RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 DDX19BQ9UMR2 479 aa26.63■■□□□ 1.85
TRIM3-201ENST00000345851 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
TRIM3-201ENST00000345851 ANKRD36BQ8N2N9 1353 aa26.62■■□□□ 1.85
TRIM3-201ENST00000345851 RIPK4P57078 832 aa26.62■■□□□ 1.85
TRIM3-201ENST00000345851 LTKP29376 864 aa26.62■■□□□ 1.85
TRIM3-201ENST00000345851 R3HCC1Q9Y3T6 440 aaKnown RBP26.61■■□□□ 1.85
TRIM3-201ENST00000345851 U2AF1L5P0DN76 240 aaPredicted RBP26.61■■□□□ 1.85
TRIM3-201ENST00000345851 U2AF1Q01081 240 aaKnown RBP eCLIP26.61■■□□□ 1.85
TRIM3-201ENST00000345851 SSH1Q8WYL5 1049 aa26.61■■□□□ 1.85
TRIM3-201ENST00000345851 ARID3AQ99856 593 aa26.6■■□□□ 1.85
TRIM3-201ENST00000345851 FBLN1P23142 703 aa26.6■■□□□ 1.85
TRIM3-201ENST00000345851 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
TRIM3-201ENST00000345851 KIF2CQ99661 725 aa26.6■■□□□ 1.85
TRIM3-201ENST00000345851 TMEM57Q8N5G2 664 aa26.6■■□□□ 1.85
TRIM3-201ENST00000345851 GOLGA6L22H0YM25 854 aa26.59■■□□□ 1.85
TRIM3-201ENST00000345851 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.59■■□□□ 1.85
TRIM3-201ENST00000345851 NCLP19338 710 aaKnown RBP26.59■■□□□ 1.85
TRIM3-201ENST00000345851 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.59■■□□□ 1.85
TRIM3-201ENST00000345851 NUTM2FA1L443 756 aa26.58■■□□□ 1.85
TRIM3-201ENST00000345851 NOB1Q9ULX3 412 aaKnown RBP26.58■■□□□ 1.85
TRIM3-201ENST00000345851 CCDC27Q2M243 656 aa26.58■■□□□ 1.85
TRIM3-201ENST00000345851 ATF7IPQ6VMQ6 1270 aa26.58■■□□□ 1.85
TRIM3-201ENST00000345851 GAS2L2Q8NHY3 880 aa26.58■■□□□ 1.85
TRIM3-201ENST00000345851 K7ELQ4 463 aaPredicted RBP26.57■■□□□ 1.84
TRIM3-201ENST00000345851 PTMSP20962 102 aa26.57■■□□□ 1.84
TRIM3-201ENST00000345851 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.57■■□□□ 1.84
TRIM3-201ENST00000345851 PLEKHG5O94827 1062 aa26.56■■□□□ 1.84
TRIM3-201ENST00000345851 CFAP53Q96M91 514 aa26.56■■□□□ 1.84
TRIM3-201ENST00000345851 AK9Q5TCS8 1911 aa26.55■■□□□ 1.84
TRIM3-201ENST00000345851 TMEM2Q9UHN6 1383 aa26.55■■□□□ 1.84
TRIM3-201ENST00000345851 NUCB1Q02818 461 aa26.55■■□□□ 1.84
TRIM3-201ENST00000345851 BAG4O95429 457 aaKnown RBP26.54■■□□□ 1.84
TRIM3-201ENST00000345851 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
TRIM3-201ENST00000345851 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
TRIM3-201ENST00000345851 KLHL40Q2TBA0 621 aa26.53■■□□□ 1.84
TRIM3-201ENST00000345851 CHD1LQ86WJ1 897 aa26.53■■□□□ 1.84
TRIM3-201ENST00000345851 FYB1O15117 783 aa26.53■■□□□ 1.84
TRIM3-201ENST00000345851 PUS7Q96PZ0 661 aaKnown RBP26.53■■□□□ 1.84
TRIM3-201ENST00000345851 ZBTB40Q9NUA8 1239 aa26.53■■□□□ 1.84
TRIM3-201ENST00000345851 CALD1Q05682 793 aaKnown RBP26.52■■□□□ 1.84
TRIM3-201ENST00000345851 TERF2IPQ9NYB0 399 aa26.52■■□□□ 1.84
TRIM3-201ENST00000345851 CAVIN1Q6NZI2 390 aaKnown RBP26.52■■□□□ 1.84
TRIM3-201ENST00000345851 ATAD2Q6PL18 1390 aa26.52■■□□□ 1.84
TRIM3-201ENST00000345851 MCTP1Q6DN14 999 aa26.51■■□□□ 1.83
TRIM3-201ENST00000345851 SETD1AO15047 1707 aaKnown RBP26.5■■□□□ 1.83
TRIM3-201ENST00000345851 HDGFP51858 240 aaKnown RBP26.5■■□□□ 1.83
TRIM3-201ENST00000345851 ANKRD45Q5TZF3 282 aa26.5■■□□□ 1.83
TRIM3-201ENST00000345851 CD163L1Q9NR16 1453 aa26.5■■□□□ 1.83
TRIM3-201ENST00000345851 ABCC11Q96J66 1382 aa26.49■■□□□ 1.83
TRIM3-201ENST00000345851 HDGFL2Q7Z4V5 671 aaPredicted RBP26.49■■□□□ 1.83
TRIM3-201ENST00000345851 BMP2KLQ5H9B9 411 aa26.48■■□□□ 1.83
TRIM3-201ENST00000345851 TBC1D9Q6ZT07 1266 aa26.48■■□□□ 1.83
TRIM3-201ENST00000345851 UBR1Q8IWV7 1749 aa26.48■■□□□ 1.83
TRIM3-201ENST00000345851 UQCRHLA0A096LP55 91 aa26.47■■□□□ 1.83
TRIM3-201ENST00000345851 U2SURPO15042 1029 aaKnown RBP26.47■■□□□ 1.83
TRIM3-201ENST00000345851 UQCRHP07919 91 aa26.47■■□□□ 1.83
TRIM3-201ENST00000345851 WASLO00401 505 aaPredicted RBP26.46■■□□□ 1.83
TRIM3-201ENST00000345851 PRDM4Q9UKN5 801 aa26.46■■□□□ 1.83
TRIM3-201ENST00000345851 RBSNQ9H1K0 784 aa26.46■■□□□ 1.83
TRIM3-201ENST00000345851 C1orf115Q9H7X2 142 aa26.45■■□□□ 1.83
TRIM3-201ENST00000345851 ZRANB1Q9UGI0 708 aa26.45■■□□□ 1.83
TRIM3-201ENST00000345851 ZSCAN23Q3MJ62 389 aa26.45■■□□□ 1.82
TRIM3-201ENST00000345851 CT47B1P0C2W7 299 aaPredicted RBP26.44■■□□□ 1.82
TRIM3-201ENST00000345851 ROBO2Q9HCK4 1378 aa26.44■■□□□ 1.82
TRIM3-201ENST00000345851 IBTKQ9P2D0 1353 aaPredicted RBP26.43■■□□□ 1.82
TRIM3-201ENST00000345851 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.43■■□□□ 1.82
TRIM3-201ENST00000345851 NUDT16Q96DE0 195 aaKnown RBP26.42■■□□□ 1.82
TRIM3-201ENST00000345851 NOL7Q9UMY1 257 aaKnown RBP26.42■■□□□ 1.82
TRIM3-201ENST00000345851 TERF1P54274 439 aa26.41■■□□□ 1.82
TRIM3-201ENST00000345851 ZNF445P59923 1031 aa26.41■■□□□ 1.82
TRIM3-201ENST00000345851 C3P01024 1663 aa26.41■■□□□ 1.82
TRIM3-201ENST00000345851 ADAMTS13Q76LX8 1427 aa26.41■■□□□ 1.82
TRIM3-201ENST00000345851 PRIM1P49642 420 aaKnown RBP26.41■■□□□ 1.82
TRIM3-201ENST00000345851 PKP1Q13835 747 aa26.41■■□□□ 1.82
TRIM3-201ENST00000345851 RBM27Q9P2N5 1060 aaKnown RBP26.4■■□□□ 1.82
TRIM3-201ENST00000345851 EID1Q9Y6B2 187 aa26.4■■□□□ 1.82
TRIM3-201ENST00000345851 TMPOP42166 694 aaKnown RBP26.4■■□□□ 1.82
TRIM3-201ENST00000345851 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
TRIM3-201ENST00000345851 ZBTB7CA1YPR0 619 aa26.39■■□□□ 1.81
TRIM3-201ENST00000345851 CLEC17AQ6ZS10 378 aa26.39■■□□□ 1.81
TRIM3-201ENST00000345851 NME9Q86XW9 330 aa26.39■■□□□ 1.81
TRIM3-201ENST00000345851 MAP7D2Q96T17 732 aa26.38■■□□□ 1.81
TRIM3-201ENST00000345851 PPIP5K1Q6PFW1 1433 aa26.38■■□□□ 1.81
TRIM3-201ENST00000345851 IPO8O15397 1037 aaKnown RBP26.38■■□□□ 1.81
TRIM3-201ENST00000345851 LMBRD1Q9NUN5 540 aa26.38■■□□□ 1.81
TRIM3-201ENST00000345851 FER1L4A9Z1Z3 1794 aa26.38■■□□□ 1.81
TRIM3-201ENST00000345851 ZNF500O60304 480 aaPredicted RBP26.37■■□□□ 1.81
TRIM3-201ENST00000345851 DLC1Q96QB1 1528 aa26.37■■□□□ 1.81
TRIM3-201ENST00000345851 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
TRIM3-201ENST00000345851 USP32Q8NFA0 1604 aa26.37■■□□□ 1.81
TRIM3-201ENST00000345851 PRR36Q9H6K5 1346 aa26.36■■□□□ 1.81
TRIM3-201ENST00000345851 PODXL2Q9NZ53 605 aa26.36■■□□□ 1.81
TRIM3-201ENST00000345851 NSD2O96028 1365 aa26.36■■□□□ 1.81
TRIM3-201ENST00000345851 PRPF40AO75400 957 aaKnown RBP26.36■■□□□ 1.81
TRIM3-201ENST00000345851 HS1BP3Q53T59 392 aa26.36■■□□□ 1.81
TRIM3-201ENST00000345851 CHAMP1Q96JM3 812 aa26.36■■□□□ 1.81
TRIM3-201ENST00000345851 PDLIM2Q96JY6 352 aa26.35■■□□□ 1.81
TRIM3-201ENST00000345851 PRDM10Q9NQV6 1147 aa26.35■■□□□ 1.81
TRIM3-201ENST00000345851 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
TRIM3-201ENST00000345851 ZKSCAN5Q9Y2L8 839 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms