RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
CDK5RAP2-201ENST00000349780 ZNF622Q969S3 477 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■□□ 15.7
CDK5RAP2-201ENST00000349780 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
CDK5RAP2-201ENST00000349780 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
CDK5RAP2-201ENST00000349780 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 RBM33Q96EV2 1170 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 CLSTN1O94985 981 aa13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 SPATA32Q96LK8 384 aa13.9□□□□□ -0.18
CDK5RAP2-201ENST00000349780 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 HDGFL2Q7Z4V5 671 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 RAB3GAP1Q15042 981 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 TSC1Q92574 1164 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MYO6Q9UM54 1294 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 ODF2Q5BJF6 829 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 IGHDP01880 384 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 GGT6Q6P531 493 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 BCL2L12Q9HB09 334 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
CDK5RAP2-201ENST00000349780 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CPSF2Q9P2I0 782 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SPAG9O60271 1321 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 GOLIM4O00461 696 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PAIP2Q9BPZ3 127 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 ARFGAP3Q9NP61 516 aa13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP2-201ENST00000349780 ZNF500O60304 480 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 RIPK4P57078 832 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 TRIM29Q14134 588 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 EFCAB2Q5VUJ9 269 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MAP2K2P36507 400 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 FILIP1LQ4L180 1135 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PSMA5P28066 241 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 LRCH2Q5VUJ6 765 aa13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDK5RAP2-201ENST00000349780 BRPF1P55201 1214 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MIA2Q96PC5 1412 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CPLX1O14810 134 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CCDC186Q7Z3E2 898 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SRRTQ9BXP5 876 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 VPS18Q9P253 973 aa13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MCM3P25205 808 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 GSDMDP57764 484 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PPM1EQ8WY54 764 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 EZRP15311 586 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CCDC181Q5TID7 509 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CEP57Q86XR8 500 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CKAP2LQ8IYA6 745 aa13.84□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
CDK5RAP2-201ENST00000349780 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
CDK5RAP2-201ENST00000349780 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SOX12O15370 315 aa13.83□□□□□ -0.19
CDK5RAP2-201ENST00000349780 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.19
CDK5RAP2-201ENST00000349780 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.19
CDK5RAP2-201ENST00000349780 SNX21Q969T3 373 aa13.83□□□□□ -0.19
CDK5RAP2-201ENST00000349780 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 MCM6Q14566 821 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 C17orf53Q8N3J3 647 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 LIG1P18858 919 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 ME1P48163 572 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 ARHGAP29Q52LW3 1261 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 KIF5CO60282 957 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 FHOD3Q2V2M9 1422 aa13.83□□□□□ -0.2
CDK5RAP2-201ENST00000349780 SEC24BO95487 1268 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 LRPPRCP42704 1394 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 NAA25Q14CX7 972 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 CFAP100Q494V2 611 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 STK38Q15208 465 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 NEBLO76041 1014 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 IFIT2P09913 472 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 SKILP12757 684 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 RPAINQ86UA6 219 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 CNTROBQ8N137 903 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
CDK5RAP2-201ENST00000349780 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
CDK5RAP2-201ENST00000349780 PTGS1P23219 599 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms