RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 ZKSCAN5Q9Y2L8 839 aa18.91■□□□□ 0.62
TRAF6-201ENST00000348124 PRPF40AO75400 957 aaKnown RBP18.91■□□□□ 0.62
TRAF6-201ENST00000348124 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
TRAF6-201ENST00000348124 CHMP4BQ9H444 224 aaKnown RBP18.91■□□□□ 0.62
TRAF6-201ENST00000348124 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
TRAF6-201ENST00000348124 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
TRAF6-201ENST00000348124 GPT2Q8TD30 523 aa18.89■□□□□ 0.62
TRAF6-201ENST00000348124 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
TRAF6-201ENST00000348124 CSPP1Q1MSJ5 1256 aa18.89■□□□□ 0.61
TRAF6-201ENST00000348124 COL3A1P02461 1466 aaPredicted RBP18.89■□□□□ 0.61
TRAF6-201ENST00000348124 ARAP3Q8WWN8 1544 aa18.89■□□□□ 0.61
TRAF6-201ENST00000348124 ATP7AQ04656 1500 aa18.88■□□□□ 0.61
TRAF6-201ENST00000348124 BRPF1P55201 1214 aaPredicted RBP18.88■□□□□ 0.61
TRAF6-201ENST00000348124 RAPGEF3O95398 923 aa18.88■□□□□ 0.61
TRAF6-201ENST00000348124 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
TRAF6-201ENST00000348124 ARID3AQ99856 593 aa18.88■□□□□ 0.61
TRAF6-201ENST00000348124 MCM5P33992 734 aa18.87■□□□□ 0.61
TRAF6-201ENST00000348124 MRPL50Q8N5N7 158 aaKnown RBP18.87■□□□□ 0.61
TRAF6-201ENST00000348124 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
TRAF6-201ENST00000348124 EFCAB6Q5THR3 1501 aa18.87■□□□□ 0.61
TRAF6-201ENST00000348124 DYNC1I1O14576 645 aa18.87■□□□□ 0.61
TRAF6-201ENST00000348124 PLEKHM2Q8IWE5 1019 aa18.87■□□□□ 0.61
TRAF6-201ENST00000348124 ZGPATQ8N5A5 531 aaKnown RBP18.87■□□□□ 0.61
TRAF6-201ENST00000348124 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
TRAF6-201ENST00000348124 MROH1Q8NDA8 1641 aa18.86■□□□□ 0.61
TRAF6-201ENST00000348124 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
TRAF6-201ENST00000348124 ZNF428Q96B54 188 aa18.86■□□□□ 0.61
TRAF6-201ENST00000348124 DIAPH1O60610 1272 aaKnown RBP18.86■□□□□ 0.61
TRAF6-201ENST00000348124 CCDC39Q9UFE4 941 aa18.86■□□□□ 0.61
TRAF6-201ENST00000348124 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
TRAF6-201ENST00000348124 TULP4Q9NRJ4 1543 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 PIK3R4Q99570 1358 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 SYCE3A1L190 88 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 LRSAM1Q6UWE0 723 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 MTERF4Q7Z6M4 381 aaKnown RBP18.85■□□□□ 0.61
TRAF6-201ENST00000348124 TMEM63CQ9P1W3 806 aa18.85■□□□□ 0.61
TRAF6-201ENST00000348124 VAMP4O75379 141 aa18.84■□□□□ 0.61
TRAF6-201ENST00000348124 SAFB2Q14151 953 aaKnown RBP eCLIP18.84■□□□□ 0.61
TRAF6-201ENST00000348124 SASS6Q6UVJ0 657 aa18.84■□□□□ 0.61
TRAF6-201ENST00000348124 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
TRAF6-201ENST00000348124 ZDHHC9Q9Y397 364 aa18.84■□□□□ 0.61
TRAF6-201ENST00000348124 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
TRAF6-201ENST00000348124 TTC22Q5TAA0 569 aa18.83■□□□□ 0.6
TRAF6-201ENST00000348124 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
TRAF6-201ENST00000348124 PTCH1Q13635 1447 aa18.83■□□□□ 0.6
TRAF6-201ENST00000348124 TSPYL6Q8N831 410 aa18.83■□□□□ 0.6
TRAF6-201ENST00000348124 ST18O60284 1047 aa18.82■□□□□ 0.6
TRAF6-201ENST00000348124 NSFL1CQ9UNZ2 370 aaKnown RBP18.82■□□□□ 0.6
TRAF6-201ENST00000348124 ABCC4O15439 1325 aa18.82■□□□□ 0.6
TRAF6-201ENST00000348124 ELL2O00472 640 aaPredicted RBP18.82■□□□□ 0.6
TRAF6-201ENST00000348124 INTS3Q68E01 1043 aaKnown RBP18.82■□□□□ 0.6
TRAF6-201ENST00000348124 RNF214Q8ND24 703 aa18.81■□□□□ 0.6
TRAF6-201ENST00000348124 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
TRAF6-201ENST00000348124 FYB1O15117 783 aa18.81■□□□□ 0.6
TRAF6-201ENST00000348124 SMAP1Q8IYB5 467 aaPredicted RBP18.81■□□□□ 0.6
TRAF6-201ENST00000348124 C16orf71Q8IYS4 520 aaPredicted RBP18.81■□□□□ 0.6
TRAF6-201ENST00000348124 PRKAR2BP31323 418 aa18.8■□□□□ 0.6
TRAF6-201ENST00000348124 NUTM2DQ5VT03 806 aaPredicted RBP18.8■□□□□ 0.6
TRAF6-201ENST00000348124 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
TRAF6-201ENST00000348124 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
TRAF6-201ENST00000348124 SRPK2P78362 688 aaKnown RBP18.8■□□□□ 0.6
TRAF6-201ENST00000348124 FCHSD2O94868 740 aa18.79■□□□□ 0.6
TRAF6-201ENST00000348124 PPLO60437 1756 aa18.79■□□□□ 0.6
TRAF6-201ENST00000348124 PTMAP06454 111 aaKnown RBP18.78■□□□□ 0.6
TRAF6-201ENST00000348124 DCTPP1Q9H773 170 aa18.78■□□□□ 0.6
TRAF6-201ENST00000348124 ATAD2Q6PL18 1390 aa18.78■□□□□ 0.6
TRAF6-201ENST00000348124 OTUD7AQ8TE49 926 aaPredicted RBP18.78■□□□□ 0.6
TRAF6-201ENST00000348124 GLI2P10070 1586 aa18.77■□□□□ 0.6
TRAF6-201ENST00000348124 RPGRIP1LQ68CZ1 1315 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 MBD3O95983 291 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 SDSP20132 328 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 PRDM10Q9NQV6 1147 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 PNPLA6Q8IY17 1366 aa18.76■□□□□ 0.59
TRAF6-201ENST00000348124 KIAA2012Q0VF49 1180 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 API5Q9BZZ5 524 aaKnown RBP18.75■□□□□ 0.59
TRAF6-201ENST00000348124 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 ZBTB7CA1YPR0 619 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 PHACTR3Q96KR7 559 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 MBIPQ9NS73 344 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
TRAF6-201ENST00000348124 GNAI1P63096 354 aa18.74■□□□□ 0.59
TRAF6-201ENST00000348124 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
TRAF6-201ENST00000348124 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRAF6-201ENST00000348124 TWISTNBQ3B726 338 aaPredicted RBP18.74■□□□□ 0.59
TRAF6-201ENST00000348124 TSPY26PQ9H489 355 aa18.74■□□□□ 0.59
TRAF6-201ENST00000348124 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
TRAF6-201ENST00000348124 ARHGEF28Q8N1W1 1705 aaKnown RBP18.73■□□□□ 0.59
TRAF6-201ENST00000348124 LMTK2Q8IWU2 1503 aa18.73■□□□□ 0.59
TRAF6-201ENST00000348124 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
TRAF6-201ENST00000348124 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
TRAF6-201ENST00000348124 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
TRAF6-201ENST00000348124 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
TRAF6-201ENST00000348124 REC8O95072 547 aa18.73■□□□□ 0.59
TRAF6-201ENST00000348124 DNTTIP2Q5QJE6 756 aaKnown RBP18.73■□□□□ 0.59
TRAF6-201ENST00000348124 STK26Q9P289 416 aa18.73■□□□□ 0.59
TRAF6-201ENST00000348124 NPATQ14207 1427 aa18.72■□□□□ 0.59
TRAF6-201ENST00000348124 APBB1O00213 710 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms