RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 HMOX1P09601 288 aa30.39■■■□□ 2.46
USP25-203ENST00000351097 CANXP27824 592 aaKnown RBP30.39■■■□□ 2.46
USP25-203ENST00000351097 RIPK4P57078 832 aa30.39■■■□□ 2.46
USP25-203ENST00000351097 RBM33Q96EV2 1170 aaKnown RBP30.38■■■□□ 2.45
USP25-203ENST00000351097 RGS3P49796 1198 aa30.35■■■□□ 2.45
USP25-203ENST00000351097 PHACTR3Q96KR7 559 aa30.35■■■□□ 2.45
USP25-203ENST00000351097 CLUAP1Q96AJ1 413 aa30.34■■■□□ 2.45
USP25-203ENST00000351097 RARSP54136 660 aaKnown RBP30.34■■■□□ 2.45
USP25-203ENST00000351097 ADGRL3Q9HAR2 1447 aa30.33■■■□□ 2.45
USP25-203ENST00000351097 LAS1LQ9Y4W2 734 aaKnown RBP30.33■■■□□ 2.45
USP25-203ENST00000351097 IL16Q14005 1332 aa30.33■■■□□ 2.45
USP25-203ENST00000351097 NEFMP07197 916 aa30.32■■■□□ 2.44
USP25-203ENST00000351097 PANK1Q8TE04 598 aa30.32■■■□□ 2.44
USP25-203ENST00000351097 PIK3C2AO00443 1686 aa30.32■■■□□ 2.44
USP25-203ENST00000351097 IGHDP01880 384 aa30.32■■■□□ 2.44
USP25-203ENST00000351097 COG6Q9Y2V7 657 aa30.31■■■□□ 2.44
USP25-203ENST00000351097 PEAK1Q9H792 1746 aa30.31■■■□□ 2.44
USP25-203ENST00000351097 USP35Q9P2H5 1018 aa30.31■■■□□ 2.44
USP25-203ENST00000351097 EIF4A2Q14240 407 aaKnown RBP30.3■■■□□ 2.44
USP25-203ENST00000351097 TSR2Q969E8 191 aaKnown RBP30.3■■■□□ 2.44
USP25-203ENST00000351097 SOX12O15370 315 aa30.29■■■□□ 2.44
USP25-203ENST00000351097 NFE2L2Q16236 605 aa30.29■■■□□ 2.44
USP25-203ENST00000351097 FRAT1Q92837 279 aaPredicted RBP30.29■■■□□ 2.44
USP25-203ENST00000351097 AAMPQ13685 434 aa30.28■■■□□ 2.44
USP25-203ENST00000351097 NWD1Q149M9 1564 aa30.27■■■□□ 2.44
USP25-203ENST00000351097 HSP90AB2PQ58FF8 381 aa30.27■■■□□ 2.44
USP25-203ENST00000351097 PHF8Q9UPP1 1060 aa30.27■■■□□ 2.44
USP25-203ENST00000351097 MAP3K19Q56UN5 1328 aa30.26■■■□□ 2.44
USP25-203ENST00000351097 NLRP6P59044 892 aa30.24■■■□□ 2.43
USP25-203ENST00000351097 CT47B1P0C2W7 299 aaPredicted RBP30.22■■■□□ 2.43
USP25-203ENST00000351097 EXOSC9Q06265 439 aaKnown RBP30.22■■■□□ 2.43
USP25-203ENST00000351097 AEBP1Q8IUX7 1158 aa30.21■■■□□ 2.43
USP25-203ENST00000351097 DAXXQ9UER7 740 aaPredicted RBP30.21■■■□□ 2.43
USP25-203ENST00000351097 SBNO1A3KN83 1393 aa30.21■■■□□ 2.43
USP25-203ENST00000351097 FLT4P35916 1363 aa30.2■■■□□ 2.42
USP25-203ENST00000351097 SULT6B1Q6IMI4 303 aa30.2■■■□□ 2.42
USP25-203ENST00000351097 C14orf37Q86TY3 774 aa30.2■■■□□ 2.42
USP25-203ENST00000351097 BCL2L13Q9BXK5 485 aa30.2■■■□□ 2.42
USP25-203ENST00000351097 MARF1Q9Y4F3 1742 aaKnown RBP30.2■■■□□ 2.42
USP25-203ENST00000351097 USP54Q70EL1 1684 aa30.19■■■□□ 2.42
USP25-203ENST00000351097 ABTB2Q8N961 1025 aa30.19■■■□□ 2.42
USP25-203ENST00000351097 RGPD1P0DJD0 1748 aa30.19■■■□□ 2.42
USP25-203ENST00000351097 NUTM2GQ5VZR2 741 aa30.18■■■□□ 2.42
USP25-203ENST00000351097 ESCO1Q5FWF5 840 aa30.18■■■□□ 2.42
USP25-203ENST00000351097 RLBP1P12271 317 aa30.17■■■□□ 2.42
USP25-203ENST00000351097 VIRMAQ69YN4 1812 aaKnown RBP30.16■■■□□ 2.42
USP25-203ENST00000351097 THUMPD2Q9BTF0 503 aaKnown RBP30.15■■■□□ 2.42
USP25-203ENST00000351097 AMPHP49418 695 aa30.14■■■□□ 2.41
USP25-203ENST00000351097 SLC4A3P48751 1232 aa30.13■■■□□ 2.41
USP25-203ENST00000351097 CALD1Q05682 793 aaKnown RBP30.13■■■□□ 2.41
USP25-203ENST00000351097 PROSER2Q86WR7 435 aaPredicted RBP30.13■■■□□ 2.41
USP25-203ENST00000351097 TNNQ9UQP3 1299 aa30.13■■■□□ 2.41
USP25-203ENST00000351097 LMOD3Q0VAK6 560 aa30.12■■■□□ 2.41
USP25-203ENST00000351097 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
USP25-203ENST00000351097 DLG5Q8TDM6 1919 aa30.11■■■□□ 2.41
USP25-203ENST00000351097 PCDHB15Q9Y5E8 787 aa30.11■■■□□ 2.41
USP25-203ENST00000351097 PSME1Q06323 249 aa30.1■■■□□ 2.41
USP25-203ENST00000351097 KIF24Q5T7B8 1368 aa30.1■■■□□ 2.41
USP25-203ENST00000351097 ORAI2Q96SN7 254 aa30.1■■■□□ 2.41
USP25-203ENST00000351097 IFT57Q9NWB7 429 aa30.09■■■□□ 2.41
USP25-203ENST00000351097 FAM83GA6ND36 823 aa30.08■■■□□ 2.41
USP25-203ENST00000351097 ZNF853P0CG23 659 aa30.08■■■□□ 2.41
USP25-203ENST00000351097 ZKSCAN2Q63HK3 967 aa30.08■■■□□ 2.41
USP25-203ENST00000351097 SSH1Q8WYL5 1049 aa30.08■■■□□ 2.41
USP25-203ENST00000351097 GNAI1P63096 354 aa30.07■■■□□ 2.4
USP25-203ENST00000351097 SMC4Q9NTJ3 1288 aa30.07■■■□□ 2.4
USP25-203ENST00000351097 HOXC9P31274 260 aa30.07■■■□□ 2.4
USP25-203ENST00000351097 MVPQ14764 893 aaKnown RBP30.07■■■□□ 2.4
USP25-203ENST00000351097 RWDD1Q9H446 243 aaPredicted RBP30.05■■■□□ 2.4
USP25-203ENST00000351097 IGSF1Q8N6C5 1336 aa30.05■■■□□ 2.4
USP25-203ENST00000351097 KDRP35968 1356 aa30.05■■■□□ 2.4
USP25-203ENST00000351097 EYA1Q99502 592 aa30.05■■■□□ 2.4
USP25-203ENST00000351097 USP19O94966 1318 aa30.04■■■□□ 2.4
USP25-203ENST00000351097 C19orf44Q9H6X5 657 aa30.04■■■□□ 2.4
USP25-203ENST00000351097 DCTN1Q14203 1278 aa30.04■■■□□ 2.4
USP25-203ENST00000351097 DZIP1LQ8IYY4 767 aaKnown RBP30.03■■■□□ 2.4
USP25-203ENST00000351097 CFAP44Q96MT7 982 aa30.03■■■□□ 2.4
USP25-203ENST00000351097 MBIPQ9NS73 344 aa30.03■■■□□ 2.4
USP25-203ENST00000351097 FOXO3O43524 673 aa30.03■■■□□ 2.4
USP25-203ENST00000351097 FTSJ3Q8IY81 847 aaKnown RBP30.03■■■□□ 2.4
USP25-203ENST00000351097 HSPA2P54652 639 aa30.02■■■□□ 2.4
USP25-203ENST00000351097 NFKBIBQ15653 356 aa30.02■■■□□ 2.4
USP25-203ENST00000351097 PDZRN3Q9UPQ7 1066 aa30.01■■■□□ 2.39
USP25-203ENST00000351097 C1orf167Q5SNV9 1468 aa30■■■□□ 2.39
USP25-203ENST00000351097 NFAT5O94916 1531 aa30■■■□□ 2.39
USP25-203ENST00000351097 ALDH1L2Q3SY69 923 aa29.99■■■□□ 2.39
USP25-203ENST00000351097 RTL1A6NKG5 1358 aa29.99■■■□□ 2.39
USP25-203ENST00000351097 STRCP1A6NGW2 1772 aa29.99■■■□□ 2.39
USP25-203ENST00000351097 ZNF428Q96B54 188 aa29.98■■■□□ 2.39
USP25-203ENST00000351097 TMEM94Q12767 1356 aa29.98■■■□□ 2.39
USP25-203ENST00000351097 XPCQ01831 940 aaPredicted RBP29.98■■■□□ 2.39
USP25-203ENST00000351097 VAMP4O75379 141 aa29.97■■■□□ 2.39
USP25-203ENST00000351097 SEC24BO95487 1268 aa29.97■■■□□ 2.39
USP25-203ENST00000351097 TRIM27P14373 513 aa29.97■■■□□ 2.39
USP25-203ENST00000351097 NOB1Q9ULX3 412 aaKnown RBP29.96■■■□□ 2.39
USP25-203ENST00000351097 TSPYL6Q8N831 410 aa29.96■■■□□ 2.39
USP25-203ENST00000351097 MTHFSDQ2M296 383 aaKnown RBP29.95■■■□□ 2.38
USP25-203ENST00000351097 ATF7IPQ6VMQ6 1270 aa29.95■■■□□ 2.38
USP25-203ENST00000351097 MCM10Q7L590 875 aa29.94■■■□□ 2.38
USP25-203ENST00000351097 LTN1O94822 1766 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms