RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ZNF692Q9BU19 519 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 IL1RAPL2Q9NP60 686 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 UPF3BQ9BZI7 483 aaKnown RBP18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 ABCC11Q96J66 1382 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 DNAJC2Q99543 621 aaKnown RBP18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 NUP62CLQ9H1M0 184 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 EXOC6BQ9Y2D4 811 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 NOM1Q5C9Z4 860 aaKnown RBP18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 SLC52A1Q9NWF4 448 aa18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 RPGRIP1LQ68CZ1 1315 aa18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 STK3Q13188 491 aa18.56■□□□□ 0.56
TRAPPC11-202ENST00000357207 SRGAP3O43295 1099 aa18.55■□□□□ 0.56
TRAPPC11-202ENST00000357207 DHX8Q14562 1220 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-202ENST00000357207 SPATA32Q96LK8 384 aa18.55■□□□□ 0.56
TRAPPC11-202ENST00000357207 JAKMIP1Q96N16 626 aaKnown RBP18.55■□□□□ 0.56
TRAPPC11-202ENST00000357207 ME1P48163 572 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 PDRG1Q9NUG6 133 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 PDIA4P13667 645 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 BMP2KLQ5H9B9 411 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 RUFY1Q96T51 708 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 CWC15Q9P013 229 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 VPS53Q5VIR6 699 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 CWC27Q6UX04 472 aaKnown RBP18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 TXNDC2Q86VQ3 553 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 PPP6R1Q9UPN7 881 aa18.54■□□□□ 0.56
TRAPPC11-202ENST00000357207 ABCA10Q8WWZ4 1543 aa18.53■□□□□ 0.56
TRAPPC11-202ENST00000357207 AK7Q96M32 723 aa18.53■□□□□ 0.56
TRAPPC11-202ENST00000357207 PDCL3Q9H2J4 239 aa18.53■□□□□ 0.56
TRAPPC11-202ENST00000357207 FILIP1Q7Z7B0 1213 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 PDCL2Q8N4E4 241 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 ATP2B1P20020 1258 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 JMYQ8N9B5 988 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 NLRP2Q9NX02 1062 aa18.52■□□□□ 0.56
TRAPPC11-202ENST00000357207 MAP3K11Q16584 847 aa18.52■□□□□ 0.55
TRAPPC11-202ENST00000357207 C8orf34Q49A92 452 aa18.52■□□□□ 0.55
TRAPPC11-202ENST00000357207 CYB5RLQ6IPT4 315 aa18.52■□□□□ 0.55
TRAPPC11-202ENST00000357207 ERCC4Q92889 916 aaPredicted RBP18.52■□□□□ 0.55
TRAPPC11-202ENST00000357207 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 XRCC6P12956 609 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 RRS1Q15050 365 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 PLEKHO1Q53GL0 409 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 ABTB2Q8N961 1025 aa18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 CFAP45Q9UL16 551 aa18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 SMARCA5O60264 1052 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 KIAA0586Q9BVV6 1533 aa18.51■□□□□ 0.55
TRAPPC11-202ENST00000357207 SERPINC1P01008 464 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 XBP1P17861 261 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 CCDC141Q6ZP82 1450 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 MX1P20591 662 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 CLCN1P35523 988 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 TBC1D9Q6ZT07 1266 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 EVA1CP58658 441 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 TTLL5Q6EMB2 1281 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 AMOTL1Q8IY63 956 aa18.5■□□□□ 0.55
TRAPPC11-202ENST00000357207 FILIP1LQ4L180 1135 aa18.49■□□□□ 0.55
TRAPPC11-202ENST00000357207 FERMT3Q86UX7 667 aa18.49■□□□□ 0.55
TRAPPC11-202ENST00000357207 DISP3Q9P2K9 1392 aa18.49■□□□□ 0.55
TRAPPC11-202ENST00000357207 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
TRAPPC11-202ENST00000357207 CCDC183Q5T5S1 534 aa18.49■□□□□ 0.55
TRAPPC11-202ENST00000357207 RTEL1-TNFRSF6BF6WH68 1400 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 VPS37DQ86XT2 251 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 SIL1Q9H173 461 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 KDM4AO75164 1064 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 CASTP20810 708 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 AACSQ86V21 672 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 G3V3G9 751 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 NAP1L1P55209 391 aaKnown RBP18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 BRMS1Q9HCU9 246 aa18.48■□□□□ 0.55
TRAPPC11-202ENST00000357207 SART3Q15020 963 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-202ENST00000357207 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
TRAPPC11-202ENST00000357207 MCM5P33992 734 aa18.47■□□□□ 0.55
TRAPPC11-202ENST00000357207 NUTM1Q86Y26 1132 aa18.47■□□□□ 0.55
TRAPPC11-202ENST00000357207 NOL10Q9BSC4 688 aaKnown RBP18.47■□□□□ 0.55
TRAPPC11-202ENST00000357207 KRT32Q14532 448 aa18.46■□□□□ 0.55
TRAPPC11-202ENST00000357207 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
TRAPPC11-202ENST00000357207 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
TRAPPC11-202ENST00000357207 SMARCE1Q969G3 411 aa18.46■□□□□ 0.55
TRAPPC11-202ENST00000357207 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
TRAPPC11-202ENST00000357207 HDAC1Q13547 482 aaPredicted RBP18.46■□□□□ 0.54
TRAPPC11-202ENST00000357207 CAGE1Q8TC20 777 aa18.46■□□□□ 0.54
TRAPPC11-202ENST00000357207 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.54
TRAPPC11-202ENST00000357207 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.54
TRAPPC11-202ENST00000357207 IFT140Q96RY7 1462 aa18.45■□□□□ 0.54
TRAPPC11-202ENST00000357207 PANK2Q9BZ23 570 aa18.45■□□□□ 0.54
TRAPPC11-202ENST00000357207 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
TRAPPC11-202ENST00000357207 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms