RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
SMARCC2-202ENST00000347471 PDE4AP27815 886 aa21.96■■□□□ 1.11
SMARCC2-202ENST00000347471 PDE3AQ14432 1141 aa21.96■■□□□ 1.11
SMARCC2-202ENST00000347471 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
SMARCC2-202ENST00000347471 SETD1AO15047 1707 aaKnown RBP21.95■■□□□ 1.1
SMARCC2-202ENST00000347471 MBIPQ9NS73 344 aa21.94■■□□□ 1.1
SMARCC2-202ENST00000347471 USP32Q8NFA0 1604 aa21.94■■□□□ 1.1
SMARCC2-202ENST00000347471 NECTIN2Q92692 538 aa21.94■■□□□ 1.1
SMARCC2-202ENST00000347471 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 TRIM27P14373 513 aa21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 IQSEC2Q5JU85 1478 aa21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 COL3A1P02461 1466 aaPredicted RBP21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 GNAI1P63096 354 aa21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 MED14O60244 1454 aa21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
SMARCC2-202ENST00000347471 CDC42BPGQ6DT37 1551 aa21.92■■□□□ 1.1
SMARCC2-202ENST00000347471 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
SMARCC2-202ENST00000347471 LMOD3Q0VAK6 560 aa21.92■■□□□ 1.1
SMARCC2-202ENST00000347471 CEP170BQ9Y4F5 1589 aaPredicted RBP21.92■■□□□ 1.1
SMARCC2-202ENST00000347471 TWISTNBQ3B726 338 aaPredicted RBP21.91■■□□□ 1.1
SMARCC2-202ENST00000347471 EYA1Q99502 592 aa21.91■■□□□ 1.1
SMARCC2-202ENST00000347471 SLIT1O75093 1534 aa21.9■■□□□ 1.1
SMARCC2-202ENST00000347471 TTC21AQ8NDW8 1320 aa21.9■■□□□ 1.1
SMARCC2-202ENST00000347471 PCDHB15Q9Y5E8 787 aa21.9■■□□□ 1.1
SMARCC2-202ENST00000347471 C8orf58Q8NAV2 365 aa21.9■■□□□ 1.1
SMARCC2-202ENST00000347471 TMEM57Q8N5G2 664 aa21.89■■□□□ 1.1
SMARCC2-202ENST00000347471 AATKQ6ZMQ8 1374 aa21.89■■□□□ 1.1
SMARCC2-202ENST00000347471 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.09
SMARCC2-202ENST00000347471 ATF7IPQ6VMQ6 1270 aa21.89■■□□□ 1.09
SMARCC2-202ENST00000347471 MSH5O43196 834 aa21.89■■□□□ 1.09
SMARCC2-202ENST00000347471 C1orf115Q9H7X2 142 aa21.89■■□□□ 1.09
SMARCC2-202ENST00000347471 ZC3H6P61129 1189 aaKnown RBP21.88■■□□□ 1.09
SMARCC2-202ENST00000347471 IPO8O15397 1037 aaKnown RBP21.88■■□□□ 1.09
SMARCC2-202ENST00000347471 ATF3P18847 181 aa21.87■■□□□ 1.09
SMARCC2-202ENST00000347471 MVPQ14764 893 aaKnown RBP21.87■■□□□ 1.09
SMARCC2-202ENST00000347471 MTHFSDQ2M296 383 aaKnown RBP21.87■■□□□ 1.09
SMARCC2-202ENST00000347471 MAP2P11137 1827 aaKnown RBP21.87■■□□□ 1.09
SMARCC2-202ENST00000347471 NPHP4O75161 1426 aaPredicted RBP21.86■■□□□ 1.09
SMARCC2-202ENST00000347471 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
SMARCC2-202ENST00000347471 LRRC59Q96AG4 307 aaKnown RBP21.85■■□□□ 1.09
SMARCC2-202ENST00000347471 TSPYL4Q9UJ04 414 aa21.85■■□□□ 1.09
SMARCC2-202ENST00000347471 HOXC9P31274 260 aa21.85■■□□□ 1.09
SMARCC2-202ENST00000347471 DIP2AQ14689 1571 aa21.84■■□□□ 1.09
SMARCC2-202ENST00000347471 CDK12Q9NYV4 1490 aaPredicted RBP21.84■■□□□ 1.09
SMARCC2-202ENST00000347471 IFT57Q9NWB7 429 aa21.84■■□□□ 1.09
SMARCC2-202ENST00000347471 FLT4P35916 1363 aa21.83■■□□□ 1.09
SMARCC2-202ENST00000347471 IL16Q14005 1332 aa21.83■■□□□ 1.09
SMARCC2-202ENST00000347471 CFAP44Q96MT7 982 aa21.83■■□□□ 1.09
SMARCC2-202ENST00000347471 KIF20BQ96Q89 1820 aa21.83■■□□□ 1.09
SMARCC2-202ENST00000347471 KDM2BQ8NHM5 1336 aa21.83■■□□□ 1.08
SMARCC2-202ENST00000347471 VAMP4O75379 141 aa21.82■■□□□ 1.08
SMARCC2-202ENST00000347471 MS4A1P11836 297 aa21.82■■□□□ 1.08
SMARCC2-202ENST00000347471 KIF16BQ96L93 1317 aa21.82■■□□□ 1.08
SMARCC2-202ENST00000347471 OVOS2A0A0J9YW53 1432 aa21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 OVOS2Q6IE36 1432 aa21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 SLC4A10Q6U841 1118 aa21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 RWDD1Q9H446 243 aaPredicted RBP21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 KRT28Q7Z3Y7 464 aa21.81■■□□□ 1.08
SMARCC2-202ENST00000347471 DDX19BQ9UMR2 479 aa21.8■■□□□ 1.08
SMARCC2-202ENST00000347471 BACH2Q9BYV9 841 aa21.79■■□□□ 1.08
SMARCC2-202ENST00000347471 CT47B1P0C2W7 299 aaPredicted RBP21.79■■□□□ 1.08
SMARCC2-202ENST00000347471 APBB1O00213 710 aa21.79■■□□□ 1.08
SMARCC2-202ENST00000347471 SBNO1A3KN83 1393 aa21.78■■□□□ 1.08
SMARCC2-202ENST00000347471 ZBTB47Q9UFB7 747 aaPredicted RBP21.77■■□□□ 1.08
SMARCC2-202ENST00000347471 PDZRN3Q9UPQ7 1066 aa21.77■■□□□ 1.08
SMARCC2-202ENST00000347471 PIK3R4Q99570 1358 aa21.77■■□□□ 1.08
SMARCC2-202ENST00000347471 CSB-PGBD3P0DP91 1061 aa21.77■■□□□ 1.08
SMARCC2-202ENST00000347471 HAP1P54257 671 aaPredicted RBP21.76■■□□□ 1.07
SMARCC2-202ENST00000347471 GCP02774 474 aa21.76■■□□□ 1.07
SMARCC2-202ENST00000347471 SETD1BQ9UPS6 1966 aaKnown RBP21.76■■□□□ 1.07
SMARCC2-202ENST00000347471 C19orf44Q9H6X5 657 aa21.76■■□□□ 1.07
SMARCC2-202ENST00000347471 ITSN1Q15811 1721 aa21.76■■□□□ 1.07
SMARCC2-202ENST00000347471 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
SMARCC2-202ENST00000347471 NBR1Q14596 966 aa21.75■■□□□ 1.07
SMARCC2-202ENST00000347471 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
SMARCC2-202ENST00000347471 NBPF6Q5VWK0 638 aa21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 NBPF4Q96M43 638 aa21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 DAXXQ9UER7 740 aaPredicted RBP21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 SLC4A2P04920 1241 aa21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 EIF2S2P20042 333 aaKnown RBP21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
SMARCC2-202ENST00000347471 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
SMARCC2-202ENST00000347471 CHRNA2Q15822 529 aa21.73■■□□□ 1.07
SMARCC2-202ENST00000347471 RGPD8O14715 1765 aaPredicted RBP21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 NLRP2Q9NX02 1062 aa21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 USP31Q70CQ4 1352 aa21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 ALDH1L2Q3SY69 923 aa21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 TMEM94Q12767 1356 aa21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 LNPKQ9C0E8 428 aa21.72■■□□□ 1.07
SMARCC2-202ENST00000347471 GNAT3A8MTJ3 354 aa21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 FAM161AQ3B820 660 aa21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 NCBP3Q53F19 620 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 NOP58Q9Y2X3 529 aaKnown RBP21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 ANKRD26Q9UPS8 1709 aa21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 F6X3S4 739 aa21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 ADGRB2O60241 1585 aa21.71■■□□□ 1.07
SMARCC2-202ENST00000347471 MPRIPQ6WCQ1 1025 aa21.7■■□□□ 1.06
SMARCC2-202ENST00000347471 ZNF428Q96B54 188 aa21.7■■□□□ 1.06
SMARCC2-202ENST00000347471 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms