RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 EXOC5O00471 708 aa20.24■□□□□ 0.83
COMMD4-202ENST00000338995 SOX12O15370 315 aa20.24■□□□□ 0.83
COMMD4-202ENST00000338995 CARD10Q9BWT7 1032 aa20.24■□□□□ 0.83
COMMD4-202ENST00000338995 AXIN2Q9Y2T1 843 aa20.24■□□□□ 0.83
COMMD4-202ENST00000338995 KCNQ2O43526 872 aa20.23■□□□□ 0.83
COMMD4-202ENST00000338995 SLIT3O75094 1523 aa20.21■□□□□ 0.83
COMMD4-202ENST00000338995 KTN1Q86UP2 1357 aaKnown RBP20.21■□□□□ 0.83
COMMD4-202ENST00000338995 PARP4Q9UKK3 1724 aaKnown RBP20.2■□□□□ 0.82
COMMD4-202ENST00000338995 MARCH10Q8NA82 808 aaPredicted RBP20.19■□□□□ 0.82
COMMD4-202ENST00000338995 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
COMMD4-202ENST00000338995 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
COMMD4-202ENST00000338995 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
COMMD4-202ENST00000338995 TMC1Q8TDI8 760 aa20.17■□□□□ 0.82
COMMD4-202ENST00000338995 CARD11Q9BXL7 1154 aa20.17■□□□□ 0.82
COMMD4-202ENST00000338995 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
COMMD4-202ENST00000338995 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
COMMD4-202ENST00000338995 BCL9O00512 1426 aa20.15■□□□□ 0.82
COMMD4-202ENST00000338995 RREB1Q92766 1687 aa20.14■□□□□ 0.81
COMMD4-202ENST00000338995 TERF2IPQ9NYB0 399 aa20.14■□□□□ 0.81
COMMD4-202ENST00000338995 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
COMMD4-202ENST00000338995 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
COMMD4-202ENST00000338995 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
COMMD4-202ENST00000338995 SLC24A1O60721 1099 aa20.12■□□□□ 0.81
COMMD4-202ENST00000338995 YY1P25490 414 aa20.12■□□□□ 0.81
COMMD4-202ENST00000338995 COL18A1P39060 1754 aa20.12■□□□□ 0.81
COMMD4-202ENST00000338995 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
COMMD4-202ENST00000338995 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
COMMD4-202ENST00000338995 TXNRD1Q16881 649 aa20.11■□□□□ 0.81
COMMD4-202ENST00000338995 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
COMMD4-202ENST00000338995 PTF1AQ7RTS3 328 aa20.1■□□□□ 0.81
COMMD4-202ENST00000338995 PROM2Q8N271 834 aa20.1■□□□□ 0.81
COMMD4-202ENST00000338995 PUS7Q96PZ0 661 aaKnown RBP20.1■□□□□ 0.81
COMMD4-202ENST00000338995 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
COMMD4-202ENST00000338995 IL2RBP14784 551 aa20.09■□□□□ 0.81
COMMD4-202ENST00000338995 NME9Q86XW9 330 aa20.09■□□□□ 0.81
COMMD4-202ENST00000338995 SLC12A5Q9H2X9 1139 aa20.09■□□□□ 0.81
COMMD4-202ENST00000338995 PEAK1Q9H792 1746 aa20.08■□□□□ 0.81
COMMD4-202ENST00000338995 LRRC37A3O60309 1634 aa20.08■□□□□ 0.8
COMMD4-202ENST00000338995 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
COMMD4-202ENST00000338995 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
COMMD4-202ENST00000338995 ANO8Q9HCE9 1232 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-202ENST00000338995 AKAP12Q02952 1782 aa20.07■□□□□ 0.8
COMMD4-202ENST00000338995 ANKRD24Q8TF21 1146 aa20.06■□□□□ 0.8
COMMD4-202ENST00000338995 ABCC6O95255 1503 aa20.06■□□□□ 0.8
COMMD4-202ENST00000338995 TONSLQ96HA7 1378 aa20.06■□□□□ 0.8
COMMD4-202ENST00000338995 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-202ENST00000338995 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
COMMD4-202ENST00000338995 ERBB3P21860 1342 aa20.05■□□□□ 0.8
COMMD4-202ENST00000338995 ZBTB7AO95365 584 aa20.05■□□□□ 0.8
COMMD4-202ENST00000338995 NFAT5O94916 1531 aa20.04■□□□□ 0.8
COMMD4-202ENST00000338995 ATF5Q9Y2D1 282 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-202ENST00000338995 RGPD5Q99666 1765 aa20.03■□□□□ 0.8
COMMD4-202ENST00000338995 ACSBG1Q96GR2 724 aa20.03■□□□□ 0.8
COMMD4-202ENST00000338995 TNS2Q63HR2 1409 aa20.02■□□□□ 0.8
COMMD4-202ENST00000338995 EDC4Q6P2E9 1401 aaKnown RBP20.02■□□□□ 0.8
COMMD4-202ENST00000338995 IP6K1Q92551 441 aa20.01■□□□□ 0.79
COMMD4-202ENST00000338995 MTFR1LQ9H019 292 aa20.01■□□□□ 0.79
COMMD4-202ENST00000338995 KAT6BQ8WYB5 2073 aa20■□□□□ 0.79
COMMD4-202ENST00000338995 COG3Q96JB2 828 aa20■□□□□ 0.79
COMMD4-202ENST00000338995 PDGFDQ9GZP0 370 aaPredicted RBP20■□□□□ 0.79
COMMD4-202ENST00000338995 WNK3Q9BYP7 1800 aa19.98■□□□□ 0.79
COMMD4-202ENST00000338995 DDX54Q8TDD1 881 aaKnown RBP19.98■□□□□ 0.79
COMMD4-202ENST00000338995 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-202ENST00000338995 MON2Q7Z3U7 1717 aa19.98■□□□□ 0.79
COMMD4-202ENST00000338995 PTGER2P43116 358 aa19.97■□□□□ 0.79
COMMD4-202ENST00000338995 AMPHP49418 695 aa19.97■□□□□ 0.79
COMMD4-202ENST00000338995 CD163L1Q9NR16 1453 aa19.97■□□□□ 0.79
COMMD4-202ENST00000338995 A0A1W2PP64 1363 aa19.95■□□□□ 0.79
COMMD4-202ENST00000338995 ST20-MTHFSA0A0A6YYL1 179 aa19.95■□□□□ 0.78
COMMD4-202ENST00000338995 SLC27A3Q5K4L6 730 aa19.95■□□□□ 0.78
COMMD4-202ENST00000338995 SYT17Q9BSW7 474 aa19.95■□□□□ 0.78
COMMD4-202ENST00000338995 FHDC1Q9C0D6 1143 aaPredicted RBP19.94■□□□□ 0.78
COMMD4-202ENST00000338995 ARXQ96QS3 562 aa19.93■□□□□ 0.78
COMMD4-202ENST00000338995 SLC16A10Q8TF71 515 aa19.92■□□□□ 0.78
COMMD4-202ENST00000338995 CASZ1Q86V15 1759 aa19.91■□□□□ 0.78
COMMD4-202ENST00000338995 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
COMMD4-202ENST00000338995 ZCRB1Q8TBF4 217 aaKnown RBP19.91■□□□□ 0.78
COMMD4-202ENST00000338995 SYTL4Q96C24 671 aaPredicted RBP19.91■□□□□ 0.78
COMMD4-202ENST00000338995 TESK2Q96S53 571 aa19.91■□□□□ 0.78
COMMD4-202ENST00000338995 USP54Q70EL1 1684 aa19.91■□□□□ 0.78
COMMD4-202ENST00000338995 HOXC9P31274 260 aa19.9■□□□□ 0.78
COMMD4-202ENST00000338995 TMF1P82094 1093 aa19.9■□□□□ 0.78
COMMD4-202ENST00000338995 LTN1O94822 1766 aa19.9■□□□□ 0.78
COMMD4-202ENST00000338995 PRIM1P49642 420 aaKnown RBP19.89■□□□□ 0.77
COMMD4-202ENST00000338995 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
COMMD4-202ENST00000338995 MAP3K19Q56UN5 1328 aa19.89■□□□□ 0.77
COMMD4-202ENST00000338995 NHSQ6T4R5 1651 aa19.89■□□□□ 0.77
COMMD4-202ENST00000338995 POLD1P28340 1107 aa19.88■□□□□ 0.77
COMMD4-202ENST00000338995 SGIP1Q9BQI5 828 aa19.88■□□□□ 0.77
COMMD4-202ENST00000338995 LRRC4BQ9NT99 713 aa19.88■□□□□ 0.77
COMMD4-202ENST00000338995 TFCP2L1Q9NZI6 479 aa19.88■□□□□ 0.77
COMMD4-202ENST00000338995 CGNL1Q0VF96 1302 aa19.86■□□□□ 0.77
COMMD4-202ENST00000338995 ZNF827Q17R98 1081 aa19.85■□□□□ 0.77
COMMD4-202ENST00000338995 RAPGEF4Q8WZA2 1011 aa19.85■□□□□ 0.77
COMMD4-202ENST00000338995 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
COMMD4-202ENST00000338995 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
COMMD4-202ENST00000338995 FYB1O15117 783 aa19.83■□□□□ 0.77
COMMD4-202ENST00000338995 FBLN1P23142 703 aa19.83■□□□□ 0.77
COMMD4-202ENST00000338995 GPR162Q16538 588 aa19.83■□□□□ 0.77
COMMD4-202ENST00000338995 BTAF1O14981 1849 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms