RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 NSD3Q9BZ95 1437 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 CGNL1Q0VF96 1302 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 TOM1L2Q6ZVM7 507 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 TCP11L2Q8N4U5 519 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 CARD14Q9BXL6 1004 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 GGNBP2Q9H3C7 697 aa15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
SLC28A1-202ENST00000338602 LMO7Q8WWI1 1683 aa15.58■□□□□ 0.09
SLC28A1-202ENST00000338602 NFAT5O94916 1531 aa15.58■□□□□ 0.09
SLC28A1-202ENST00000338602 COL5A2P05997 1499 aaPredicted RBP15.58■□□□□ 0.08
SLC28A1-202ENST00000338602 MYOM1P52179 1685 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 WDR17Q8IZU2 1322 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 PANK3Q9H999 370 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 AXIN2Q9Y2T1 843 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 ABCC6O95255 1503 aa15.57■□□□□ 0.08
SLC28A1-202ENST00000338602 CRB1P82279 1406 aa15.56■□□□□ 0.08
SLC28A1-202ENST00000338602 C11orf95C9JLR9 678 aaPredicted RBP15.56■□□□□ 0.08
SLC28A1-202ENST00000338602 AMPHP49418 695 aa15.56■□□□□ 0.08
SLC28A1-202ENST00000338602 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
SLC28A1-202ENST00000338602 IP6K1Q92551 441 aa15.55■□□□□ 0.08
SLC28A1-202ENST00000338602 CARD10Q9BWT7 1032 aa15.54■□□□□ 0.08
SLC28A1-202ENST00000338602 KNSTRNQ9Y448 316 aa15.54■□□□□ 0.08
SLC28A1-202ENST00000338602 COL18A1P39060 1754 aa15.53■□□□□ 0.08
SLC28A1-202ENST00000338602 CDCA7Q9BWT1 371 aaPredicted RBP15.53■□□□□ 0.08
SLC28A1-202ENST00000338602 BLMP54132 1417 aaPredicted RBP15.53■□□□□ 0.08
SLC28A1-202ENST00000338602 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
SLC28A1-202ENST00000338602 PDE3BQ13370 1112 aa15.52■□□□□ 0.08
SLC28A1-202ENST00000338602 ANKRD24Q8TF21 1146 aa15.52■□□□□ 0.08
SLC28A1-202ENST00000338602 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
SLC28A1-202ENST00000338602 EP400Q96L91 3159 aa15.52■□□□□ 0.08
SLC28A1-202ENST00000338602 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
SLC28A1-202ENST00000338602 CCDC7Q96M83 1385 aa15.51■□□□□ 0.07
SLC28A1-202ENST00000338602 ERBB3P21860 1342 aa15.51■□□□□ 0.07
SLC28A1-202ENST00000338602 LTN1O94822 1766 aa15.51■□□□□ 0.07
SLC28A1-202ENST00000338602 RTL1A6NKG5 1358 aa15.5■□□□□ 0.07
SLC28A1-202ENST00000338602 NSD2O96028 1365 aa15.5■□□□□ 0.07
SLC28A1-202ENST00000338602 HOXC9P31274 260 aa15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 RRS1Q15050 365 aaKnown RBP15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 KIF24Q5T7B8 1368 aa15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 FBLN1P23142 703 aa15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 ZEB1P37275 1124 aaPredicted RBP15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
SLC28A1-202ENST00000338602 THSD7AQ9UPZ6 1657 aa15.48■□□□□ 0.07
SLC28A1-202ENST00000338602 BRWD3Q6RI45 1802 aa15.48■□□□□ 0.07
SLC28A1-202ENST00000338602 DDB1Q16531 1140 aa15.48■□□□□ 0.07
SLC28A1-202ENST00000338602 SMG6Q86US8 1419 aaKnown RBP15.47■□□□□ 0.07
SLC28A1-202ENST00000338602 RGPD5Q99666 1765 aa15.47■□□□□ 0.07
SLC28A1-202ENST00000338602 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
SLC28A1-202ENST00000338602 MORC1Q86VD1 984 aa15.47■□□□□ 0.07
SLC28A1-202ENST00000338602 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
SLC28A1-202ENST00000338602 LRP5O75197 1615 aa15.46■□□□□ 0.07
SLC28A1-202ENST00000338602 FLT4P35916 1363 aa15.46■□□□□ 0.07
SLC28A1-202ENST00000338602 EXOC5O00471 708 aa15.46■□□□□ 0.07
SLC28A1-202ENST00000338602 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.07
SLC28A1-202ENST00000338602 TNNT2P45379 298 aaPredicted RBP15.45■□□□□ 0.06
SLC28A1-202ENST00000338602 INSRP06213 1382 aa15.44■□□□□ 0.06
SLC28A1-202ENST00000338602 IL2RBP14784 551 aa15.44■□□□□ 0.06
SLC28A1-202ENST00000338602 HSP90AB2PQ58FF8 381 aa15.43■□□□□ 0.06
SLC28A1-202ENST00000338602 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
SLC28A1-202ENST00000338602 EMILIN1Q9Y6C2 1016 aa15.43■□□□□ 0.06
SLC28A1-202ENST00000338602 PARP4Q9UKK3 1724 aaKnown RBP15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 DEFB132Q7Z7B7 95 aa15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 ANKRD26Q9UPS8 1709 aa15.41■□□□□ 0.06
SLC28A1-202ENST00000338602 PER1O15534 1290 aaPredicted RBP15.4■□□□□ 0.06
SLC28A1-202ENST00000338602 YY1P25490 414 aa15.4■□□□□ 0.06
SLC28A1-202ENST00000338602 BAG6P46379 1132 aa15.4■□□□□ 0.06
SLC28A1-202ENST00000338602 DISP2A7MBM2 1401 aa15.4■□□□□ 0.06
SLC28A1-202ENST00000338602 RAPGEF4Q8WZA2 1011 aa15.39■□□□□ 0.05
SLC28A1-202ENST00000338602 OVOS2A0A0G2JMS6 1433 aa15.39■□□□□ 0.05
SLC28A1-202ENST00000338602 TRIM37O94972 964 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 CC2D1BQ5T0F9 858 aaKnown RBP15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 MAP2P11137 1827 aaKnown RBP15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 WNK3Q9BYP7 1800 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 LRRC37A3O60309 1634 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 TNS2Q63HR2 1409 aa15.37■□□□□ 0.05
SLC28A1-202ENST00000338602 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
SLC28A1-202ENST00000338602 MARCH10Q8NA82 808 aaPredicted RBP15.36■□□□□ 0.05
SLC28A1-202ENST00000338602 PSDA5PKW4 1024 aaPredicted RBP15.36■□□□□ 0.05
SLC28A1-202ENST00000338602 PEAK1Q9H792 1746 aa15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 APBA3O96018 575 aa15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 IFFO2Q5TF58 517 aa15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 USHBP1Q8N6Y0 703 aa15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 ZCRB1Q8TBF4 217 aaKnown RBP15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 RGPD1P0DJD0 1748 aa15.35■□□□□ 0.05
SLC28A1-202ENST00000338602 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
SLC28A1-202ENST00000338602 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
SLC28A1-202ENST00000338602 BCL9O00512 1426 aa15.33■□□□□ 0.04
SLC28A1-202ENST00000338602 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
SLC28A1-202ENST00000338602 EYA1Q99502 592 aa15.32■□□□□ 0.04
SLC28A1-202ENST00000338602 BCL11BQ9C0K0 894 aaPredicted RBP15.32■□□□□ 0.04
SLC28A1-202ENST00000338602 MTHFSP49914 203 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms