RNA–Protein interactions for RNA: ENST00000358011.8

C1orf109-201, Transcript of chromosome 1 open reading frame 109, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C1orf109, Length 2,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-201ENST00000358011 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
C1orf109-201ENST00000358011 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
C1orf109-201ENST00000358011 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
C1orf109-201ENST00000358011 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
C1orf109-201ENST00000358011 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
C1orf109-201ENST00000358011 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
C1orf109-201ENST00000358011 DCCP43146 1447 aa17.24■□□□□ 0.35
C1orf109-201ENST00000358011 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
C1orf109-201ENST00000358011 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
C1orf109-201ENST00000358011 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
C1orf109-201ENST00000358011 PEAK1Q9H792 1746 aa17.23■□□□□ 0.35
C1orf109-201ENST00000358011 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
C1orf109-201ENST00000358011 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
C1orf109-201ENST00000358011 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
C1orf109-201ENST00000358011 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
C1orf109-201ENST00000358011 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
C1orf109-201ENST00000358011 AATKQ6ZMQ8 1374 aa17.22■□□□□ 0.35
C1orf109-201ENST00000358011 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
C1orf109-201ENST00000358011 APAF1O14727 1248 aa17.22■□□□□ 0.35
C1orf109-201ENST00000358011 LTBP4Q8N2S1 1624 aa17.22■□□□□ 0.35
C1orf109-201ENST00000358011 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
C1orf109-201ENST00000358011 DIAPH1O60610 1272 aaKnown RBP17.21■□□□□ 0.35
C1orf109-201ENST00000358011 HSP90AA1P07900 732 aaKnown RBP17.21■□□□□ 0.35
C1orf109-201ENST00000358011 CDCA7LQ96GN5 454 aa17.2■□□□□ 0.34
C1orf109-201ENST00000358011 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
C1orf109-201ENST00000358011 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
C1orf109-201ENST00000358011 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
C1orf109-201ENST00000358011 HMOX1P09601 288 aa17.19■□□□□ 0.34
C1orf109-201ENST00000358011 IL13P35225 146 aa17.19■□□□□ 0.34
C1orf109-201ENST00000358011 NEUROD2Q15784 382 aa17.18■□□□□ 0.34
C1orf109-201ENST00000358011 AEBP2Q6ZN18 517 aaPredicted RBP17.18■□□□□ 0.34
C1orf109-201ENST00000358011 KIF1AQ12756 1690 aa17.18■□□□□ 0.34
C1orf109-201ENST00000358011 ZBTB7CA1YPR0 619 aa17.18■□□□□ 0.34
C1orf109-201ENST00000358011 INSRP06213 1382 aa17.16■□□□□ 0.34
C1orf109-201ENST00000358011 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
C1orf109-201ENST00000358011 PXDNQ92626 1479 aa17.15■□□□□ 0.34
C1orf109-201ENST00000358011 AEBP1Q8IUX7 1158 aa17.15■□□□□ 0.34
C1orf109-201ENST00000358011 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
C1orf109-201ENST00000358011 NAP1L5Q96NT1 182 aaPredicted RBP17.15■□□□□ 0.34
C1orf109-201ENST00000358011 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
C1orf109-201ENST00000358011 CDK12Q9NYV4 1490 aaPredicted RBP17.15■□□□□ 0.34
C1orf109-201ENST00000358011 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
C1orf109-201ENST00000358011 GCP02774 474 aa17.14■□□□□ 0.33
C1orf109-201ENST00000358011 NPHP3Q7Z494 1330 aa17.14■□□□□ 0.33
C1orf109-201ENST00000358011 AMPHP49418 695 aa17.14■□□□□ 0.33
C1orf109-201ENST00000358011 L1TD1Q5T7N2 865 aaKnown RBP17.14■□□□□ 0.33
C1orf109-201ENST00000358011 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
C1orf109-201ENST00000358011 USP54Q70EL1 1684 aa17.13■□□□□ 0.33
C1orf109-201ENST00000358011 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
C1orf109-201ENST00000358011 PNNQ9H307 717 aaKnown RBP17.13■□□□□ 0.33
C1orf109-201ENST00000358011 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
C1orf109-201ENST00000358011 LTN1O94822 1766 aa17.13■□□□□ 0.33
C1orf109-201ENST00000358011 MED1Q15648 1581 aaPredicted RBP17.13■□□□□ 0.33
C1orf109-201ENST00000358011 HOXC9P31274 260 aa17.13■□□□□ 0.33
C1orf109-201ENST00000358011 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
C1orf109-201ENST00000358011 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
C1orf109-201ENST00000358011 NFAT5O94916 1531 aa17.12■□□□□ 0.33
C1orf109-201ENST00000358011 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
C1orf109-201ENST00000358011 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
C1orf109-201ENST00000358011 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
C1orf109-201ENST00000358011 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
C1orf109-201ENST00000358011 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
C1orf109-201ENST00000358011 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
C1orf109-201ENST00000358011 SOS2Q07890 1332 aaPredicted RBP17.09■□□□□ 0.33
C1orf109-201ENST00000358011 CLCN1P35523 988 aa17.09■□□□□ 0.33
C1orf109-201ENST00000358011 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
C1orf109-201ENST00000358011 USP19O94966 1318 aa17.09■□□□□ 0.33
C1orf109-201ENST00000358011 ZNF521Q96K83 1311 aa17.09■□□□□ 0.33
C1orf109-201ENST00000358011 SULT6B1Q6IMI4 303 aa17.09■□□□□ 0.33
C1orf109-201ENST00000358011 FLT4P35916 1363 aa17.08■□□□□ 0.33
C1orf109-201ENST00000358011 ARHGEF25Q86VW2 580 aa17.08■□□□□ 0.33
C1orf109-201ENST00000358011 EYA1Q99502 592 aa17.08■□□□□ 0.32
C1orf109-201ENST00000358011 TNS3Q68CZ2 1445 aa17.08■□□□□ 0.32
C1orf109-201ENST00000358011 RGPD5Q99666 1765 aa17.08■□□□□ 0.32
C1orf109-201ENST00000358011 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
C1orf109-201ENST00000358011 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
C1orf109-201ENST00000358011 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
C1orf109-201ENST00000358011 SLIT3O75094 1523 aa17.07■□□□□ 0.32
C1orf109-201ENST00000358011 PIP4K2BP78356 416 aa17.07■□□□□ 0.32
C1orf109-201ENST00000358011 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 RGPD2P0DJD1 1756 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 FCHSD2O94868 740 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 CHRNA2Q15822 529 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 WWC1Q8IX03 1113 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 KCNH5Q8NCM2 988 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 IP6K1Q92551 441 aa17.06■□□□□ 0.32
C1orf109-201ENST00000358011 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
C1orf109-201ENST00000358011 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
C1orf109-201ENST00000358011 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
C1orf109-201ENST00000358011 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
C1orf109-201ENST00000358011 NHSL1Q5SYE7 1610 aa17.04■□□□□ 0.32
C1orf109-201ENST00000358011 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
C1orf109-201ENST00000358011 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
C1orf109-201ENST00000358011 CRYBG1Q9Y4K1 1723 aa17.03■□□□□ 0.32
C1orf109-201ENST00000358011 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
C1orf109-201ENST00000358011 RIPK4P57078 832 aa17.02■□□□□ 0.32
C1orf109-201ENST00000358011 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
C1orf109-201ENST00000358011 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.31
C1orf109-201ENST00000358011 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.31
C1orf109-201ENST00000358011 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms