RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
SRPK1-201ENST00000346162 ATF3P18847 181 aa18.56■□□□□ 0.56
SRPK1-201ENST00000346162 CLASRPQ8N2M8 674 aaKnown RBP18.56■□□□□ 0.56
SRPK1-201ENST00000346162 NKTRP30414 1462 aaKnown RBP18.56■□□□□ 0.56
SRPK1-201ENST00000346162 HDGFL1Q5TGJ6 251 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 CHD1LQ86WJ1 897 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 THUMPD2Q9BTF0 503 aaKnown RBP18.55■□□□□ 0.56
SRPK1-201ENST00000346162 FANCAO15360 1455 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 SPC24Q8NBT2 197 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 SSH1Q8WYL5 1049 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 DEF6Q9H4E7 631 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 C14orf93Q9H972 538 aaKnown RBP18.55■□□□□ 0.56
SRPK1-201ENST00000346162 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 NOS1P29475 1434 aa18.55■□□□□ 0.56
SRPK1-201ENST00000346162 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
SRPK1-201ENST00000346162 GTPBP4Q9BZE4 634 aaKnown RBP18.54■□□□□ 0.56
SRPK1-201ENST00000346162 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
SRPK1-201ENST00000346162 IRX3P78415 501 aaPredicted RBP18.54■□□□□ 0.56
SRPK1-201ENST00000346162 FAM135AQ9P2D6 1515 aa18.53■□□□□ 0.56
SRPK1-201ENST00000346162 HSP90B2PQ58FF3 399 aa18.53■□□□□ 0.56
SRPK1-201ENST00000346162 CCT4P50991 539 aaKnown RBP18.53■□□□□ 0.56
SRPK1-201ENST00000346162 RABEP1Q15276 862 aa18.53■□□□□ 0.56
SRPK1-201ENST00000346162 LEKR1Q6ZMV7 388 aa18.53■□□□□ 0.56
SRPK1-201ENST00000346162 NEK4P51957 841 aa18.53■□□□□ 0.56
SRPK1-201ENST00000346162 VPS37CA5D8V6 355 aaPredicted RBP18.53■□□□□ 0.56
SRPK1-201ENST00000346162 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
SRPK1-201ENST00000346162 OFD1O75665 1012 aa18.52■□□□□ 0.55
SRPK1-201ENST00000346162 TIGD1Q96MW7 591 aa18.52■□□□□ 0.55
SRPK1-201ENST00000346162 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
SRPK1-201ENST00000346162 TRIM5Q9C035 493 aa18.51■□□□□ 0.55
SRPK1-201ENST00000346162 PLCH2O75038 1416 aa18.51■□□□□ 0.55
SRPK1-201ENST00000346162 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
SRPK1-201ENST00000346162 CNTROBQ8N137 903 aa18.5■□□□□ 0.55
SRPK1-201ENST00000346162 AK7Q96M32 723 aa18.5■□□□□ 0.55
SRPK1-201ENST00000346162 CCDC94Q9BW85 323 aaPredicted RBP18.5■□□□□ 0.55
SRPK1-201ENST00000346162 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
SRPK1-201ENST00000346162 DNAJC2Q99543 621 aaKnown RBP18.5■□□□□ 0.55
SRPK1-201ENST00000346162 WDR62O43379 1518 aa18.5■□□□□ 0.55
SRPK1-201ENST00000346162 H0YHG0 523 aa18.5■□□□□ 0.55
SRPK1-201ENST00000346162 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
SRPK1-201ENST00000346162 IGSF3O75054 1194 aa18.49■□□□□ 0.55
SRPK1-201ENST00000346162 MCM5P33992 734 aa18.49■□□□□ 0.55
SRPK1-201ENST00000346162 VGLL3A8MV65 326 aa18.49■□□□□ 0.55
SRPK1-201ENST00000346162 NME9Q86XW9 330 aa18.49■□□□□ 0.55
SRPK1-201ENST00000346162 K7ELQ4 463 aaPredicted RBP18.49■□□□□ 0.55
SRPK1-201ENST00000346162 NEUROD6Q96NK8 337 aa18.48■□□□□ 0.55
SRPK1-201ENST00000346162 TESK2Q96S53 571 aa18.48■□□□□ 0.55
SRPK1-201ENST00000346162 RDXP35241 583 aaKnown RBP18.48■□□□□ 0.55
SRPK1-201ENST00000346162 PROSER2Q86WR7 435 aaPredicted RBP18.48■□□□□ 0.55
SRPK1-201ENST00000346162 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 SYCE3A1L190 88 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 ZNF530Q6P9A1 599 aaPredicted RBP18.47■□□□□ 0.55
SRPK1-201ENST00000346162 RPAP2Q8IXW5 612 aaPredicted RBP18.47■□□□□ 0.55
SRPK1-201ENST00000346162 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
SRPK1-201ENST00000346162 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 PAXIP1Q6ZW49 1069 aaPredicted RBP18.47■□□□□ 0.55
SRPK1-201ENST00000346162 SRCIN1Q9C0H9 1055 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 LRRCC1Q9C099 1032 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
SRPK1-201ENST00000346162 KIF20AO95235 890 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 MCM2P49736 904 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 ALDH1L2Q3SY69 923 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 CPLX1O14810 134 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 TNPO1Q92973 898 aaKnown RBP18.46■□□□□ 0.55
SRPK1-201ENST00000346162 SYCP2Q9BX26 1530 aa18.46■□□□□ 0.55
SRPK1-201ENST00000346162 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
SRPK1-201ENST00000346162 BICD2Q8TD16 824 aa18.45■□□□□ 0.54
SRPK1-201ENST00000346162 CWC22Q9HCG8 908 aaKnown RBP18.45■□□□□ 0.54
SRPK1-201ENST00000346162 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
SRPK1-201ENST00000346162 NUP160Q12769 1436 aa18.45■□□□□ 0.54
SRPK1-201ENST00000346162 RASSF8Q8NHQ8 419 aa18.45■□□□□ 0.54
SRPK1-201ENST00000346162 MCM10Q7L590 875 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 GPATCH11Q8N954 259 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 DUOX2Q9NRD8 1548 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 PATL2C9JE40 543 aaKnown RBP18.44■□□□□ 0.54
SRPK1-201ENST00000346162 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
SRPK1-201ENST00000346162 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 ACBD3Q9H3P7 528 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 NSD2O96028 1365 aa18.44■□□□□ 0.54
SRPK1-201ENST00000346162 TRDNQ13061 729 aa18.43■□□□□ 0.54
SRPK1-201ENST00000346162 SKIDA1Q1XH10 827 aa18.43■□□□□ 0.54
SRPK1-201ENST00000346162 TRIM27P14373 513 aa18.43■□□□□ 0.54
SRPK1-201ENST00000346162 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.43■□□□□ 0.54
SRPK1-201ENST00000346162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.43■□□□□ 0.54
SRPK1-201ENST00000346162 DENND4BO75064 1496 aaPredicted RBP18.43■□□□□ 0.54
SRPK1-201ENST00000346162 MIS18AQ9NYP9 233 aa18.42■□□□□ 0.54
SRPK1-201ENST00000346162 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
SRPK1-201ENST00000346162 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
SRPK1-201ENST00000346162 PSMA5P28066 241 aa18.41■□□□□ 0.54
SRPK1-201ENST00000346162 ERC1Q8IUD2 1116 aa18.41■□□□□ 0.54
SRPK1-201ENST00000346162 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
SRPK1-201ENST00000346162 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
SRPK1-201ENST00000346162 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.54
SRPK1-201ENST00000346162 HSP90AB3PQ58FF7 597 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms