RNA–Protein interactions for RNA: ENST00000335509.10

TPCN1-201, Transcript of two pore segment channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPCN1, Length 5,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-201ENST00000335509 RPAP2Q8IXW5 612 aaPredicted RBP19.03■□□□□ 0.64
TPCN1-201ENST00000335509 STK11IPQ8N1F8 1099 aa19.03■□□□□ 0.64
TPCN1-201ENST00000335509 CWC27Q6UX04 472 aaKnown RBP19.02■□□□□ 0.64
TPCN1-201ENST00000335509 KRT85P78386 507 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 DCTN1Q14203 1278 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 NFE2L2Q16236 605 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 EFCAB5A4FU69 1503 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 TATP17735 454 aaPredicted RBP19.02■□□□□ 0.64
TPCN1-201ENST00000335509 HSP90B2PQ58FF3 399 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
TPCN1-201ENST00000335509 UPF3BQ9BZI7 483 aaKnown RBP19.02■□□□□ 0.63
TPCN1-201ENST00000335509 NSD3Q9BZ95 1437 aa19.02■□□□□ 0.63
TPCN1-201ENST00000335509 ME1P48163 572 aa19.02■□□□□ 0.63
TPCN1-201ENST00000335509 RARSP54136 660 aaKnown RBP19.02■□□□□ 0.63
TPCN1-201ENST00000335509 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.63
TPCN1-201ENST00000335509 PATL2C9JE40 543 aaKnown RBP19.01■□□□□ 0.63
TPCN1-201ENST00000335509 BLOC1S2Q6QNY1 142 aa19.01■□□□□ 0.63
TPCN1-201ENST00000335509 CCDC43Q96MW1 224 aaKnown RBP19.01■□□□□ 0.63
TPCN1-201ENST00000335509 CNNM1Q9NRU3 951 aa19.01■□□□□ 0.63
TPCN1-201ENST00000335509 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
TPCN1-201ENST00000335509 CCDC192P0DO97 292 aa19.01■□□□□ 0.63
TPCN1-201ENST00000335509 AACSQ86V21 672 aa19.01■□□□□ 0.63
TPCN1-201ENST00000335509 CIZ1Q9ULV3 898 aaPredicted RBP19.01■□□□□ 0.63
TPCN1-201ENST00000335509 ANKRD30BQ9BXX2 1392 aa19■□□□□ 0.63
TPCN1-201ENST00000335509 CCDC158Q5M9N0 1113 aa19■□□□□ 0.63
TPCN1-201ENST00000335509 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
TPCN1-201ENST00000335509 HMGN5P82970 282 aaKnown RBP19■□□□□ 0.63
TPCN1-201ENST00000335509 DDX54Q8TDD1 881 aaKnown RBP19■□□□□ 0.63
TPCN1-201ENST00000335509 ZNF396Q96N95 335 aaPredicted RBP19■□□□□ 0.63
TPCN1-201ENST00000335509 TNMDQ9H2S6 317 aa19■□□□□ 0.63
TPCN1-201ENST00000335509 ESPNB1AK53 854 aa18.99■□□□□ 0.63
TPCN1-201ENST00000335509 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
TPCN1-201ENST00000335509 RUFY1Q96T51 708 aa18.99■□□□□ 0.63
TPCN1-201ENST00000335509 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
TPCN1-201ENST00000335509 MCM10Q7L590 875 aa18.99■□□□□ 0.63
TPCN1-201ENST00000335509 ATAD2Q6PL18 1390 aa18.99■□□□□ 0.63
TPCN1-201ENST00000335509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
TPCN1-201ENST00000335509 MAP7D2Q96T17 732 aa18.98■□□□□ 0.63
TPCN1-201ENST00000335509 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
TPCN1-201ENST00000335509 ANKRD1Q15327 319 aa18.97■□□□□ 0.63
TPCN1-201ENST00000335509 MTERF4Q7Z6M4 381 aaKnown RBP18.97■□□□□ 0.63
TPCN1-201ENST00000335509 AEBP1Q8IUX7 1158 aa18.97■□□□□ 0.63
TPCN1-201ENST00000335509 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
TPCN1-201ENST00000335509 TTC39AQ5SRH9 613 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 FERMT3Q86UX7 667 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 NUTM1Q86Y26 1132 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 CABP4P57796 275 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 KIF6Q6ZMV9 814 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
TPCN1-201ENST00000335509 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
TPCN1-201ENST00000335509 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
TPCN1-201ENST00000335509 CDK13Q14004 1512 aaKnown RBP18.96■□□□□ 0.62
TPCN1-201ENST00000335509 JMYQ8N9B5 988 aa18.95■□□□□ 0.62
TPCN1-201ENST00000335509 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
TPCN1-201ENST00000335509 XPCQ01831 940 aaPredicted RBP18.95■□□□□ 0.62
TPCN1-201ENST00000335509 DUSP27Q5VZP5 1158 aa18.95■□□□□ 0.62
TPCN1-201ENST00000335509 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
TPCN1-201ENST00000335509 SERPINC1P01008 464 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 ACBD3Q9H3P7 528 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 CT47A1Q5JQC4 288 aaPredicted RBP18.94■□□□□ 0.62
TPCN1-201ENST00000335509 TOM1L2Q6ZVM7 507 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 FILIP1LQ4L180 1135 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 CCDC85AQ96PX6 553 aaPredicted RBP18.94■□□□□ 0.62
TPCN1-201ENST00000335509 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
TPCN1-201ENST00000335509 EPS15P42566 896 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 CAGE1Q8TC20 777 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 SPATA32Q96LK8 384 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
TPCN1-201ENST00000335509 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
TPCN1-201ENST00000335509 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.621e-6■■■■□ 25.5
TPCN1-201ENST00000335509 SYCE3A1L190 88 aa18.92■□□□□ 0.62
TPCN1-201ENST00000335509 TRIM22Q8IYM9 498 aa18.92■□□□□ 0.62
TPCN1-201ENST00000335509 DDX11Q96FC9 970 aa18.92■□□□□ 0.62
TPCN1-201ENST00000335509 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
TPCN1-201ENST00000335509 F6X3S4 739 aa18.91■□□□□ 0.62
TPCN1-201ENST00000335509 FAM177A1Q8N128 213 aaPredicted RBP18.91■□□□□ 0.62
TPCN1-201ENST00000335509 TXLNAP40222 546 aa18.91■□□□□ 0.62
TPCN1-201ENST00000335509 AK7Q96M32 723 aa18.91■□□□□ 0.62
TPCN1-201ENST00000335509 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
TPCN1-201ENST00000335509 NUP133Q8WUM0 1156 aa18.9■□□□□ 0.62
TPCN1-201ENST00000335509 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
TPCN1-201ENST00000335509 NUP62CLQ9H1M0 184 aa18.9■□□□□ 0.62
TPCN1-201ENST00000335509 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
TPCN1-201ENST00000335509 MX1P20591 662 aa18.89■□□□□ 0.62
TPCN1-201ENST00000335509 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.62
TPCN1-201ENST00000335509 TBC1D2Q9BYX2 928 aa18.89■□□□□ 0.62
TPCN1-201ENST00000335509 NME9Q86XW9 330 aa18.89■□□□□ 0.61
TPCN1-201ENST00000335509 CCDC112Q8NEF3 446 aa18.89■□□□□ 0.61
TPCN1-201ENST00000335509 NACAP1Q9BZK3 213 aa18.89■□□□□ 0.61
TPCN1-201ENST00000335509 TRIM27P14373 513 aa18.89■□□□□ 0.61
TPCN1-201ENST00000335509 ZSCAN31Q96LW9 406 aaPredicted RBP18.89■□□□□ 0.61
TPCN1-201ENST00000335509 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
TPCN1-201ENST00000335509 GNAT3A8MTJ3 354 aa18.88■□□□□ 0.61
TPCN1-201ENST00000335509 ZFYVE27Q5T4F4 411 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms