RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.27
SMC6-201ENST00000351948 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
SMC6-201ENST00000351948 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
SMC6-201ENST00000351948 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
SMC6-201ENST00000351948 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
SMC6-201ENST00000351948 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
SMC6-201ENST00000351948 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
SMC6-201ENST00000351948 C22orf23Q9BZE7 217 aa16.7■□□□□ 0.26
SMC6-201ENST00000351948 KDM4AO75164 1064 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 TAF7Q15545 349 aaPredicted RBP16.69■□□□□ 0.26
SMC6-201ENST00000351948 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 PPIP5K1Q6PFW1 1433 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 UBAP1LF5GYI3 381 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
SMC6-201ENST00000351948 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 TRIM34Q9BYJ4 488 aa16.69■□□□□ 0.26
SMC6-201ENST00000351948 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
SMC6-201ENST00000351948 TRDNQ13061 729 aa16.68■□□□□ 0.26
SMC6-201ENST00000351948 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
SMC6-201ENST00000351948 CREBRFQ8IUR6 639 aa16.68■□□□□ 0.26
SMC6-201ENST00000351948 SPINK5Q9NQ38 1064 aaPredicted RBP16.68■□□□□ 0.26
SMC6-201ENST00000351948 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
SMC6-201ENST00000351948 MSH6P52701 1360 aa16.68■□□□□ 0.26
SMC6-201ENST00000351948 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.68■□□□□ 0.26
SMC6-201ENST00000351948 AKAP17AQ02040 695 aaKnown RBP16.68■□□□□ 0.26
SMC6-201ENST00000351948 SF3B2Q13435 895 aaKnown RBP16.68■□□□□ 0.26
SMC6-201ENST00000351948 GOLGA6L6A8MZA4 724 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 MARCH6O60337 910 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 CDC45O75419 566 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 ANXA1P04083 346 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 EXOC6BQ9Y2D4 811 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 CFAP65Q6ZU64 1925 aaKnown RBP16.67■□□□□ 0.26
SMC6-201ENST00000351948 PZPP20742 1482 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 CPLX1O14810 134 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 AMOTL1Q8IY63 956 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 NFXL1Q6ZNB6 911 aa16.67■□□□□ 0.26
SMC6-201ENST00000351948 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
SMC6-201ENST00000351948 STK11IPQ8N1F8 1099 aa16.66■□□□□ 0.26
SMC6-201ENST00000351948 RNF20Q5VTR2 975 aa16.66■□□□□ 0.26
SMC6-201ENST00000351948 RALGAPBQ86X10 1494 aa16.66■□□□□ 0.26
SMC6-201ENST00000351948 LRRC59Q96AG4 307 aaKnown RBP16.66■□□□□ 0.26
SMC6-201ENST00000351948 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
SMC6-201ENST00000351948 CARD14Q9BXL6 1004 aa16.66■□□□□ 0.26
SMC6-201ENST00000351948 AMOTQ4VCS5 1084 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 CNTROBQ8N137 903 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 IFT57Q9NWB7 429 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 CT47B1P0C2W7 299 aaPredicted RBP16.65■□□□□ 0.26
SMC6-201ENST00000351948 AAMPQ13685 434 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 SAMD9Q5K651 1589 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 CCDC57Q2TAC2 916 aa16.65■□□□□ 0.26
SMC6-201ENST00000351948 SHANK2Q9UPX8 1470 aa16.64■□□□□ 0.25
SMC6-201ENST00000351948 LRRCC1Q9C099 1032 aa16.64■□□□□ 0.25
SMC6-201ENST00000351948 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.25
SMC6-201ENST00000351948 EXOC5O00471 708 aa16.64■□□□□ 0.25
SMC6-201ENST00000351948 STARD3NLO95772 234 aa16.64■□□□□ 0.25
SMC6-201ENST00000351948 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
SMC6-201ENST00000351948 YEATS2Q9ULM3 1422 aa16.63■□□□□ 0.25
SMC6-201ENST00000351948 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
SMC6-201ENST00000351948 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
SMC6-201ENST00000351948 MYD88Q99836 296 aa16.63■□□□□ 0.25
SMC6-201ENST00000351948 NRDCO43847 1150 aa16.63■□□□□ 0.25
SMC6-201ENST00000351948 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
SMC6-201ENST00000351948 SYAP1Q96A49 352 aaPredicted RBP16.63■□□□□ 0.25
SMC6-201ENST00000351948 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
SMC6-201ENST00000351948 AACSQ86V21 672 aa16.62■□□□□ 0.25
SMC6-201ENST00000351948 ATP10AO60312 1499 aa16.62■□□□□ 0.25
SMC6-201ENST00000351948 CPLX2Q6PUV4 134 aaKnown RBP16.62■□□□□ 0.25
SMC6-201ENST00000351948 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
SMC6-201ENST00000351948 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
SMC6-201ENST00000351948 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
SMC6-201ENST00000351948 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
SMC6-201ENST00000351948 FKBP4Q02790 459 aaKnown RBP eCLIP16.61■□□□□ 0.25
SMC6-201ENST00000351948 NCBP3Q53F19 620 aaKnown RBP16.61■□□□□ 0.25
SMC6-201ENST00000351948 TTC39AQ5SRH9 613 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
SMC6-201ENST00000351948 C19orf44Q9H6X5 657 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 MBIPQ9NS73 344 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
SMC6-201ENST00000351948 NUTM1Q86Y26 1132 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 NPHP3Q7Z494 1330 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
SMC6-201ENST00000351948 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
SMC6-201ENST00000351948 GPTP24298 496 aa16.6■□□□□ 0.25
SMC6-201ENST00000351948 NAP1L5Q96NT1 182 aaPredicted RBP16.6■□□□□ 0.25
SMC6-201ENST00000351948 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
SMC6-201ENST00000351948 SLC39A6Q13433 755 aa16.6■□□□□ 0.25
SMC6-201ENST00000351948 DDX17Q92841 729 aaKnown RBP16.6■□□□□ 0.25
SMC6-201ENST00000351948 EIF4A2Q14240 407 aaKnown RBP16.6■□□□□ 0.25
SMC6-201ENST00000351948 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
SMC6-201ENST00000351948 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
SMC6-201ENST00000351948 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 NSD2O96028 1365 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 ERC1Q8IUD2 1116 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
SMC6-201ENST00000351948 ACSBG1Q96GR2 724 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms