□ 0.56
TMEM139-201ENST00000359333 C16orf71Q8IYS4 520 aaPredicted RBP18.56■□□□□ 0.56
TMEM139-201ENST00000359333 ZC3H13Q5T200 1668 aaKnown RBP18.56■□□□□ 0.56
TMEM139-201ENST00000359333 CTIFO43310 598 aaKnown RBP18.56■□□□□ 0.56
TMEM139-201ENST00000359333 INTS4Q96HW7 963 aaKnown RBP18.56■□□□□ 0.56
TMEM139-201ENST00000359333 TMEM51Q9NW97 253 aa18.56■□□□□ 0.56
TMEM139-201ENST00000359333 NRXN1Q9ULB1 1477 aa18.56■□□□□ 0.56
TMEM139-201ENST00000359333 CUL4AQ13619 759 aa18.55■□□□□ 0.56
TMEM139-201ENST00000359333 CCDC183Q5T5S1 534 aa18.55■□□□□ 0.56
TMEM139-201ENST00000359333 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms