RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 RBM42Q9BTD8 480 aaKnown RBP23.26■■□□□ 1.31
CDK13-202ENST00000340829 EXOC6BQ9Y2D4 811 aa23.26■■□□□ 1.31
CDK13-202ENST00000340829 NOL10Q9BSC4 688 aaKnown RBP23.25■■□□□ 1.31
CDK13-202ENST00000340829 TPM3P06753 285 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 FAM43AQ8N2R8 423 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 GNAT3A8MTJ3 354 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 WASLO00401 505 aaPredicted RBP23.25■■□□□ 1.31
CDK13-202ENST00000340829 ERICH2A1L162 156 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 ALDH1L2Q3SY69 923 aa23.25■■□□□ 1.31
CDK13-202ENST00000340829 TCOF1Q13428 1488 aaKnown RBP23.24■■□□□ 1.31
CDK13-202ENST00000340829 HIP1O00291 1037 aa23.24■■□□□ 1.31
CDK13-202ENST00000340829 AMOTL1Q8IY63 956 aa23.24■■□□□ 1.31
CDK13-202ENST00000340829 CABP4P57796 275 aa23.23■■□□□ 1.31
CDK13-202ENST00000340829 TRIM27P14373 513 aa23.23■■□□□ 1.31
CDK13-202ENST00000340829 MBD3O95983 291 aa23.23■■□□□ 1.31
CDK13-202ENST00000340829 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
CDK13-202ENST00000340829 FIBPO43427 364 aa23.23■■□□□ 1.31
CDK13-202ENST00000340829 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
CDK13-202ENST00000340829 PRAG1Q86YV5 1406 aa23.22■■□□□ 1.31
CDK13-202ENST00000340829 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
CDK13-202ENST00000340829 RAD21O60216 631 aa23.21■■□□□ 1.31
CDK13-202ENST00000340829 DDX54Q8TDD1 881 aaKnown RBP23.21■■□□□ 1.31
CDK13-202ENST00000340829 PLCH2O75038 1416 aa23.21■■□□□ 1.31
CDK13-202ENST00000340829 KDM4AO75164 1064 aa23.21■■□□□ 1.31
CDK13-202ENST00000340829 ZC3H6P61129 1189 aaKnown RBP23.21■■□□□ 1.31
CDK13-202ENST00000340829 SMARCA5O60264 1052 aaPredicted RBP23.21■■□□□ 1.31
CDK13-202ENST00000340829 FYB1O15117 783 aa23.2■■□□□ 1.31
CDK13-202ENST00000340829 TOM1L2Q6ZVM7 507 aa23.2■■□□□ 1.31
CDK13-202ENST00000340829 POGZQ7Z3K3 1410 aa23.2■■□□□ 1.3
CDK13-202ENST00000340829 ITSN2Q9NZM3 1697 aa23.2■■□□□ 1.3
CDK13-202ENST00000340829 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
CDK13-202ENST00000340829 DENND4BO75064 1496 aaPredicted RBP23.2■■□□□ 1.3
CDK13-202ENST00000340829 AACSQ86V21 672 aa23.19■■□□□ 1.3
CDK13-202ENST00000340829 CWC22Q9HCG8 908 aaKnown RBP23.19■■□□□ 1.3
CDK13-202ENST00000340829 USHBP1Q8N6Y0 703 aa23.19■■□□□ 1.3
CDK13-202ENST00000340829 FBLN1P23142 703 aa23.19■■□□□ 1.3
CDK13-202ENST00000340829 KIF6Q6ZMV9 814 aa23.19■■□□□ 1.3
CDK13-202ENST00000340829 SAFBQ15424 915 aaKnown RBP eCLIP23.19■■□□□ 1.3
CDK13-202ENST00000340829 CYP46A1Q9Y6A2 500 aa23.19■■□□□ 1.3
CDK13-202ENST00000340829 CCAR2Q8N163 923 aaKnown RBP23.18■■□□□ 1.3
CDK13-202ENST00000340829 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
CDK13-202ENST00000340829 MCM4P33991 863 aa23.18■■□□□ 1.3
CDK13-202ENST00000340829 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
CDK13-202ENST00000340829 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
CDK13-202ENST00000340829 WDR62O43379 1518 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 F6X3S4 739 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 PDCP20941 246 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 TSR1Q2NL82 804 aaKnown RBP23.17■■□□□ 1.3
CDK13-202ENST00000340829 NOC3LQ8WTT2 800 aaKnown RBP23.17■■□□□ 1.3
CDK13-202ENST00000340829 IGHDP01880 384 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
CDK13-202ENST00000340829 NSD2O96028 1365 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 CEBPAP49715 358 aaPredicted RBP23.17■■□□□ 1.3
CDK13-202ENST00000340829 KIAA0556O60303 1618 aa23.17■■□□□ 1.3
CDK13-202ENST00000340829 TPM1P09493 284 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 SDF4Q9BRK5 362 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 DUOX2Q9NRD8 1548 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 STK3Q13188 491 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
CDK13-202ENST00000340829 AMOTL2Q9Y2J4 779 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 TBC1D2BQ9UPU7 963 aa23.16■■□□□ 1.3
CDK13-202ENST00000340829 FAM13BQ9NYF5 915 aa23.15■■□□□ 1.3
CDK13-202ENST00000340829 HOOK1Q9UJC3 728 aaKnown RBP23.15■■□□□ 1.3
CDK13-202ENST00000340829 PARD3Q8TEW0 1356 aa23.15■■□□□ 1.3
CDK13-202ENST00000340829 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
CDK13-202ENST00000340829 RBM33Q96EV2 1170 aaKnown RBP23.14■■□□□ 1.29
CDK13-202ENST00000340829 TESK2Q96S53 571 aa23.14■■□□□ 1.29
CDK13-202ENST00000340829 PRDM11Q9NQV5 511 aa23.14■■□□□ 1.29
CDK13-202ENST00000340829 TSPY26PQ9H489 355 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 CNNM1Q9NRU3 951 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 CEBPZQ03701 1054 aaKnown RBP23.13■■□□□ 1.29
CDK13-202ENST00000340829 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 TTC39AQ5SRH9 613 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 TRAPPC8Q9Y2L5 1435 aa23.13■■□□□ 1.29
CDK13-202ENST00000340829 KCNH5Q8NCM2 988 aa23.12■■□□□ 1.29
CDK13-202ENST00000340829 CCDC39Q9UFE4 941 aa23.12■■□□□ 1.29
CDK13-202ENST00000340829 CIZ1Q9ULV3 898 aaPredicted RBP23.12■■□□□ 1.29
CDK13-202ENST00000340829 HOMER1Q86YM7 354 aa23.12■■□□□ 1.29
CDK13-202ENST00000340829 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
CDK13-202ENST00000340829 TAF7Q15545 349 aaPredicted RBP23.11■■□□□ 1.29
CDK13-202ENST00000340829 WDR33Q9C0J8 1336 aaKnown RBP23.11■■□□□ 1.29
CDK13-202ENST00000340829 MX1P20591 662 aa23.11■■□□□ 1.29
CDK13-202ENST00000340829 NUP160Q12769 1436 aa23.1■■□□□ 1.29
CDK13-202ENST00000340829 JAKMIP1Q96N16 626 aaKnown RBP23.1■■□□□ 1.29
CDK13-202ENST00000340829 MBIPQ9NS73 344 aa23.1■■□□□ 1.29
CDK13-202ENST00000340829 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
CDK13-202ENST00000340829 TPM2P07951 284 aa23.09■■□□□ 1.29
CDK13-202ENST00000340829 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
CDK13-202ENST00000340829 R3HCC1Q9Y3T6 440 aaKnown RBP23.09■■□□□ 1.29
CDK13-202ENST00000340829 LETM1O95202 739 aaPredicted RBP23.08■■□□□ 1.29
CDK13-202ENST00000340829 ATP2B1P20020 1258 aa23.08■■□□□ 1.29
CDK13-202ENST00000340829 PCMTD1Q96MG8 357 aaPredicted RBP23.08■■□□□ 1.29
CDK13-202ENST00000340829 TRIM34Q9BYJ4 488 aa23.08■■□□□ 1.29
CDK13-202ENST00000340829 PDE4CQ08493 712 aa23.08■■□□□ 1.29
CDK13-202ENST00000340829 RRP12Q5JTH9 1297 aaKnown RBP23.08■■□□□ 1.29
CDK13-202ENST00000340829 GRPEL1Q9HAV7 217 aa23.08■■□□□ 1.29
CDK13-202ENST00000340829 GOLGA6L1Q8N7Z2 621 aa23.08■■□□□ 1.28
CDK13-202ENST00000340829 MTMR7Q9Y216 660 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms