RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 THAP11Q96EK4 314 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 BAZ1BQ9UIG0 1483 aaKnown RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 ABCA10Q8WWZ4 1543 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 POLR1AO95602 1720 aaPredicted RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 FER1L4A9Z1Z3 1794 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 SETD1AO15047 1707 aaKnown RBP2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 PRSS12P56730 875 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 SH3RF1Q7Z6J0 888 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RGL4Q8IZJ4 473 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 BACH2Q9BYV9 841 aa2.98□□□□□ -1.93
SMARCAD1-202ENST00000359052 RICTORQ6R327 1708 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 C2orf72A6NCS6 295 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 PLBD1Q6P4A8 553 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 NKAIN3Q8N8D7 197 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 TTLL13PA6NNM8 815 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 GARTP22102 1010 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 FOXK2Q01167 660 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 ERFEQ4G0M1 354 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 CAPN12Q6ZSI9 719 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 RBCK1Q9BYM8 510 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 FZD6O60353 706 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 TMC4Q7Z404 712 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 PMM1Q92871 262 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 GLI2P10070 1586 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 USP17L8P0C7I0 530 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 CCDC184Q52MB2 194 aa2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 RNPC3Q96LT9 517 aaKnown RBP2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 BMP2KQ9NSY1 1161 aaPredicted RBP2.97□□□□□ -1.93
SMARCAD1-202ENST00000359052 DCAF8L1A6NGE4 600 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 RAPGEF3O95398 923 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 CLCN1P35523 988 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 FAM161AQ3B820 660 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 NAALADL2Q58DX5 795 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 KIAA1024Q9UPX6 916 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCDHGA11Q9Y5H2 935 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 CFAP43Q8NDM7 1665 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 CFAP69A5D8W1 941 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 M0R2N6 131 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 ICMTO60725 284 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 EYA4O95677 639 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 SMC5Q8IY18 1101 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 PCMTD1Q96MG8 357 aaPredicted RBP2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 CACNA2D2Q9NY47 1150 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 HOXB3P14651 431 aaPredicted RBP2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 LAMC1P11047 1609 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 IQGAP2Q13576 1575 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 ACIN1Q9UKV3 1341 aaKnown RBP2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 ZNF710Q8N1W2 664 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 REREQ9P2R6 1566 aa2.96□□□□□ -1.94
SMARCAD1-202ENST00000359052 KIF21BO75037 1637 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 KIF14Q15058 1648 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 WASLO00401 505 aaPredicted RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 LZTS3O60299 673 aaPredicted RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 COL6A1P12109 1028 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 CTDSPL2Q05D32 466 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 TSGA10IPQ3SY00 556 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 TICAM2Q86XR7 235 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 FBXO41Q8TF61 875 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 IRF2BPLQ9H1B7 796 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 KDM5AP29375 1690 aaKnown RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 DEPDC5O75140 1603 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 CCDC88BA6NC98 1476 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 VIRMAQ69YN4 1812 aaKnown RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 U2SURPO15042 1029 aaKnown RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 SWI5Q1ZZU3 235 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 TSKSQ9UJT2 592 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 CAMSAP1Q5T5Y3 1602 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 ABCA9Q8IUA7 1624 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 KDM4AO75164 1064 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 WDR70Q9NW82 654 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 RIMBP3CA6NJZ7 1639 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 RIMBP3BA6NNM3 1639 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 RIMBP3Q9UFD9 1639 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 ANKRD33BA6NCL7 494 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 BHMG1C9JSJ3 638 aaPredicted RBP2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 EXOC5O00471 708 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 C21orf2O43822 256 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 FOSBP53539 338 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 ZNF69Q9UC07 566 aa2.95□□□□□ -1.94
SMARCAD1-202ENST00000359052 IFT172Q9UG01 1749 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 MOXD2PA6NHM9 499 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 TM4SF5O14894 197 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 HOXA2O43364 376 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 SDE2Q6IQ49 451 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 AEBP1Q8IUX7 1158 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 ABCA6Q8N139 1617 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 PHF20L1A8MW92 1017 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L15C9J2P7 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L10C9JJH3 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L13C9JLJ4 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L12C9JPN9 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L11C9JVI0 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L21D6R901 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L18D6R9N7 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L22D6RA61 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L17D6RBQ6 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L19D6RCP7 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L20D6RJB6 530 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 CAPN15O75808 1086 aa2.94□□□□□ -1.94
SMARCAD1-202ENST00000359052 USP17L24Q0WX57 530 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms