RNA–Protein interactions for RNA: ENST00000339697.4

SERINC1-201, Transcript of serine incorporator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERINC1, Length 3,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERINC1-201ENST00000339697 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
SERINC1-201ENST00000339697 KDM3BQ7LBC6 1761 aa13.29□□□□□ -0.28
SERINC1-201ENST00000339697 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
SERINC1-201ENST00000339697 ABCA3Q99758 1704 aa13.29□□□□□ -0.28
SERINC1-201ENST00000339697 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
SERINC1-201ENST00000339697 APAF1O14727 1248 aa13.28□□□□□ -0.28
SERINC1-201ENST00000339697 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
SERINC1-201ENST00000339697 KDM2BQ8NHM5 1336 aa13.28□□□□□ -0.28
SERINC1-201ENST00000339697 SBNO1A3KN83 1393 aa13.27□□□□□ -0.28
SERINC1-201ENST00000339697 ACEP12821 1306 aa13.27□□□□□ -0.29
SERINC1-201ENST00000339697 PARP4Q9UKK3 1724 aaKnown RBP13.27□□□□□ -0.29
SERINC1-201ENST00000339697 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
SERINC1-201ENST00000339697 TCP11L2Q8N4U5 519 aa13.26□□□□□ -0.29
SERINC1-201ENST00000339697 GGNBP2Q9H3C7 697 aa13.26□□□□□ -0.29
SERINC1-201ENST00000339697 DMRT2Q9Y5R5 561 aa13.26□□□□□ -0.29
SERINC1-201ENST00000339697 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
SERINC1-201ENST00000339697 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
SERINC1-201ENST00000339697 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
SERINC1-201ENST00000339697 NHSL1Q5SYE7 1610 aa13.25□□□□□ -0.29
SERINC1-201ENST00000339697 DIAPH1O60610 1272 aaKnown RBP13.24□□□□□ -0.29
SERINC1-201ENST00000339697 TNNT2P45379 298 aaPredicted RBP13.24□□□□□ -0.29
SERINC1-201ENST00000339697 PKD1L3Q7Z443 1732 aa13.24□□□□□ -0.29
SERINC1-201ENST00000339697 KCNA6P17658 529 aa13.24□□□□□ -0.29
SERINC1-201ENST00000339697 OVOS2A0A0G2JMS6 1433 aa13.24□□□□□ -0.29
SERINC1-201ENST00000339697 ZNF428Q96B54 188 aa13.24□□□□□ -0.29
SERINC1-201ENST00000339697 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
SERINC1-201ENST00000339697 PLPPR3Q6T4P5 718 aa13.23□□□□□ -0.29
SERINC1-201ENST00000339697 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
SERINC1-201ENST00000339697 NME9Q86XW9 330 aa13.22□□□□□ -0.29
SERINC1-201ENST00000339697 FLT4P35916 1363 aa13.22□□□□□ -0.29
SERINC1-201ENST00000339697 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
SERINC1-201ENST00000339697 USP19O94966 1318 aa13.21□□□□□ -0.3
SERINC1-201ENST00000339697 COG3Q96JB2 828 aa13.2□□□□□ -0.3
SERINC1-201ENST00000339697 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
SERINC1-201ENST00000339697 PXDNQ92626 1479 aa13.2□□□□□ -0.3
SERINC1-201ENST00000339697 IGSF1Q8N6C5 1336 aa13.2□□□□□ -0.3
SERINC1-201ENST00000339697 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
SERINC1-201ENST00000339697 PLIN1O60240 522 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 CRB1P82279 1406 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
SERINC1-201ENST00000339697 MYH16Q9H6N6 1097 aa13.19□□□□□ -0.3
SERINC1-201ENST00000339697 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
SERINC1-201ENST00000339697 RGPD5Q99666 1765 aa13.18□□□□□ -0.3
SERINC1-201ENST00000339697 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
SERINC1-201ENST00000339697 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
SERINC1-201ENST00000339697 COL22A1Q8NFW1 1626 aaPredicted RBP13.17□□□□□ -0.3
SERINC1-201ENST00000339697 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
SERINC1-201ENST00000339697 ALDH1L2Q3SY69 923 aa13.17□□□□□ -0.3
SERINC1-201ENST00000339697 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
SERINC1-201ENST00000339697 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
SERINC1-201ENST00000339697 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
SERINC1-201ENST00000339697 IPO9Q96P70 1041 aaKnown RBP13.16□□□□□ -0.3
SERINC1-201ENST00000339697 IFT57Q9NWB7 429 aa13.15□□□□□ -0.3
SERINC1-201ENST00000339697 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
SERINC1-201ENST00000339697 MS4A1P11836 297 aa13.15□□□□□ -0.3
SERINC1-201ENST00000339697 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.31
SERINC1-201ENST00000339697 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.313e-6■■■■□ 25.9
SERINC1-201ENST00000339697 PDE4CQ08493 712 aa13.15□□□□□ -0.31
SERINC1-201ENST00000339697 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.31
SERINC1-201ENST00000339697 NEFMP07197 916 aa13.14□□□□□ -0.31
SERINC1-201ENST00000339697 EIF4A2Q14240 407 aaKnown RBP13.14□□□□□ -0.31
SERINC1-201ENST00000339697 WNK3Q9BYP7 1800 aa13.14□□□□□ -0.31
SERINC1-201ENST00000339697 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
SERINC1-201ENST00000339697 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
SERINC1-201ENST00000339697 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
SERINC1-201ENST00000339697 PLCH1Q4KWH8 1693 aa13.14□□□□□ -0.31
SERINC1-201ENST00000339697 MRC1P22897 1456 aa13.13□□□□□ -0.31
SERINC1-201ENST00000339697 CALD1Q05682 793 aaKnown RBP13.13□□□□□ -0.31
SERINC1-201ENST00000339697 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
SERINC1-201ENST00000339697 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
SERINC1-201ENST00000339697 SOS1Q07889 1333 aaPredicted RBP13.13□□□□□ -0.31
SERINC1-201ENST00000339697 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
SERINC1-201ENST00000339697 USP35Q9P2H5 1018 aa13.13□□□□□ -0.31
SERINC1-201ENST00000339697 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 BABAM1Q9NWV8 329 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 FGD1P98174 961 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 MAP3K19Q56UN5 1328 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 GLI3P10071 1580 aa13.12□□□□□ -0.31
SERINC1-201ENST00000339697 CRBNQ96SW2 442 aa13.11□□□□□ -0.31
SERINC1-201ENST00000339697 RGS12O14924 1447 aa13.11□□□□□ -0.31
SERINC1-201ENST00000339697 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
SERINC1-201ENST00000339697 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
SERINC1-201ENST00000339697 UBR2Q8IWV8 1755 aa13.1□□□□□ -0.31
SERINC1-201ENST00000339697 RBM10P98175 930 aaKnown RBP13.1□□□□□ -0.31
SERINC1-201ENST00000339697 CENPQQ7L2Z9 268 aaPredicted RBP13.1□□□□□ -0.31
SERINC1-201ENST00000339697 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
SERINC1-201ENST00000339697 PXDNLA1KZ92 1463 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 MSH6P52701 1360 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 CEMIPQ8WUJ3 1361 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 PRKAR2BP31323 418 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
SERINC1-201ENST00000339697 TCERG1O14776 1098 aaKnown RBP13.08□□□□□ -0.32
SERINC1-201ENST00000339697 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms