RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C11orf95C9JLR9 678 aaPredicted RBP22.51■■□□□ 1.19
RAB5C-201ENST00000346213 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
RAB5C-201ENST00000346213 KRT27Q7Z3Y8 459 aa22.49■■□□□ 1.19
RAB5C-201ENST00000346213 CRB1P82279 1406 aa22.48■■□□□ 1.19
RAB5C-201ENST00000346213 A0A0G2JS52 829 aa22.47■■□□□ 1.19
RAB5C-201ENST00000346213 MYT1Q01538 1121 aa22.47■■□□□ 1.19
RAB5C-201ENST00000346213 LTN1O94822 1766 aa22.47■■□□□ 1.19
RAB5C-201ENST00000346213 EVA1CP58658 441 aa22.46■■□□□ 1.19
RAB5C-201ENST00000346213 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
RAB5C-201ENST00000346213 FYB1O15117 783 aa22.45■■□□□ 1.18
RAB5C-201ENST00000346213 BARGINQ6ZT62 677 aa22.45■■□□□ 1.18
RAB5C-201ENST00000346213 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
RAB5C-201ENST00000346213 WDR17Q8IZU2 1322 aa22.44■■□□□ 1.18
RAB5C-201ENST00000346213 ABCC6O95255 1503 aa22.43■■□□□ 1.18
RAB5C-201ENST00000346213 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
RAB5C-201ENST00000346213 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.18
RAB5C-201ENST00000346213 TCP11L2Q8N4U5 519 aa22.43■■□□□ 1.18
RAB5C-201ENST00000346213 NSD3Q9BZ95 1437 aa22.43■■□□□ 1.18
RAB5C-201ENST00000346213 WNK3Q9BYP7 1800 aa22.43■■□□□ 1.18
RAB5C-201ENST00000346213 PARP4Q9UKK3 1724 aaKnown RBP22.42■■□□□ 1.18
RAB5C-201ENST00000346213 DISP2A7MBM2 1401 aa22.41■■□□□ 1.18
RAB5C-201ENST00000346213 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
RAB5C-201ENST00000346213 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
RAB5C-201ENST00000346213 DEFB132Q7Z7B7 95 aa22.41■■□□□ 1.18
RAB5C-201ENST00000346213 MAP3K19Q56UN5 1328 aa22.4■■□□□ 1.18
RAB5C-201ENST00000346213 ERBB3P21860 1342 aa22.39■■□□□ 1.18
RAB5C-201ENST00000346213 KIF20BQ96Q89 1820 aa22.39■■□□□ 1.17
RAB5C-201ENST00000346213 TOM1L2Q6ZVM7 507 aa22.39■■□□□ 1.17
RAB5C-201ENST00000346213 PEAK1Q9H792 1746 aa22.39■■□□□ 1.17
RAB5C-201ENST00000346213 TNS1Q9HBL0 1735 aaKnown RBP22.38■■□□□ 1.17
RAB5C-201ENST00000346213 POLR3GLQ9BT43 218 aa22.37■■□□□ 1.17
RAB5C-201ENST00000346213 SRCAPQ6ZRS2 3230 aa22.37■■□□□ 1.17
RAB5C-201ENST00000346213 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
RAB5C-201ENST00000346213 CDCA8Q53HL2 280 aa22.36■■□□□ 1.17
RAB5C-201ENST00000346213 COG3Q96JB2 828 aa22.36■■□□□ 1.17
RAB5C-201ENST00000346213 THRAP3Q9Y2W1 955 aaKnown RBP22.36■■□□□ 1.17
RAB5C-201ENST00000346213 CARD10Q9BWT7 1032 aa22.34■■□□□ 1.17
RAB5C-201ENST00000346213 ANKRD24Q8TF21 1146 aa22.33■■□□□ 1.17
RAB5C-201ENST00000346213 IP6K1Q92551 441 aa22.33■■□□□ 1.16
RAB5C-201ENST00000346213 CSB-PGBD3P0DP91 1061 aa22.32■■□□□ 1.16
RAB5C-201ENST00000346213 HOXC9P31274 260 aa22.32■■□□□ 1.16
RAB5C-201ENST00000346213 PTF1AQ7RTS3 328 aa22.32■■□□□ 1.16
RAB5C-201ENST00000346213 FAM208AQ9UK61 1670 aaKnown RBP22.31■■□□□ 1.16
RAB5C-201ENST00000346213 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
RAB5C-201ENST00000346213 RGPD2P0DJD1 1756 aa22.3■■□□□ 1.16
RAB5C-201ENST00000346213 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
RAB5C-201ENST00000346213 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
RAB5C-201ENST00000346213 TRIM37O94972 964 aa22.29■■□□□ 1.16
RAB5C-201ENST00000346213 MARCH10Q8NA82 808 aaPredicted RBP22.29■■□□□ 1.16
RAB5C-201ENST00000346213 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
RAB5C-201ENST00000346213 PANK3Q9H999 370 aa22.28■■□□□ 1.16
RAB5C-201ENST00000346213 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
RAB5C-201ENST00000346213 EMILIN1Q9Y6C2 1016 aa22.27■■□□□ 1.16
RAB5C-201ENST00000346213 CCDC7Q96M83 1385 aa22.26■■□□□ 1.15
RAB5C-201ENST00000346213 EN1Q05925 392 aaPredicted RBP22.26■■□□□ 1.15
RAB5C-201ENST00000346213 PDE3BQ13370 1112 aa22.26■■□□□ 1.15
RAB5C-201ENST00000346213 TNS2Q63HR2 1409 aa22.26■■□□□ 1.15
RAB5C-201ENST00000346213 ANKRD26Q9UPS8 1709 aa22.25■■□□□ 1.15
RAB5C-201ENST00000346213 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
RAB5C-201ENST00000346213 DDB1Q16531 1140 aa22.24■■□□□ 1.15
RAB5C-201ENST00000346213 HSP90AB2PQ58FF8 381 aa22.24■■□□□ 1.15
RAB5C-201ENST00000346213 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
RAB5C-201ENST00000346213 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
RAB5C-201ENST00000346213 MEGF6O75095 1541 aa22.23■■□□□ 1.15
RAB5C-201ENST00000346213 AMPHP49418 695 aa22.23■■□□□ 1.15
RAB5C-201ENST00000346213 USHBP1Q8N6Y0 703 aa22.22■■□□□ 1.15
RAB5C-201ENST00000346213 SBF2Q86WG5 1849 aa22.21■■□□□ 1.15
RAB5C-201ENST00000346213 EZH2Q15910 746 aaKnown RBP22.21■■□□□ 1.15
RAB5C-201ENST00000346213 NBPF6Q5VWK0 638 aa22.21■■□□□ 1.15
RAB5C-201ENST00000346213 NBPF4Q96M43 638 aa22.21■■□□□ 1.15
RAB5C-201ENST00000346213 CGNL1Q0VF96 1302 aa22.21■■□□□ 1.15
RAB5C-201ENST00000346213 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.15
RAB5C-201ENST00000346213 SHANK3Q9BYB0 1731 aa22.2■■□□□ 1.14
RAB5C-201ENST00000346213 CAMKK2Q96RR4 588 aa22.2■■□□□ 1.14
RAB5C-201ENST00000346213 WASHC2AQ641Q2 1341 aa22.19■■□□□ 1.14
RAB5C-201ENST00000346213 INSRP06213 1382 aa22.18■■□□□ 1.14
RAB5C-201ENST00000346213 FLT4P35916 1363 aa22.18■■□□□ 1.14
RAB5C-201ENST00000346213 IL2RBP14784 551 aa22.18■■□□□ 1.14
RAB5C-201ENST00000346213 BCL9O00512 1426 aa22.18■■□□□ 1.14
RAB5C-201ENST00000346213 TNNT2P45379 298 aaPredicted RBP22.17■■□□□ 1.14
RAB5C-201ENST00000346213 SF3B2Q13435 895 aaKnown RBP22.17■■□□□ 1.14
RAB5C-201ENST00000346213 POLKQ9UBT6 870 aa22.17■■□□□ 1.14
RAB5C-201ENST00000346213 RREB1Q92766 1687 aa22.17■■□□□ 1.14
RAB5C-201ENST00000346213 BAG6P46379 1132 aa22.17■■□□□ 1.14
RAB5C-201ENST00000346213 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
RAB5C-201ENST00000346213 APBA3O96018 575 aa22.16■■□□□ 1.14
RAB5C-201ENST00000346213 KCNQ2O43526 872 aa22.15■■□□□ 1.14
RAB5C-201ENST00000346213 NUP188Q5SRE5 1749 aa22.14■■□□□ 1.14
RAB5C-201ENST00000346213 AMER1Q5JTC6 1135 aaPredicted RBP22.14■■□□□ 1.14
RAB5C-201ENST00000346213 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
RAB5C-201ENST00000346213 EXOC5O00471 708 aa22.14■■□□□ 1.13
RAB5C-201ENST00000346213 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
RAB5C-201ENST00000346213 KIF24Q5T7B8 1368 aa22.13■■□□□ 1.13
RAB5C-201ENST00000346213 MAP2P11137 1827 aaKnown RBP22.12■■□□□ 1.13
RAB5C-201ENST00000346213 SMG6Q86US8 1419 aaKnown RBP22.12■■□□□ 1.13
RAB5C-201ENST00000346213 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
RAB5C-201ENST00000346213 NHSQ6T4R5 1651 aa22.11■■□□□ 1.13
RAB5C-201ENST00000346213 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
RAB5C-201ENST00000346213 ACSBG1Q96GR2 724 aa22.11■■□□□ 1.13
RAB5C-201ENST00000346213 PROM2Q8N271 834 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms