RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 USP54Q70EL1 1684 aa22.8■■□□□ 1.24
MUC1-201ENST00000337604 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
MUC1-201ENST00000337604 PARD3Q8TEW0 1356 aa22.79■■□□□ 1.24
MUC1-201ENST00000337604 ARHGEF25Q86VW2 580 aa22.79■■□□□ 1.24
MUC1-201ENST00000337604 CARD11Q9BXL7 1154 aa22.78■■□□□ 1.24
MUC1-201ENST00000337604 WDR17Q8IZU2 1322 aa22.78■■□□□ 1.24
MUC1-201ENST00000337604 SOX12O15370 315 aa22.77■■□□□ 1.24
MUC1-201ENST00000337604 SBF2Q86WG5 1849 aa22.77■■□□□ 1.24
MUC1-201ENST00000337604 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
MUC1-201ENST00000337604 OVOS2A0A0J9YW53 1432 aa22.76■■□□□ 1.23
MUC1-201ENST00000337604 OVOS2Q6IE36 1432 aa22.76■■□□□ 1.23
MUC1-201ENST00000337604 TOM1L2Q6ZVM7 507 aa22.76■■□□□ 1.23
MUC1-201ENST00000337604 KCNH5Q8NCM2 988 aa22.75■■□□□ 1.23
MUC1-201ENST00000337604 ABCC6O95255 1503 aa22.75■■□□□ 1.23
MUC1-201ENST00000337604 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
MUC1-201ENST00000337604 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
MUC1-201ENST00000337604 RGPD3A6NKT7 1758 aaPredicted RBP22.72■■□□□ 1.23
MUC1-201ENST00000337604 RGPD4Q7Z3J3 1758 aa22.72■■□□□ 1.23
MUC1-201ENST00000337604 DDB1Q16531 1140 aa22.71■■□□□ 1.23
MUC1-201ENST00000337604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.71■■□□□ 1.23
MUC1-201ENST00000337604 NME9Q86XW9 330 aa22.7■■□□□ 1.22
MUC1-201ENST00000337604 LTN1O94822 1766 aa22.69■■□□□ 1.22
MUC1-201ENST00000337604 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
MUC1-201ENST00000337604 PTF1AQ7RTS3 328 aa22.68■■□□□ 1.22
MUC1-201ENST00000337604 CARD10Q9BWT7 1032 aa22.68■■□□□ 1.22
MUC1-201ENST00000337604 SLC12A5Q9H2X9 1139 aa22.68■■□□□ 1.22
MUC1-201ENST00000337604 BCL9O00512 1426 aa22.67■■□□□ 1.22
MUC1-201ENST00000337604 EDC4Q6P2E9 1401 aaKnown RBP22.67■■□□□ 1.22
MUC1-201ENST00000337604 C11orf95C9JLR9 678 aaPredicted RBP22.67■■□□□ 1.22
MUC1-201ENST00000337604 MARCH10Q8NA82 808 aaPredicted RBP22.67■■□□□ 1.22
MUC1-201ENST00000337604 CSB-PGBD3P0DP91 1061 aa22.66■■□□□ 1.22
MUC1-201ENST00000337604 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
MUC1-201ENST00000337604 TESK2Q96S53 571 aa22.65■■□□□ 1.22
MUC1-201ENST00000337604 CDCA7Q9BWT1 371 aaPredicted RBP22.65■■□□□ 1.22
MUC1-201ENST00000337604 TNS2Q63HR2 1409 aa22.65■■□□□ 1.22
MUC1-201ENST00000337604 CCDC7Q96M83 1385 aa22.64■■□□□ 1.22
MUC1-201ENST00000337604 ERBB3P21860 1342 aa22.64■■□□□ 1.22
MUC1-201ENST00000337604 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
MUC1-201ENST00000337604 PLSCR1O15162 318 aa22.61■■□□□ 1.21
MUC1-201ENST00000337604 PUS7Q96PZ0 661 aaKnown RBP22.61■■□□□ 1.21
MUC1-201ENST00000337604 BCL11BQ9C0K0 894 aaPredicted RBP22.61■■□□□ 1.21
MUC1-201ENST00000337604 NBPF14Q5TI25 921 aa22.6■■□□□ 1.21
MUC1-201ENST00000337604 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
MUC1-201ENST00000337604 ST20-MTHFSA0A0A6YYL1 179 aa22.59■■□□□ 1.21
MUC1-201ENST00000337604 TERF2IPQ9NYB0 399 aa22.59■■□□□ 1.21
MUC1-201ENST00000337604 NHSQ6T4R5 1651 aa22.58■■□□□ 1.2
MUC1-201ENST00000337604 NINLQ9Y2I6 1382 aa22.57■■□□□ 1.2
MUC1-201ENST00000337604 CASZ1Q86V15 1759 aa22.57■■□□□ 1.2
MUC1-201ENST00000337604 EXOC5O00471 708 aa22.56■■□□□ 1.2
MUC1-201ENST00000337604 PROM2Q8N271 834 aa22.56■■□□□ 1.2
MUC1-201ENST00000337604 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
MUC1-201ENST00000337604 NLRP2Q9NX02 1062 aa22.55■■□□□ 1.2
MUC1-201ENST00000337604 FAM208AQ9UK61 1670 aaKnown RBP22.52■■□□□ 1.2
MUC1-201ENST00000337604 KCNQ2O43526 872 aa22.52■■□□□ 1.2
MUC1-201ENST00000337604 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
MUC1-201ENST00000337604 IL2RBP14784 551 aa22.51■■□□□ 1.19
MUC1-201ENST00000337604 ANKRD36BQ8N2N9 1353 aa22.5■■□□□ 1.19
MUC1-201ENST00000337604 USP47Q96K76 1375 aa22.5■■□□□ 1.19
MUC1-201ENST00000337604 TXNRD1Q16881 649 aa22.49■■□□□ 1.19
MUC1-201ENST00000337604 IP6K1Q92551 441 aa22.49■■□□□ 1.19
MUC1-201ENST00000337604 PDGFDQ9GZP0 370 aaPredicted RBP22.49■■□□□ 1.19
MUC1-201ENST00000337604 SPON1Q9HCB6 807 aa22.49■■□□□ 1.19
MUC1-201ENST00000337604 BTAF1O14981 1849 aa22.49■■□□□ 1.19
MUC1-201ENST00000337604 ACSBG1Q96GR2 724 aa22.48■■□□□ 1.19
MUC1-201ENST00000337604 MAP3K19Q56UN5 1328 aa22.48■■□□□ 1.19
MUC1-201ENST00000337604 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
MUC1-201ENST00000337604 FBLN1P23142 703 aa22.47■■□□□ 1.19
MUC1-201ENST00000337604 RGPD2P0DJD1 1756 aa22.46■■□□□ 1.19
MUC1-201ENST00000337604 COG3Q96JB2 828 aa22.45■■□□□ 1.18
MUC1-201ENST00000337604 LTV1Q96GA3 475 aaPredicted RBP22.44■■□□□ 1.18
MUC1-201ENST00000337604 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
MUC1-201ENST00000337604 MYOM1P52179 1685 aa22.43■■□□□ 1.18
MUC1-201ENST00000337604 SLC24A1O60721 1099 aa22.43■■□□□ 1.18
MUC1-201ENST00000337604 HOXC9P31274 260 aa22.43■■□□□ 1.18
MUC1-201ENST00000337604 KAT6BQ8WYB5 2073 aa22.42■■□□□ 1.18
MUC1-201ENST00000337604 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
MUC1-201ENST00000337604 TMF1P82094 1093 aa22.41■■□□□ 1.18
MUC1-201ENST00000337604 MEGF6O75095 1541 aa22.41■■□□□ 1.18
MUC1-201ENST00000337604 RTL1A6NKG5 1358 aa22.4■■□□□ 1.18
MUC1-201ENST00000337604 FYB1O15117 783 aa22.4■■□□□ 1.18
MUC1-201ENST00000337604 SLC15A2Q16348 729 aa22.4■■□□□ 1.18
MUC1-201ENST00000337604 STK32BQ9NY57 414 aa22.4■■□□□ 1.18
MUC1-201ENST00000337604 PPP1R1BQ9UD71 204 aaPredicted RBP22.4■■□□□ 1.18
MUC1-201ENST00000337604 ZBTB7AO95365 584 aa22.39■■□□□ 1.17
MUC1-201ENST00000337604 GGNBP2Q9H3C7 697 aa22.39■■□□□ 1.17
MUC1-201ENST00000337604 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.17
MUC1-201ENST00000337604 PTGER2P43116 358 aa22.38■■□□□ 1.17
MUC1-201ENST00000337604 AMPHP49418 695 aa22.38■■□□□ 1.17
MUC1-201ENST00000337604 RRS1Q15050 365 aaKnown RBP22.38■■□□□ 1.17
MUC1-201ENST00000337604 DDX54Q8TDD1 881 aaKnown RBP22.36■■□□□ 1.17
MUC1-201ENST00000337604 LRRC4BQ9NT99 713 aa22.35■■□□□ 1.17
MUC1-201ENST00000337604 ZNF827Q17R98 1081 aa22.34■■□□□ 1.17
MUC1-201ENST00000337604 NSD2O96028 1365 aa22.34■■□□□ 1.17
MUC1-201ENST00000337604 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
MUC1-201ENST00000337604 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
MUC1-201ENST00000337604 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
MUC1-201ENST00000337604 SGIP1Q9BQI5 828 aa22.32■■□□□ 1.16
MUC1-201ENST00000337604 CARD14Q9BXL6 1004 aa22.32■■□□□ 1.16
MUC1-201ENST00000337604 USHBP1Q8N6Y0 703 aa22.31■■□□□ 1.16
MUC1-201ENST00000337604 LY75O60449 1722 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms