RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 GLI3P10071 1580 aa25.46■■□□□ 1.67
HLA-F-217ENST00000334668 AATKQ6ZMQ8 1374 aa25.45■■□□□ 1.67
HLA-F-217ENST00000334668 KIF7Q2M1P5 1343 aa25.45■■□□□ 1.66
HLA-F-217ENST00000334668 KIF20BQ96Q89 1820 aa25.45■■□□□ 1.66
HLA-F-217ENST00000334668 SOCS7O14512 581 aa25.45■■□□□ 1.66
HLA-F-217ENST00000334668 FYB1O15117 783 aa25.45■■□□□ 1.66
HLA-F-217ENST00000334668 POLR3GLQ9BT43 218 aa25.44■■□□□ 1.66
HLA-F-217ENST00000334668 NSD3Q9BZ95 1437 aa25.44■■□□□ 1.66
HLA-F-217ENST00000334668 ABCC6O95255 1503 aa25.42■■□□□ 1.66
HLA-F-217ENST00000334668 RGS12O14924 1447 aa25.41■■□□□ 1.66
HLA-F-217ENST00000334668 COG3Q96JB2 828 aa25.41■■□□□ 1.66
HLA-F-217ENST00000334668 LTN1O94822 1766 aa25.41■■□□□ 1.66
HLA-F-217ENST00000334668 RGPD5Q99666 1765 aa25.4■■□□□ 1.66
HLA-F-217ENST00000334668 COL5A2P05997 1499 aaPredicted RBP25.39■■□□□ 1.65
HLA-F-217ENST00000334668 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
HLA-F-217ENST00000334668 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
HLA-F-217ENST00000334668 SOX12O15370 315 aa25.38■■□□□ 1.65
HLA-F-217ENST00000334668 ONECUT3O60422 494 aaPredicted RBP25.38■■□□□ 1.65
HLA-F-217ENST00000334668 PANK3Q9H999 370 aa25.38■■□□□ 1.65
HLA-F-217ENST00000334668 GGNBP2Q9H3C7 697 aa25.37■■□□□ 1.65
HLA-F-217ENST00000334668 AXIN2Q9Y2T1 843 aa25.37■■□□□ 1.65
HLA-F-217ENST00000334668 CCDC7Q96M83 1385 aa25.36■■□□□ 1.65
HLA-F-217ENST00000334668 CGNL1Q0VF96 1302 aa25.35■■□□□ 1.65
HLA-F-217ENST00000334668 WASHC2AQ641Q2 1341 aa25.35■■□□□ 1.65
HLA-F-217ENST00000334668 STRN4Q9NRL3 753 aa25.34■■□□□ 1.65
HLA-F-217ENST00000334668 CCDC9Q9Y3X0 531 aaKnown RBP25.34■■□□□ 1.65
HLA-F-217ENST00000334668 SPATA31A1Q5TZJ5 1347 aa25.34■■□□□ 1.65
HLA-F-217ENST00000334668 ZBTB7CA1YPR0 619 aa25.33■■□□□ 1.65
HLA-F-217ENST00000334668 EVA1CP58658 441 aa25.33■■□□□ 1.65
HLA-F-217ENST00000334668 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
HLA-F-217ENST00000334668 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
HLA-F-217ENST00000334668 DSG3P32926 999 aa25.31■■□□□ 1.64
HLA-F-217ENST00000334668 BRWD3Q6RI45 1802 aa25.3■■□□□ 1.64
HLA-F-217ENST00000334668 ZEB1P37275 1124 aaPredicted RBP25.29■■□□□ 1.64
HLA-F-217ENST00000334668 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
HLA-F-217ENST00000334668 CRB1P82279 1406 aa25.29■■□□□ 1.64
HLA-F-217ENST00000334668 FBLN1P23142 703 aa25.28■■□□□ 1.64
HLA-F-217ENST00000334668 IP6K1Q92551 441 aa25.28■■□□□ 1.64
HLA-F-217ENST00000334668 MAP3K19Q56UN5 1328 aa25.28■■□□□ 1.64
HLA-F-217ENST00000334668 WDR17Q8IZU2 1322 aa25.28■■□□□ 1.64
HLA-F-217ENST00000334668 EP400Q96L91 3159 aa25.28■■□□□ 1.64
HLA-F-217ENST00000334668 FAM98CQ17RN3 349 aaKnown RBP25.27■■□□□ 1.64
HLA-F-217ENST00000334668 SEPT12Q8IYM1 358 aa25.27■■□□□ 1.64
HLA-F-217ENST00000334668 BARGINQ6ZT62 677 aa25.26■■□□□ 1.63
HLA-F-217ENST00000334668 NSD2O96028 1365 aa25.26■■□□□ 1.63
HLA-F-217ENST00000334668 BLMP54132 1417 aaPredicted RBP25.26■■□□□ 1.63
HLA-F-217ENST00000334668 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
HLA-F-217ENST00000334668 THRAP3Q9Y2W1 955 aaKnown RBP25.25■■□□□ 1.63
HLA-F-217ENST00000334668 MAP2P11137 1827 aaKnown RBP25.25■■□□□ 1.63
HLA-F-217ENST00000334668 RTL1A6NKG5 1358 aa25.24■■□□□ 1.63
HLA-F-217ENST00000334668 ERBB3P21860 1342 aa25.24■■□□□ 1.63
HLA-F-217ENST00000334668 TCP11L2Q8N4U5 519 aa25.24■■□□□ 1.63
HLA-F-217ENST00000334668 KNSTRNQ9Y448 316 aa25.24■■□□□ 1.63
HLA-F-217ENST00000334668 RRS1Q15050 365 aaKnown RBP25.23■■□□□ 1.63
HLA-F-217ENST00000334668 KIF24Q5T7B8 1368 aa25.22■■□□□ 1.63
HLA-F-217ENST00000334668 HOXC9P31274 260 aa25.22■■□□□ 1.63
HLA-F-217ENST00000334668 AMER1Q5JTC6 1135 aaPredicted RBP25.22■■□□□ 1.63
HLA-F-217ENST00000334668 SAMD1Q6SPF0 538 aaPredicted RBP25.22■■□□□ 1.63
HLA-F-217ENST00000334668 PEAK1Q9H792 1746 aa25.21■■□□□ 1.63
HLA-F-217ENST00000334668 TOM1L2Q6ZVM7 507 aa25.21■■□□□ 1.63
HLA-F-217ENST00000334668 CARD10Q9BWT7 1032 aa25.21■■□□□ 1.63
HLA-F-217ENST00000334668 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
HLA-F-217ENST00000334668 AMPHP49418 695 aa25.2■■□□□ 1.62
HLA-F-217ENST00000334668 WNK3Q9BYP7 1800 aa25.2■■□□□ 1.62
HLA-F-217ENST00000334668 ANKRD24Q8TF21 1146 aa25.19■■□□□ 1.62
HLA-F-217ENST00000334668 FAM208AQ9UK61 1670 aaKnown RBP25.19■■□□□ 1.62
HLA-F-217ENST00000334668 PARP4Q9UKK3 1724 aaKnown RBP25.18■■□□□ 1.62
HLA-F-217ENST00000334668 CSB-PGBD3P0DP91 1061 aa25.18■■□□□ 1.62
HLA-F-217ENST00000334668 FLT4P35916 1363 aa25.17■■□□□ 1.62
HLA-F-217ENST00000334668 KRT27Q7Z3Y8 459 aa25.16■■□□□ 1.62
HLA-F-217ENST00000334668 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
HLA-F-217ENST00000334668 MYCNP04198 464 aaPredicted RBP25.15■■□□□ 1.62
HLA-F-217ENST00000334668 UPF1Q92900 1129 aaKnown RBP eCLIP25.15■■□□□ 1.62
HLA-F-217ENST00000334668 POLKQ9UBT6 870 aa25.15■■□□□ 1.62
HLA-F-217ENST00000334668 EMILIN1Q9Y6C2 1016 aa25.15■■□□□ 1.62
HLA-F-217ENST00000334668 INSRP06213 1382 aa25.15■■□□□ 1.62
HLA-F-217ENST00000334668 DISP2A7MBM2 1401 aa25.14■■□□□ 1.62
HLA-F-217ENST00000334668 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
HLA-F-217ENST00000334668 A0A0G2JS52 829 aa25.13■■□□□ 1.61
HLA-F-217ENST00000334668 MYT1Q01538 1121 aa25.13■■□□□ 1.61
HLA-F-217ENST00000334668 HSP90AB2PQ58FF8 381 aa25.12■■□□□ 1.61
HLA-F-217ENST00000334668 MORC1Q86VD1 984 aa25.12■■□□□ 1.61
HLA-F-217ENST00000334668 CDCA7Q9BWT1 371 aaPredicted RBP25.12■■□□□ 1.61
HLA-F-217ENST00000334668 NLRP2Q9NX02 1062 aa25.12■■□□□ 1.61
HLA-F-217ENST00000334668 SMG6Q86US8 1419 aaKnown RBP25.11■■□□□ 1.61
HLA-F-217ENST00000334668 ZNF219Q9P2Y4 722 aaPredicted RBP25.1■■□□□ 1.61
HLA-F-217ENST00000334668 LRRC37A3O60309 1634 aa25.1■■□□□ 1.61
HLA-F-217ENST00000334668 TNNT2P45379 298 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-217ENST00000334668 LTV1Q96GA3 475 aaPredicted RBP25.09■■□□□ 1.61
HLA-F-217ENST00000334668 PPM1GO15355 546 aaPredicted RBP25.04■■□□□ 1.6
HLA-F-217ENST00000334668 NBPF6Q5VWK0 638 aa25.04■■□□□ 1.6
HLA-F-217ENST00000334668 NBPF4Q96M43 638 aa25.04■■□□□ 1.6
HLA-F-217ENST00000334668 IL2RBP14784 551 aa25.03■■□□□ 1.6
HLA-F-217ENST00000334668 PDE3BQ13370 1112 aa25.03■■□□□ 1.6
HLA-F-217ENST00000334668 DDB1Q16531 1140 aa25.03■■□□□ 1.6
HLA-F-217ENST00000334668 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
HLA-F-217ENST00000334668 FOXD4L1Q9NU39 408 aa25.03■■□□□ 1.6
HLA-F-217ENST00000334668 NCAPD2Q15021 1401 aa25.03■■□□□ 1.6
HLA-F-217ENST00000334668 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
HLA-F-217ENST00000334668 FAM182BQ5T319 152 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms