RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 SLC52A1Q9NWF4 448 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
SYDE1-201ENST00000342784 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 ZNF771Q7L3S4 317 aaPredicted RBP16.76■□□□□ 0.27
SYDE1-201ENST00000342784 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
SYDE1-201ENST00000342784 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 TRIM27P14373 513 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
SYDE1-201ENST00000342784 NUCB1Q02818 461 aa16.75■□□□□ 0.27
SYDE1-201ENST00000342784 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
SYDE1-201ENST00000342784 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
SYDE1-201ENST00000342784 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
SYDE1-201ENST00000342784 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
SYDE1-201ENST00000342784 NEO1Q92859 1461 aa16.74■□□□□ 0.27
SYDE1-201ENST00000342784 IGSF3O75054 1194 aa16.74■□□□□ 0.27
SYDE1-201ENST00000342784 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
SYDE1-201ENST00000342784 RABEP1Q15276 862 aa16.74■□□□□ 0.27
SYDE1-201ENST00000342784 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
SYDE1-201ENST00000342784 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
SYDE1-201ENST00000342784 TAF3Q5VWG9 929 aa16.73■□□□□ 0.27
SYDE1-201ENST00000342784 TSR2Q969E8 191 aaKnown RBP16.73■□□□□ 0.27
SYDE1-201ENST00000342784 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
SYDE1-201ENST00000342784 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 HDAC5Q9UQL6 1122 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
SYDE1-201ENST00000342784 TMEM57Q8N5G2 664 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 TSPY26PQ9H489 355 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 TMEM63CQ9P1W3 806 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
SYDE1-201ENST00000342784 ZNF710Q8N1W2 664 aa16.72■□□□□ 0.27
SYDE1-201ENST00000342784 PKP1Q13835 747 aa16.71■□□□□ 0.27
SYDE1-201ENST00000342784 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
SYDE1-201ENST00000342784 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
SYDE1-201ENST00000342784 MBD3O95983 291 aa16.71■□□□□ 0.27
SYDE1-201ENST00000342784 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.27
SYDE1-201ENST00000342784 IPO8O15397 1037 aaKnown RBP16.71■□□□□ 0.26
SYDE1-201ENST00000342784 CHMP4CQ96CF2 233 aa16.71■□□□□ 0.26
SYDE1-201ENST00000342784 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.26
SYDE1-201ENST00000342784 CWC22Q9HCG8 908 aaKnown RBP16.71■□□□□ 0.26
SYDE1-201ENST00000342784 NOB1Q9ULX3 412 aaKnown RBP16.71■□□□□ 0.26
SYDE1-201ENST00000342784 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
SYDE1-201ENST00000342784 CDC45O75419 566 aa16.7■□□□□ 0.26
SYDE1-201ENST00000342784 SYAP1Q96A49 352 aaPredicted RBP16.7■□□□□ 0.26
SYDE1-201ENST00000342784 CFAP74Q9C0B2 1584 aa16.7■□□□□ 0.26
SYDE1-201ENST00000342784 SSH1Q8WYL5 1049 aa16.7■□□□□ 0.26
SYDE1-201ENST00000342784 LAMC1P11047 1609 aa16.7■□□□□ 0.26
SYDE1-201ENST00000342784 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
SYDE1-201ENST00000342784 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
SYDE1-201ENST00000342784 POLR3AO14802 1390 aaPredicted RBP16.69■□□□□ 0.26
SYDE1-201ENST00000342784 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
SYDE1-201ENST00000342784 ST18O60284 1047 aa16.69■□□□□ 0.26
SYDE1-201ENST00000342784 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
SYDE1-201ENST00000342784 PIBF1Q8WXW3 757 aa16.68■□□□□ 0.26
SYDE1-201ENST00000342784 ZBTB9Q96C00 473 aa16.68■□□□□ 0.26
SYDE1-201ENST00000342784 BCL2L12Q9HB09 334 aa16.68■□□□□ 0.26
SYDE1-201ENST00000342784 SYNMO15061 1565 aa16.68■□□□□ 0.26
SYDE1-201ENST00000342784 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
SYDE1-201ENST00000342784 IRX5P78411 483 aaPredicted RBP16.68■□□□□ 0.26
SYDE1-201ENST00000342784 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
SYDE1-201ENST00000342784 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
SYDE1-201ENST00000342784 C17orf53Q8N3J3 647 aaPredicted RBP16.67■□□□□ 0.26
SYDE1-201ENST00000342784 APPP05067 770 aa16.66■□□□□ 0.26
SYDE1-201ENST00000342784 TTC12Q9H892 705 aaPredicted RBP16.66■□□□□ 0.26
SYDE1-201ENST00000342784 INO80Q9ULG1 1556 aaPredicted RBP16.66■□□□□ 0.26
SYDE1-201ENST00000342784 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
SYDE1-201ENST00000342784 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYDE1-201ENST00000342784 CARD14Q9BXL6 1004 aa16.66■□□□□ 0.26
SYDE1-201ENST00000342784 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
SYDE1-201ENST00000342784 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 GLI2P10070 1586 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 PHF14O94880 888 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 CCDC27Q2M243 656 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 PLA2R1Q13018 1463 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 PATL2C9JE40 543 aaKnown RBP16.65■□□□□ 0.26
SYDE1-201ENST00000342784 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
SYDE1-201ENST00000342784 KIF13AQ9H1H9 1805 aa16.65■□□□□ 0.26
SYDE1-201ENST00000342784 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
SYDE1-201ENST00000342784 TMEM132EQ6IEE7 984 aa16.64■□□□□ 0.25
SYDE1-201ENST00000342784 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
SYDE1-201ENST00000342784 HSP90B1P14625 803 aaKnown RBP16.64■□□□□ 0.25
SYDE1-201ENST00000342784 GCC1Q96CN9 775 aa16.64■□□□□ 0.25
SYDE1-201ENST00000342784 USP25Q9UHP3 1055 aa16.64■□□□□ 0.25
SYDE1-201ENST00000342784 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
SYDE1-201ENST00000342784 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
SYDE1-201ENST00000342784 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
SYDE1-201ENST00000342784 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
SYDE1-201ENST00000342784 MTHFSP49914 203 aa16.63■□□□□ 0.25
SYDE1-201ENST00000342784 TPRNQ4KMQ1 711 aa16.63■□□□□ 0.25
SYDE1-201ENST00000342784 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
SYDE1-201ENST00000342784 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
SYDE1-201ENST00000342784 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
SYDE1-201ENST00000342784 FAM193AP78312 1265 aa16.62■□□□□ 0.25
SYDE1-201ENST00000342784 C1orf115Q9H7X2 142 aa16.62■□□□□ 0.25
SYDE1-201ENST00000342784 MMP14P50281 582 aa16.62■□□□□ 0.25
SYDE1-201ENST00000342784 ABCA6Q8N139 1617 aa16.62■□□□□ 0.25
SYDE1-201ENST00000342784 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
SYDE1-201ENST00000342784 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
SYDE1-201ENST00000342784 STK26Q9P289 416 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms